Gene annotation
Transcriptome id Sobic.002G079900.1
Synonym
Functional annotation tryptophan/tyrosine permease family protein, putative, expressed
UniProt A0A1W0W2Z7
Pfam PF01490
Panther DB PTHR32195 PTHR32195:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33260 : Tryptophan/tyrosine permease
RAP-DB (Rice) LOC_Os07g12330.3 : tryptophan/tyrosine permease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a045430
Brachypodium PNT76808 , KQK20320 , PNT76807 , PNT76806 , PNT76805 , PNT76804
Barley HORVU4Hr1G068690.9 , HORVU4Hr1G068690.8 , HORVU4Hr1G068690.1 , HORVU4Hr1G068690.2 , HORVU4Hr1G068690.5 , HORVU4Hr1G068690.4 , HORVU4Hr1G068690.6 , HORVU4Hr1G068690.3 , HORVU4Hr1G068690.7 , HORVU4Hr1G068690.15 , HORVU4Hr1G068690.14 , HORVU4Hr1G068690.11 , HORVU4Hr1G068690.10 , HORVU4Hr1G068690.13 , HORVU4Hr1G068690.12
Wheat TraesCS4A02G055300 , TraesCS4D02G249600 , TraesCS4B02G249300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
2 Sobic.002G054000 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
3 Sobic.004G036800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
4 Sobic.001G363000 uncharacterized protein HI0077, putative, expressed -
5 Sobic.001G501600 acetyltransferase, GNAT family, putative, expressed -
6 Sobic.002G347400 expressed protein -
7 Sobic.010G277000 exosome complex exonuclease, putative, expressed K12589: RRP42, exosome complex component RRP42
8 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
9 Sobic.004G343600 3-5 exoribonuclease CSL4, putative, expressed K07573: CSL4, exosome complex component CSL4
10 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
11 Sobic.004G077900 YIF1B, putative, expressed -
12 Sobic.008G040300 RNASEH2A - Putative ribonuclease H2 large subunit, expressed K10743: ribonuclease H2 subunit A
13 Sobic.001G412500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K18732: SARNP, CIP29, SAP domain-containing ribonucleoprotein
14 Sobic.002G136600 expressed protein -
15 Sobic.005G164700 h/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed K11128: GAR1, H/ACA ribonucleoprotein complex subunit 1
16 Sobic.001G162800 expressed protein -
17 Sobic.001G026600 - -
18 Sobic.007G022500 RNA recognition motif containing protein, putative, expressed K03248: translation initiation factor 3 subunit G
19 Sobic.010G082850 - -
20 Sobic.001G336050 - K18635: protein SPIRAL1 and related proteins


Gene co-expression network
sample Sobic002G079900 Sobic002G079900 Sobic001G107200 Sobic001G107200 Sobic002G079900--Sobic001G107200 Sobic002G054000 Sobic002G054000 Sobic002G079900--Sobic002G054000 Sobic004G036800 Sobic004G036800 Sobic002G079900--Sobic004G036800 Sobic001G363000 Sobic001G363000 Sobic002G079900--Sobic001G363000 Sobic001G501600 Sobic001G501600 Sobic002G079900--Sobic001G501600 Sobic002G347400 Sobic002G347400 Sobic002G079900--Sobic002G347400 Sobic010G277000 Sobic010G277000 Sobic002G079900--Sobic010G277000 Sobic003G084300 Sobic003G084300 Sobic002G079900--Sobic003G084300 Sobic004G343600 Sobic004G343600 Sobic002G079900--Sobic004G343600 Sobic001G528600 Sobic001G528600 Sobic001G107200--Sobic001G528600 Sobic006G191700 Sobic006G191700 Sobic001G107200--Sobic006G191700 Sobic001G107100 Sobic001G107100 Sobic001G107200--Sobic001G107100 Sobic002G350400 Sobic002G350400 Sobic001G107200--Sobic002G350400 Sobic005G047100 Sobic005G047100 Sobic001G107200--Sobic005G047100 Sobic007G094400 Sobic007G094400 Sobic001G107200--Sobic007G094400 Sobic003G250700 Sobic003G250700 Sobic001G107200--Sobic003G250700 Sobic003G011100 Sobic003G011100 Sobic001G107200--Sobic003G011100 Sobic006G278100 Sobic006G278100 Sobic001G107200--Sobic006G278100 Sobic008G135000 Sobic008G135000 Sobic002G054000--Sobic008G135000 Sobic009G233400 Sobic009G233400 Sobic002G054000--Sobic009G233400 Sobic001G058900 Sobic001G058900 Sobic002G054000--Sobic001G058900 Sobic005G050500 Sobic005G050500 Sobic002G054000--Sobic005G050500 Sobic001G334300 Sobic001G334300 Sobic002G054000--Sobic001G334300 Sobic002G304900 Sobic002G304900 Sobic002G054000--Sobic002G304900 Sobic004G342400 Sobic004G342400 Sobic002G054000--Sobic004G342400 Sobic009G191200 Sobic009G191200 Sobic002G054000--Sobic009G191200 Sobic010G005300 Sobic010G005300 Sobic002G054000--Sobic010G005300 Sobic004G036800--Sobic004G343600 Sobic001G468500 Sobic001G468500 Sobic004G036800--Sobic001G468500 Sobic006G133700 Sobic006G133700 Sobic004G036800--Sobic006G133700 Sobic001G412500 Sobic001G412500 Sobic004G036800--Sobic001G412500 Sobic007G129000 Sobic007G129000 Sobic004G036800--Sobic007G129000 Sobic010G256200 Sobic010G256200 Sobic004G036800--Sobic010G256200 Sobic001G369800 Sobic001G369800 Sobic004G036800--Sobic001G369800 Sobic001G040300 Sobic001G040300 Sobic004G036800--Sobic001G040300 Sobic010G265900 Sobic010G265900 Sobic004G036800--Sobic010G265900 Sobic005G164700 Sobic005G164700 Sobic001G363000--Sobic005G164700 Sobic007G143000 Sobic007G143000 Sobic001G363000--Sobic007G143000 Sobic001G363000--Sobic002G079900 Sobic003G401400 Sobic003G401400 Sobic001G363000--Sobic003G401400 Sobic001G451901 Sobic001G451901 Sobic001G363000--Sobic001G451901 Sobic007G034400 Sobic007G034400 Sobic001G363000--Sobic007G034400 Sobic003G128000 Sobic003G128000 Sobic001G363000--Sobic003G128000 Sobic005G132700 Sobic005G132700 Sobic001G363000--Sobic005G132700 Sobic001G214900 Sobic001G214900 Sobic001G363000--Sobic001G214900 Sobic001G370700 Sobic001G370700 Sobic001G501600--Sobic001G370700 Sobic006G013000 Sobic006G013000 Sobic001G501600--Sobic006G013000 Sobic007G161700 Sobic007G161700 Sobic001G501600--Sobic007G161700 Sobic003G261100 Sobic003G261100 Sobic001G501600--Sobic003G261100 Sobic002G180300 Sobic002G180300 Sobic001G501600--Sobic002G180300 Sobic007G134900 Sobic007G134900 Sobic001G501600--Sobic007G134900 Sobic002G296200 Sobic002G296200 Sobic001G501600--Sobic002G296200 Sobic004G056400 Sobic004G056400 Sobic001G501600--Sobic004G056400 Sobic010G089500 Sobic010G089500 Sobic001G501600--Sobic010G089500 Sobic007G173000 Sobic007G173000 Sobic002G347400--Sobic007G173000 Sobic001G146000 Sobic001G146000 Sobic002G347400--Sobic001G146000 Sobic008G084100 Sobic008G084100 Sobic002G347400--Sobic008G084100 Sobic003G394100 Sobic003G394100 Sobic002G347400--Sobic003G394100 Sobic002G347400--Sobic010G277000 Sobic004G203900 Sobic004G203900 Sobic002G347400--Sobic004G203900 Sobic002G347400--Sobic001G107200 Sobic003G442300 Sobic003G442300 Sobic002G347400--Sobic003G442300 Sobic001G051300 Sobic001G051300 Sobic002G347400--Sobic001G051300 Sobic010G277000--Sobic008G084100 Sobic007G191600 Sobic007G191600 Sobic010G277000--Sobic007G191600 Sobic001G035400 Sobic001G035400 Sobic010G277000--Sobic001G035400 Sobic010G277000--Sobic001G214900 Sobic003G238500 Sobic003G238500 Sobic010G277000--Sobic003G238500 Sobic001G026600 Sobic001G026600 Sobic010G277000--Sobic001G026600 Sobic010G277000--Sobic002G054000 Sobic003G205400 Sobic003G205400 Sobic010G277000--Sobic003G205400 Sobic005G027300 Sobic005G027300 Sobic010G277000--Sobic005G027300 Sobic001G157800 Sobic001G157800 Sobic003G084300--Sobic001G157800 Sobic009G165500 Sobic009G165500 Sobic003G084300--Sobic009G165500 Sobic009G189200 Sobic009G189200 Sobic003G084300--Sobic009G189200 Sobic003G084300--Sobic003G011100 Sobic002G385400 Sobic002G385400 Sobic003G084300--Sobic002G385400 Sobic003G084300--Sobic010G265900 Sobic002G258300 Sobic002G258300 Sobic003G084300--Sobic002G258300 Sobic006G200000 Sobic006G200000 Sobic003G084300--Sobic006G200000 Sobic006G102900 Sobic006G102900 Sobic003G084300--Sobic006G102900 Sobic001G107300 Sobic001G107300 Sobic004G343600--Sobic001G107300 Sobic002G386300 Sobic002G386300 Sobic004G343600--Sobic002G386300 Sobic006G013900 Sobic006G013900 Sobic004G343600--Sobic006G013900 Sobic010G032700 Sobic010G032700 Sobic004G343600--Sobic010G032700 Sobic004G343600--Sobic004G036800 Sobic001G436300 Sobic001G436300 Sobic004G343600--Sobic001G436300 Sobic006G127500 Sobic006G127500 Sobic004G343600--Sobic006G127500 Sobic004G343600--Sobic001G412500 Sobic002G184900 Sobic002G184900 Sobic004G343600--Sobic002G184900
Octagon: transcription factors


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