Gene annotation
Transcriptome id Sobic.002G136300.1
Synonym Sb02g012330
Functional annotation calmodulin-binding heat-shock protein, putative, expressed
UniProt C5X601
Pfam PF03893 PF01764
Panther DB PTHR21493 PTHR21493:SF128
NCBI CDD KOG2088; Predicted lipase/calmodulin-binding heat-shock protein
KEGG Orthology -
Gene Ontology GO:0016042; lipid catabolic process GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT3G49050 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g14490.2 : calmodulin-binding heat-shock protein, putative, expressed
MaizeGDB (Corn) Zm00025a013488
Brachypodium PNT65202 , KQK02327
Barley HORVU4Hr1G003350.1 , HORVU1Hr1G035630.1 , HORVU5Hr1G000220.1 , HORVU5Hr1G014520.1 , HORVU4Hr1G000290.18 , HORVU4Hr1G000290.16 , HORVU4Hr1G000290.14 , HORVU4Hr1G000290.13 , HORVU4Hr1G000290.12 , HORVU4Hr1G000290.11 , HORVU7Hr1G075270.1 , HORVU4Hr1G000290.7 , HORVU4Hr1G000290.5 , HORVU4Hr1G000290.4 , HORVU4Hr1G000290.3 , HORVU4Hr1G000290.1 , HORVU4Hr1G000290.9 , HORVU4Hr1G000290.8 , HORVU4Hr1G000290.17 , HORVU4Hr1G000290.15 , HORVU4Hr1G000290.2
Wheat TraesCS3A02G153200 , TraesCS1B02G284800 , TraesCS4A02G308400 , TraesCS4B02G006200 , TraesCS4B02G006200 , TraesCS4D02G005900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G134600 pentatricopeptide, putative, expressed -
2 Sobic.001G069300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.008G082800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.001G478900 pentatricopeptide, putative, expressed -
5 Sobic.002G358900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat domain containing protein, putative, expressed -
6 Sobic.002G138300 expressed protein -
7 Sobic.003G184300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.007G082200 white-brown complex homolog protein 11, putative, expressed -
9 Sobic.004G025700 PPR repeat domain containing protein, putative, expressed -
10 Sobic.005G123400 expressed protein -
11 Sobic.001G486900 exostosin family protein, putative, expressed -
12 Sobic.004G185500 extracellular ligand-gated ion channel, putative, expressed -
13 Sobic.010G134650 - -
14 Sobic.003G359400 PPR repeat containing protein, expressed -
15 Sobic.002G172500 tetratricopeptide-like helical, putative, expressed -
16 Sobic.008G100300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat domain containing protein, expressed -
17 Sobic.006G054233 - -
18 Sobic.004G051600 EMB2758, putative, expressed -
19 Sobic.001G052100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
20 Sobic.010G068900 glutamate receptor 2.6 precursor, putative, expressed K05387: glutamate receptor, ionotropic, plant


Gene co-expression network
sample Sobic002G136300 Sobic002G136300 Sobic010G134600 Sobic010G134600 Sobic002G136300--Sobic010G134600 Sobic001G069300 Sobic001G069300 Sobic002G136300--Sobic001G069300 Sobic008G082800 Sobic008G082800 Sobic002G136300--Sobic008G082800 Sobic001G478900 Sobic001G478900 Sobic002G136300--Sobic001G478900 Sobic002G358900 Sobic002G358900 Sobic002G136300--Sobic002G358900 Sobic002G138300 Sobic002G138300 Sobic002G136300--Sobic002G138300 Sobic003G184300 Sobic003G184300 Sobic002G136300--Sobic003G184300 Sobic007G082200 Sobic007G082200 Sobic002G136300--Sobic007G082200 Sobic004G025700 Sobic004G025700 Sobic002G136300--Sobic004G025700 Sobic010G134650 Sobic010G134650 Sobic010G134600--Sobic010G134650 Sobic006G054233 Sobic006G054233 Sobic010G134600--Sobic006G054233 Sobic009G252300 Sobic009G252300 Sobic010G134600--Sobic009G252300 Sobic007G069101 Sobic007G069101 Sobic010G134600--Sobic007G069101 Sobic002G054200 Sobic002G054200 Sobic010G134600--Sobic002G054200 Sobic010G277700 Sobic010G277700 Sobic010G134600--Sobic010G277700 Sobic001G257800 Sobic001G257800 Sobic010G134600--Sobic001G257800 Sobic001G065200 Sobic001G065200 Sobic010G134600--Sobic001G065200 Sobic010G112600 Sobic010G112600 Sobic010G134600--Sobic010G112600 Sobic002G257600 Sobic002G257600 Sobic001G069300--Sobic002G257600 Sobic001G069300--Sobic002G136300 Sobic003G203100 Sobic003G203100 Sobic001G069300--Sobic003G203100 Sobic001G069300--Sobic002G358900 Sobic004G312000 Sobic004G312000 Sobic001G069300--Sobic004G312000 Sobic004G046001 Sobic004G046001 Sobic001G069300--Sobic004G046001 Sobic005G124850 Sobic005G124850 Sobic001G069300--Sobic005G124850 Sobic002G037900 Sobic002G037900 Sobic001G069300--Sobic002G037900 Sobic004G346200 Sobic004G346200 Sobic001G069300--Sobic004G346200 Sobic002G172500 Sobic002G172500 Sobic008G082800--Sobic002G172500 Sobic004G256900 Sobic004G256900 Sobic008G082800--Sobic004G256900 Sobic008G082800--Sobic001G478900 Sobic008G082800--Sobic003G184300 Sobic010G068900 Sobic010G068900 Sobic008G082800--Sobic010G068900 Sobic009G155400 Sobic009G155400 Sobic008G082800--Sobic009G155400 Sobic006G085900 Sobic006G085900 Sobic008G082800--Sobic006G085900 Sobic009G063500 Sobic009G063500 Sobic008G082800--Sobic009G063500 Sobic006G262800 Sobic006G262800 Sobic008G082800--Sobic006G262800 Sobic008G095900 Sobic008G095900 Sobic001G478900--Sobic008G095900 Sobic001G478900--Sobic006G262800 Sobic001G478900--Sobic004G256900 Sobic001G478900--Sobic003G184300 Sobic009G047700 Sobic009G047700 Sobic001G478900--Sobic009G047700 Sobic004G051600 Sobic004G051600 Sobic001G478900--Sobic004G051600 Sobic001G478900--Sobic010G068900 Sobic009G253101 Sobic009G253101 Sobic001G478900--Sobic009G253101 Sobic010G123100 Sobic010G123100 Sobic001G478900--Sobic010G123100 Sobic005G110550 Sobic005G110550 Sobic002G358900--Sobic005G110550 Sobic002G358900--Sobic002G037900 Sobic004G199400 Sobic004G199400 Sobic002G358900--Sobic004G199400 Sobic001G491700 Sobic001G491700 Sobic002G358900--Sobic001G491700 Sobic009G205000 Sobic009G205000 Sobic002G358900--Sobic009G205000 Sobic005G024600 Sobic005G024600 Sobic002G358900--Sobic005G024600 Sobic006G085800 Sobic006G085800 Sobic002G358900--Sobic006G085800 Sobic002G358900--Sobic010G123100 Sobic003G399900 Sobic003G399900 Sobic002G358900--Sobic003G399900 Sobic001G032200 Sobic001G032200 Sobic002G138300--Sobic001G032200 Sobic006G162400 Sobic006G162400 Sobic002G138300--Sobic006G162400 Sobic009G260700 Sobic009G260700 Sobic002G138300--Sobic009G260700 Sobic006G000900 Sobic006G000900 Sobic002G138300--Sobic006G000900 Sobic006G170900 Sobic006G170900 Sobic002G138300--Sobic006G170900 Sobic006G103700 Sobic006G103700 Sobic002G138300--Sobic006G103700 Sobic010G274800 Sobic010G274800 Sobic002G138300--Sobic010G274800 Sobic004G162500 Sobic004G162500 Sobic002G138300--Sobic004G162500 Sobic003G044300 Sobic003G044300 Sobic002G138300--Sobic003G044300 Sobic003G184300--Sobic004G256900 Sobic006G095000 Sobic006G095000 Sobic003G184300--Sobic006G095000 Sobic002G192900 Sobic002G192900 Sobic003G184300--Sobic002G192900 Sobic001G361200 Sobic001G361200 Sobic003G184300--Sobic001G361200 Sobic003G184300--Sobic001G478900 Sobic003G184300--Sobic010G068900 Sobic003G184300--Sobic002G172500 Sobic010G188900 Sobic010G188900 Sobic003G184300--Sobic010G188900 Sobic004G064600 Sobic004G064600 Sobic003G184300--Sobic004G064600 Sobic006G239700 Sobic006G239700 Sobic007G082200--Sobic006G239700 Sobic010G146000 Sobic010G146000 Sobic007G082200--Sobic010G146000 Sobic008G100300 Sobic008G100300 Sobic007G082200--Sobic008G100300 Sobic007G082200--Sobic001G065200 Sobic001G444900 Sobic001G444900 Sobic007G082200--Sobic001G444900 Sobic003G091600 Sobic003G091600 Sobic007G082200--Sobic003G091600 Sobic004G011900 Sobic004G011900 Sobic007G082200--Sobic004G011900 Sobic008G036600 Sobic008G036600 Sobic007G082200--Sobic008G036600 Sobic004G189000 Sobic004G189000 Sobic007G082200--Sobic004G189000 Sobic003G394500 Sobic003G394500 Sobic004G025700--Sobic003G394500 Sobic004G025700--Sobic008G095900 Sobic006G191000 Sobic006G191000 Sobic004G025700--Sobic006G191000 Sobic010G086300 Sobic010G086300 Sobic004G025700--Sobic010G086300 Sobic007G226800 Sobic007G226800 Sobic004G025700--Sobic007G226800 Sobic001G486900 Sobic001G486900 Sobic004G025700--Sobic001G486900 Sobic004G025700--Sobic010G112600 Sobic002G400151 Sobic002G400151 Sobic004G025700--Sobic002G400151 Sobic004G194400 Sobic004G194400 Sobic004G025700--Sobic004G194400
Octagon: transcription factors


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