Gene annotation
Transcriptome id Sobic.002G230301.1
Synonym -
Functional annotation -
UniProt A0A1W0W5L1
Pfam PF03479
Panther DB PTHR31100 PTHR31100:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G49700 : Predicted AT-hook DNA-binding family protein
RAP-DB (Rice) LOC_Os09g28930.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a047312 , Zm00025a014098 , Zm00025a034453 , Zm00025a050111 , Zm00025a001794 , Zm00025a019952
Brachypodium KQJ90567 , KQK17622
Barley HORVU6Hr1G091740.1 , HORVU6Hr1G091740.3 , HORVU6Hr1G091740.2
Wheat TraesCS2D02G017800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G007200 aquaporin protein, putative, expressed K09873: aquaporin TIP
2 Sobic.003G230000 serine/threonine-protein kinase, putative, expressed -
3 Sobic.002G227900 gibberellin receptor GID1L2, putative, expressed -
4 Sobic.001G079900 expressed protein -
5 Sobic.001G227700 expressed protein -
6 Sobic.009G131200 expressed protein -
7 Sobic.003G401900 CRP6 - Cysteine-rich family protein precursor, expressed -
8 Sobic.010G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G307200 expressed protein -
10 Sobic.004G052800 DUF640 domain containing protein, putative, expressed -
11 Sobic.001G133300 LTPL90 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
12 Sobic.008G034200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
13 Sobic.003G084100 expressed protein -
14 Sobic.004G063600 CYPRO4, putative, expressed -
15 Sobic.003G302000 expressed protein -
16 Sobic.001G400200 OsFBX436 - F-box domain containing protein, expressed -
17 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
18 Sobic.009G158900 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.001G158300 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
20 Sobic.005G168400 expressed protein -


Gene co-expression network
sample Sobic002G230301 Sobic002G230301 Sobic003G007200 Sobic003G007200 Sobic002G230301--Sobic003G007200 Sobic003G230000 Sobic003G230000 Sobic002G230301--Sobic003G230000 Sobic002G227900 Sobic002G227900 Sobic002G230301--Sobic002G227900 Sobic001G079900 Sobic001G079900 Sobic002G230301--Sobic001G079900 Sobic001G227700 Sobic001G227700 Sobic002G230301--Sobic001G227700 Sobic009G131200 Sobic009G131200 Sobic002G230301--Sobic009G131200 Sobic003G401900 Sobic003G401900 Sobic002G230301--Sobic003G401900 Sobic010G215800 Sobic010G215800 Sobic002G230301--Sobic010G215800 Sobic003G307200 Sobic003G307200 Sobic002G230301--Sobic003G307200 Sobic003G343200 Sobic003G343200 Sobic003G007200--Sobic003G343200 Sobic001G128200 Sobic001G128200 Sobic003G007200--Sobic001G128200 Sobic006G236800 Sobic006G236800 Sobic003G007200--Sobic006G236800 Sobic010G222800 Sobic010G222800 Sobic003G007200--Sobic010G222800 Sobic003G411700 Sobic003G411700 Sobic003G007200--Sobic003G411700 Sobic002G374200 Sobic002G374200 Sobic003G007200--Sobic002G374200 Sobic006G272800 Sobic006G272800 Sobic003G007200--Sobic006G272800 Sobic007G017100 Sobic007G017100 Sobic003G007200--Sobic007G017100 Sobic001G425200 Sobic001G425200 Sobic003G007200--Sobic001G425200 Sobic003G230000--Sobic002G227900 Sobic003G230000--Sobic003G307200 Sobic001G493900 Sobic001G493900 Sobic003G230000--Sobic001G493900 Sobic004G267600 Sobic004G267600 Sobic003G230000--Sobic004G267600 Sobic002G394500 Sobic002G394500 Sobic003G230000--Sobic002G394500 Sobic002G360500 Sobic002G360500 Sobic003G230000--Sobic002G360500 Sobic001G199400 Sobic001G199400 Sobic003G230000--Sobic001G199400 Sobic006G219500 Sobic006G219500 Sobic003G230000--Sobic006G219500 Sobic001G231200 Sobic001G231200 Sobic003G230000--Sobic001G231200 Sobic002G227900--Sobic003G230000 Sobic002G227900--Sobic002G394500 Sobic001G473500 Sobic001G473500 Sobic002G227900--Sobic001G473500 Sobic004G313200 Sobic004G313200 Sobic002G227900--Sobic004G313200 Sobic001G393200 Sobic001G393200 Sobic002G227900--Sobic001G393200 Sobic007G180200 Sobic007G180200 Sobic002G227900--Sobic007G180200 Sobic002G227900--Sobic006G219500 Sobic001G155700 Sobic001G155700 Sobic002G227900--Sobic001G155700 Sobic002G227900--Sobic003G307200 Sobic005G032600 Sobic005G032600 Sobic001G079900--Sobic005G032600 Sobic001G384700 Sobic001G384700 Sobic001G079900--Sobic001G384700 Sobic005G062600 Sobic005G062600 Sobic001G079900--Sobic005G062600 Sobic002G050700 Sobic002G050700 Sobic001G079900--Sobic002G050700 Sobic003G351900 Sobic003G351900 Sobic001G079900--Sobic003G351900 Sobic001G079900--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic001G079900--Sobic008G151600 Sobic002G027600 Sobic002G027600 Sobic001G079900--Sobic002G027600 Sobic009G141700 Sobic009G141700 Sobic001G079900--Sobic009G141700 Sobic001G175100 Sobic001G175100 Sobic001G227700--Sobic001G175100 Sobic004G003700 Sobic004G003700 Sobic001G227700--Sobic004G003700 Sobic009G058100 Sobic009G058100 Sobic001G227700--Sobic009G058100 Sobic001G443600 Sobic001G443600 Sobic001G227700--Sobic001G443600 Sobic006G232900 Sobic006G232900 Sobic001G227700--Sobic006G232900 Sobic005G168400 Sobic005G168400 Sobic001G227700--Sobic005G168400 Sobic007G147200 Sobic007G147200 Sobic001G227700--Sobic007G147200 Sobic004G237000 Sobic004G237000 Sobic001G227700--Sobic004G237000 Sobic001G143400 Sobic001G143400 Sobic001G227700--Sobic001G143400 Sobic009G125800 Sobic009G125800 Sobic009G131200--Sobic009G125800 Sobic008G004900 Sobic008G004900 Sobic009G131200--Sobic008G004900 Sobic001G082800 Sobic001G082800 Sobic009G131200--Sobic001G082800 Sobic009G136000 Sobic009G136000 Sobic009G131200--Sobic009G136000 Sobic004G063600 Sobic004G063600 Sobic009G131200--Sobic004G063600 Sobic004G117400 Sobic004G117400 Sobic009G131200--Sobic004G117400 Sobic009G131200--Sobic009G058100 Sobic001G069700 Sobic001G069700 Sobic009G131200--Sobic001G069700 Sobic010G009700 Sobic010G009700 Sobic009G131200--Sobic010G009700 Sobic003G401900--Sobic003G230000 Sobic003G401900--Sobic004G267600 Sobic009G157600 Sobic009G157600 Sobic003G401900--Sobic009G157600 Sobic003G401900--Sobic001G493900 Sobic002G284100 Sobic002G284100 Sobic003G401900--Sobic002G284100 Sobic001G158300 Sobic001G158300 Sobic003G401900--Sobic001G158300 Sobic008G088800 Sobic008G088800 Sobic003G401900--Sobic008G088800 Sobic001G496400 Sobic001G496400 Sobic003G401900--Sobic001G496400 Sobic010G086000 Sobic010G086000 Sobic003G401900--Sobic010G086000 Sobic010G222100 Sobic010G222100 Sobic010G215800--Sobic010G222100 Sobic002G289800 Sobic002G289800 Sobic010G215800--Sobic002G289800 Sobic010G239400 Sobic010G239400 Sobic010G215800--Sobic010G239400 Sobic001G439100 Sobic001G439100 Sobic010G215800--Sobic001G439100 Sobic002G039100 Sobic002G039100 Sobic010G215800--Sobic002G039100 Sobic003G279100 Sobic003G279100 Sobic010G215800--Sobic003G279100 Sobic005G129700 Sobic005G129700 Sobic010G215800--Sobic005G129700 Sobic009G033800 Sobic009G033800 Sobic010G215800--Sobic009G033800 Sobic001G505000 Sobic001G505000 Sobic010G215800--Sobic001G505000 Sobic002G319300 Sobic002G319300 Sobic003G307200--Sobic002G319300 Sobic003G307200--Sobic002G360500 Sobic003G307200--Sobic001G493900 Sobic002G417000 Sobic002G417000 Sobic003G307200--Sobic002G417000 Sobic003G307200--Sobic001G155700 Sobic006G221800 Sobic006G221800 Sobic003G307200--Sobic006G221800 Sobic002G074000 Sobic002G074000 Sobic003G307200--Sobic002G074000 Sobic001G518000 Sobic001G518000 Sobic003G307200--Sobic001G518000 Sobic001G379900 Sobic001G379900 Sobic003G307200--Sobic001G379900
Octagon: transcription factors


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