Gene annotation
Transcriptome id Sobic.001G400200.1
Synonym Sb01g037880
Functional annotation OsFBX436 - F-box domain containing protein, expressed
UniProt A0A1Z5S9X0
Pfam PF08268 PF00646
Panther DB PTHR32133 PTHR32133:SF91
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G12560 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os12g03440.1 : OsFBX436 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002083 , Zm00025a002082 , Zm00025a002081
Brachypodium PNT63122
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G400200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G529700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSub25 - Putative Subtilisin homologue, expressed -
2 Sobic.002G033600 Leucine Rich Repeat family protein, expressed -
3 Sobic.003G319900 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.1 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
4 Sobic.009G024900 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
5 Sobic.002G139000 OsFBX237 - F-box domain containing protein, expressed -
6 Sobic.009G164900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
7 Sobic.004G233600 expressed protein -
8 Sobic.002G007200 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
10 Sobic.009G011500 expressed protein -
11 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
12 Sobic.008G165200 OsFBX358 - F-box domain containing protein, expressed -
13 Sobic.008G034200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
14 Sobic.004G326800 expressed protein -
15 Sobic.009G131200 expressed protein -
16 Sobic.002G230301 - -
17 Sobic.009G158900 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.004G086000 zinc finger family protein, putative, expressed -
19 Sobic.007G132900 linker histone H1 and H5 family protein, expressed -
20 Sobic.001G079900 expressed protein -


Gene co-expression network
sample Sobic001G400200 Sobic001G400200 Sobic001G529700 Sobic001G529700 Sobic001G400200--Sobic001G529700 Sobic002G033600 Sobic002G033600 Sobic001G400200--Sobic002G033600 Sobic003G319900 Sobic003G319900 Sobic001G400200--Sobic003G319900 Sobic009G024900 Sobic009G024900 Sobic001G400200--Sobic009G024900 Sobic002G139000 Sobic002G139000 Sobic001G400200--Sobic002G139000 Sobic009G164900 Sobic009G164900 Sobic001G400200--Sobic009G164900 Sobic004G233600 Sobic004G233600 Sobic001G400200--Sobic004G233600 Sobic002G007200 Sobic002G007200 Sobic001G400200--Sobic002G007200 Sobic002G367300 Sobic002G367300 Sobic001G400200--Sobic002G367300 Sobic001G529700--Sobic001G400200 Sobic003G044700 Sobic003G044700 Sobic001G529700--Sobic003G044700 Sobic010G048900 Sobic010G048900 Sobic001G529700--Sobic010G048900 Sobic009G232500 Sobic009G232500 Sobic001G529700--Sobic009G232500 Sobic006G153200 Sobic006G153200 Sobic001G529700--Sobic006G153200 Sobic007G010200 Sobic007G010200 Sobic001G529700--Sobic007G010200 Sobic007G164300 Sobic007G164300 Sobic001G529700--Sobic007G164300 Sobic003G074900 Sobic003G074900 Sobic001G529700--Sobic003G074900 Sobic002G322700 Sobic002G322700 Sobic001G529700--Sobic002G322700 Sobic010G237650 Sobic010G237650 Sobic002G033600--Sobic010G237650 Sobic007G139400 Sobic007G139400 Sobic002G033600--Sobic007G139400 Sobic002G268900 Sobic002G268900 Sobic002G033600--Sobic002G268900 Sobic001G049600 Sobic001G049600 Sobic002G033600--Sobic001G049600 Sobic002G061400 Sobic002G061400 Sobic002G033600--Sobic002G061400 Sobic007G188900 Sobic007G188900 Sobic002G033600--Sobic007G188900 Sobic010G199800 Sobic010G199800 Sobic002G033600--Sobic010G199800 Sobic009G102000 Sobic009G102000 Sobic002G033600--Sobic009G102000 Sobic002G334600 Sobic002G334600 Sobic002G033600--Sobic002G334600 Sobic005G168400 Sobic005G168400 Sobic003G319900--Sobic005G168400 Sobic010G220800 Sobic010G220800 Sobic003G319900--Sobic010G220800 Sobic002G205000 Sobic002G205000 Sobic003G319900--Sobic002G205000 Sobic010G169200 Sobic010G169200 Sobic003G319900--Sobic010G169200 Sobic004G237000 Sobic004G237000 Sobic003G319900--Sobic004G237000 Sobic002G268300 Sobic002G268300 Sobic003G319900--Sobic002G268300 Sobic003G091700 Sobic003G091700 Sobic003G319900--Sobic003G091700 Sobic001G160100 Sobic001G160100 Sobic003G319900--Sobic001G160100 Sobic002G426000 Sobic002G426000 Sobic003G319900--Sobic002G426000 Sobic009G158900 Sobic009G158900 Sobic009G024900--Sobic009G158900 Sobic003G336900 Sobic003G336900 Sobic009G024900--Sobic003G336900 Sobic002G390800 Sobic002G390800 Sobic009G024900--Sobic002G390800 Sobic002G173400 Sobic002G173400 Sobic009G024900--Sobic002G173400 Sobic008G131900 Sobic008G131900 Sobic009G024900--Sobic008G131900 Sobic009G131200 Sobic009G131200 Sobic009G024900--Sobic009G131200 Sobic003G285700 Sobic003G285700 Sobic009G024900--Sobic003G285700 Sobic001G327100 Sobic001G327100 Sobic009G024900--Sobic001G327100 Sobic003G045000 Sobic003G045000 Sobic009G024900--Sobic003G045000 Sobic004G027000 Sobic004G027000 Sobic002G139000--Sobic004G027000 Sobic001G422700 Sobic001G422700 Sobic002G139000--Sobic001G422700 Sobic001G217100 Sobic001G217100 Sobic002G139000--Sobic001G217100 Sobic006G167300 Sobic006G167300 Sobic002G139000--Sobic006G167300 Sobic006G067700 Sobic006G067700 Sobic002G139000--Sobic006G067700 Sobic009G056300 Sobic009G056300 Sobic002G139000--Sobic009G056300 Sobic001G296800 Sobic001G296800 Sobic002G139000--Sobic001G296800 Sobic010G217100 Sobic010G217100 Sobic002G139000--Sobic010G217100 Sobic004G225300 Sobic004G225300 Sobic002G139000--Sobic004G225300 Sobic009G164900--Sobic002G007200 Sobic003G380500 Sobic003G380500 Sobic009G164900--Sobic003G380500 Sobic001G216600 Sobic001G216600 Sobic009G164900--Sobic001G216600 Sobic003G356200 Sobic003G356200 Sobic009G164900--Sobic003G356200 Sobic009G164900--Sobic001G217100 Sobic004G229100 Sobic004G229100 Sobic009G164900--Sobic004G229100 Sobic009G011500 Sobic009G011500 Sobic009G164900--Sobic009G011500 Sobic007G195400 Sobic007G195400 Sobic009G164900--Sobic007G195400 Sobic002G157200 Sobic002G157200 Sobic009G164900--Sobic002G157200 Sobic004G233600--Sobic002G033600 Sobic004G233600--Sobic010G237650 Sobic004G233600--Sobic002G268900 Sobic007G031300 Sobic007G031300 Sobic004G233600--Sobic007G031300 Sobic004G233600--Sobic007G139400 Sobic006G091000 Sobic006G091000 Sobic004G233600--Sobic006G091000 Sobic009G108400 Sobic009G108400 Sobic004G233600--Sobic009G108400 Sobic004G347100 Sobic004G347100 Sobic004G233600--Sobic004G347100 Sobic001G448100 Sobic001G448100 Sobic004G233600--Sobic001G448100 Sobic006G262600 Sobic006G262600 Sobic002G007200--Sobic006G262600 Sobic002G007200--Sobic003G380500 Sobic002G007200--Sobic009G164900 Sobic006G133600 Sobic006G133600 Sobic002G007200--Sobic006G133600 Sobic002G007200--Sobic002G334600 Sobic009G064900 Sobic009G064900 Sobic002G007200--Sobic009G064900 Sobic002G007200--Sobic002G367300 Sobic004G287800 Sobic004G287800 Sobic002G007200--Sobic004G287800 Sobic004G205500 Sobic004G205500 Sobic002G007200--Sobic004G205500 Sobic002G367300--Sobic006G262600 Sobic010G091700 Sobic010G091700 Sobic002G367300--Sobic010G091700 Sobic001G184400 Sobic001G184400 Sobic002G367300--Sobic001G184400 Sobic002G367300--Sobic009G011500 Sobic002G367300--Sobic003G380500 Sobic004G154600 Sobic004G154600 Sobic002G367300--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic002G367300--Sobic004G199700 Sobic003G174900 Sobic003G174900 Sobic002G367300--Sobic003G174900 Sobic002G367300--Sobic004G205500
Octagon: transcription factors


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