Gene annotation
Transcriptome id Sobic.001G529700.1
Synonym Sb01g049280, SDD1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
OsSub25 - Putative Subtilisin homologue, expressed
UniProt C5X0Y6
Pfam PF05922 PF02225 PF00082
Panther DB PTHR10795 PTHR10795:SF409
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004252serine-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G04110 : Subtilase family protein
RAP-DB (Rice) LOC_Os03g02750.1 : OsSub25 - Putative Subtilisin homologue, expressed
MaizeGDB (Corn) Zm00025a051594 , Zm00025a000258 , Zm00025a053707 , Zm00025a003096 , Zm00025a053517
Brachypodium KQJ97539 , KQK23956
Barley HORVU4Hr1G085590.3 , HORVU4Hr1G085590.2 , HORVU4Hr1G085590.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G529700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G400200 OsFBX436 - F-box domain containing protein, expressed -
2 Sobic.003G044700 zinc finger family protein, putative, expressed -
3 Sobic.010G048900 - -
4 Sobic.009G232500 expressed protein -
5 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
6 Sobic.007G010200 - -
7 Sobic.007G164300 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@rotamase("PubMedID : 26759170,PubMedID : 24597475")@peptidyl-prolyl cis-trans isomerase, putative, expressed -
8 Sobic.003G074900 expressed protein -
9 Sobic.002G322700 expressed protein -
10 Sobic.008G034200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
11 Sobic.002G241100 glycosyl transferase 8 domain containing protein, putative, expressed -
12 Sobic.009G107200 expressed protein -
13 Sobic.009G131200 expressed protein -
14 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
15 Sobic.004G077900 YIF1B, putative, expressed -
16 Sobic.001G505000 cyclin-dependent kinases regulatory subunit 1, putative, expressed K02219: cyclin-dependent kinase regulatory subunit CKS1
17 Sobic.001G069700 fatty acid hydroxylase, putative, expressed -
18 Sobic.003G410200 ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed K04649: HIP2, ubiquitin-conjugating enzyme (huntingtin interacting protein 2)
19 Sobic.001G120200 OsFBDUF16 - F-box and DUF domain containing protein, expressed -
20 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13


Gene co-expression network
sample Sobic001G529700 Sobic001G529700 Sobic001G400200 Sobic001G400200 Sobic001G529700--Sobic001G400200 Sobic003G044700 Sobic003G044700 Sobic001G529700--Sobic003G044700 Sobic010G048900 Sobic010G048900 Sobic001G529700--Sobic010G048900 Sobic009G232500 Sobic009G232500 Sobic001G529700--Sobic009G232500 Sobic006G153200 Sobic006G153200 Sobic001G529700--Sobic006G153200 Sobic007G010200 Sobic007G010200 Sobic001G529700--Sobic007G010200 Sobic007G164300 Sobic007G164300 Sobic001G529700--Sobic007G164300 Sobic003G074900 Sobic003G074900 Sobic001G529700--Sobic003G074900 Sobic002G322700 Sobic002G322700 Sobic001G529700--Sobic002G322700 Sobic001G400200--Sobic001G529700 Sobic002G033600 Sobic002G033600 Sobic001G400200--Sobic002G033600 Sobic003G319900 Sobic003G319900 Sobic001G400200--Sobic003G319900 Sobic009G024900 Sobic009G024900 Sobic001G400200--Sobic009G024900 Sobic002G139000 Sobic002G139000 Sobic001G400200--Sobic002G139000 Sobic009G164900 Sobic009G164900 Sobic001G400200--Sobic009G164900 Sobic004G233600 Sobic004G233600 Sobic001G400200--Sobic004G233600 Sobic002G007200 Sobic002G007200 Sobic001G400200--Sobic002G007200 Sobic002G367300 Sobic002G367300 Sobic001G400200--Sobic002G367300 Sobic001G135200 Sobic001G135200 Sobic003G044700--Sobic001G135200 Sobic005G185200 Sobic005G185200 Sobic003G044700--Sobic005G185200 Sobic003G044700--Sobic003G074900 Sobic006G118400 Sobic006G118400 Sobic003G044700--Sobic006G118400 Sobic002G246800 Sobic002G246800 Sobic003G044700--Sobic002G246800 Sobic003G335300 Sobic003G335300 Sobic003G044700--Sobic003G335300 Sobic003G016300 Sobic003G016300 Sobic003G044700--Sobic003G016300 Sobic001G192700 Sobic001G192700 Sobic003G044700--Sobic001G192700 Sobic010G216400 Sobic010G216400 Sobic003G044700--Sobic010G216400 Sobic003G211700 Sobic003G211700 Sobic010G048900--Sobic003G211700 Sobic003G445200 Sobic003G445200 Sobic010G048900--Sobic003G445200 Sobic010G048900--Sobic006G153200 Sobic001G013200 Sobic001G013200 Sobic010G048900--Sobic001G013200 Sobic003G330200 Sobic003G330200 Sobic010G048900--Sobic003G330200 Sobic007G070300 Sobic007G070300 Sobic010G048900--Sobic007G070300 Sobic003G167000 Sobic003G167000 Sobic010G048900--Sobic003G167000 Sobic003G113400 Sobic003G113400 Sobic010G048900--Sobic003G113400 Sobic001G335201 Sobic001G335201 Sobic010G048900--Sobic001G335201 Sobic003G410200 Sobic003G410200 Sobic009G232500--Sobic003G410200 Sobic001G107300 Sobic001G107300 Sobic009G232500--Sobic001G107300 Sobic003G109200 Sobic003G109200 Sobic009G232500--Sobic003G109200 Sobic002G374200 Sobic002G374200 Sobic009G232500--Sobic002G374200 Sobic006G181700 Sobic006G181700 Sobic009G232500--Sobic006G181700 Sobic001G478700 Sobic001G478700 Sobic009G232500--Sobic001G478700 Sobic009G232500--Sobic007G010200 Sobic001G239100 Sobic001G239100 Sobic009G232500--Sobic001G239100 Sobic007G031100 Sobic007G031100 Sobic009G232500--Sobic007G031100 Sobic009G218000 Sobic009G218000 Sobic006G153200--Sobic009G218000 Sobic002G217500 Sobic002G217500 Sobic006G153200--Sobic002G217500 Sobic004G100100 Sobic004G100100 Sobic006G153200--Sobic004G100100 Sobic003G075200 Sobic003G075200 Sobic006G153200--Sobic003G075200 Sobic006G153200--Sobic003G167000 Sobic009G107200 Sobic009G107200 Sobic006G153200--Sobic009G107200 Sobic006G153200--Sobic003G113400 Sobic003G260600 Sobic003G260600 Sobic006G153200--Sobic003G260600 Sobic008G011800 Sobic008G011800 Sobic006G153200--Sobic008G011800 Sobic004G229000 Sobic004G229000 Sobic007G010200--Sobic004G229000 Sobic008G112100 Sobic008G112100 Sobic007G010200--Sobic008G112100 Sobic007G010200--Sobic007G031100 Sobic007G036800 Sobic007G036800 Sobic007G010200--Sobic007G036800 Sobic007G140100 Sobic007G140100 Sobic007G010200--Sobic007G140100 Sobic009G054400 Sobic009G054400 Sobic007G010200--Sobic009G054400 Sobic003G304800 Sobic003G304800 Sobic007G010200--Sobic003G304800 Sobic001G309200 Sobic001G309200 Sobic007G010200--Sobic001G309200 Sobic010G018900 Sobic010G018900 Sobic007G010200--Sobic010G018900 Sobic007G164300--Sobic007G140100 Sobic010G080900 Sobic010G080900 Sobic007G164300--Sobic010G080900 Sobic009G256700 Sobic009G256700 Sobic007G164300--Sobic009G256700 Sobic004G064600 Sobic004G064600 Sobic007G164300--Sobic004G064600 Sobic007G048700 Sobic007G048700 Sobic007G164300--Sobic007G048700 Sobic007G164300--Sobic007G010200 Sobic005G034600 Sobic005G034600 Sobic007G164300--Sobic005G034600 Sobic001G211500 Sobic001G211500 Sobic007G164300--Sobic001G211500 Sobic004G007700 Sobic004G007700 Sobic007G164300--Sobic004G007700 Sobic008G136800 Sobic008G136800 Sobic003G074900--Sobic008G136800 Sobic006G124300 Sobic006G124300 Sobic003G074900--Sobic006G124300 Sobic006G203900 Sobic006G203900 Sobic003G074900--Sobic006G203900 Sobic002G387800 Sobic002G387800 Sobic003G074900--Sobic002G387800 Sobic009G211900 Sobic009G211900 Sobic003G074900--Sobic009G211900 Sobic003G074900--Sobic003G016300 Sobic001G219800 Sobic001G219800 Sobic003G074900--Sobic001G219800 Sobic007G141100 Sobic007G141100 Sobic003G074900--Sobic007G141100 Sobic009G001900 Sobic009G001900 Sobic003G074900--Sobic009G001900 Sobic010G009700 Sobic010G009700 Sobic002G322700--Sobic010G009700 Sobic005G045800 Sobic005G045800 Sobic002G322700--Sobic005G045800 Sobic007G146200 Sobic007G146200 Sobic002G322700--Sobic007G146200 Sobic001G131900 Sobic001G131900 Sobic002G322700--Sobic001G131900 Sobic008G140600 Sobic008G140600 Sobic002G322700--Sobic008G140600 Sobic001G385300 Sobic001G385300 Sobic002G322700--Sobic001G385300 Sobic007G105700 Sobic007G105700 Sobic002G322700--Sobic007G105700 Sobic009G066200 Sobic009G066200 Sobic002G322700--Sobic009G066200 Sobic008G188800 Sobic008G188800 Sobic002G322700--Sobic008G188800
Octagon: transcription factors


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