Gene annotation
Transcriptome id Sobic.002G236100.1
Synonym
Functional annotation -
UniProt A0A1B6QD40
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G139600 - -
2 Sobic.001G133532 - -
3 Sobic.009G057000 basic helix-loop-helix, putative, expressed -
4 Sobic.009G196400 expressed protein -
5 Sobic.002G128300 MLA6 protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
6 Sobic.002G200300 no apical meristem protein, putative, expressed -
7 Sobic.001G243400 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
8 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
9 Sobic.007G170000 - -
10 Sobic.001G213000 expressed protein -
11 Sobic.005G177500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
12 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.001G331301 - -
14 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
15 Sobic.006G068300 RCN4 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
16 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.007G058300 AP2 domain containing protein, expressed -
18 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
19 Sobic.005G179200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK112d - OsWAK receptor-like protein kinase, expressed -
20 Sobic.001G335600 RNA-binding protein-like, putative, expressed -


Gene co-expression network
sample Sobic002G236100 Sobic002G236100 Sobic009G139600 Sobic009G139600 Sobic002G236100--Sobic009G139600 Sobic001G133532 Sobic001G133532 Sobic002G236100--Sobic001G133532 Sobic009G057000 Sobic009G057000 Sobic002G236100--Sobic009G057000 Sobic009G196400 Sobic009G196400 Sobic002G236100--Sobic009G196400 Sobic002G128300 Sobic002G128300 Sobic002G236100--Sobic002G128300 Sobic002G200300 Sobic002G200300 Sobic002G236100--Sobic002G200300 Sobic001G243400 Sobic001G243400 Sobic002G236100--Sobic001G243400 Sobic001G243500 Sobic001G243500 Sobic002G236100--Sobic001G243500 Sobic007G170000 Sobic007G170000 Sobic002G236100--Sobic007G170000 Sobic009G139600--Sobic009G196400 Sobic003G088400 Sobic003G088400 Sobic009G139600--Sobic003G088400 Sobic001G331301 Sobic001G331301 Sobic009G139600--Sobic001G331301 Sobic001G444400 Sobic001G444400 Sobic009G139600--Sobic001G444400 Sobic008G181100 Sobic008G181100 Sobic009G139600--Sobic008G181100 Sobic009G106800 Sobic009G106800 Sobic009G139600--Sobic009G106800 Sobic005G101600 Sobic005G101600 Sobic009G139600--Sobic005G101600 Sobic009G139600--Sobic002G236100 Sobic005G101700 Sobic005G101700 Sobic009G139600--Sobic005G101700 Sobic001G133532--Sobic009G057000 Sobic009G158700 Sobic009G158700 Sobic001G133532--Sobic009G158700 Sobic001G133532--Sobic002G128300 Sobic008G044500 Sobic008G044500 Sobic001G133532--Sobic008G044500 Sobic001G243600 Sobic001G243600 Sobic001G133532--Sobic001G243600 Sobic001G133532--Sobic009G106800 Sobic001G133532--Sobic001G444400 Sobic004G189301 Sobic004G189301 Sobic001G133532--Sobic004G189301 Sobic003G364100 Sobic003G364100 Sobic001G133532--Sobic003G364100 Sobic009G057000--Sobic002G200300 Sobic001G341550 Sobic001G341550 Sobic009G057000--Sobic001G341550 Sobic009G057000--Sobic002G128300 Sobic009G057000--Sobic001G133532 Sobic009G057000--Sobic001G243500 Sobic009G057000--Sobic009G158700 Sobic009G057000--Sobic001G243600 Sobic004G273400 Sobic004G273400 Sobic009G057000--Sobic004G273400 Sobic001G100700 Sobic001G100700 Sobic009G057000--Sobic001G100700 Sobic009G196400--Sobic001G444400 Sobic002G139300 Sobic002G139300 Sobic009G196400--Sobic002G139300 Sobic006G153100 Sobic006G153100 Sobic009G196400--Sobic006G153100 Sobic002G421800 Sobic002G421800 Sobic009G196400--Sobic002G421800 Sobic001G333400 Sobic001G333400 Sobic009G196400--Sobic001G333400 Sobic009G196400--Sobic009G106800 Sobic004G240600 Sobic004G240600 Sobic009G196400--Sobic004G240600 Sobic003G087300 Sobic003G087300 Sobic009G196400--Sobic003G087300 Sobic007G141500 Sobic007G141500 Sobic009G196400--Sobic007G141500 Sobic002G128300--Sobic006G153100 Sobic005G179200 Sobic005G179200 Sobic002G128300--Sobic005G179200 Sobic002G128300--Sobic001G444400 Sobic002G128300--Sobic001G243600 Sobic009G120000 Sobic009G120000 Sobic002G128300--Sobic009G120000 Sobic004G111800 Sobic004G111800 Sobic002G128300--Sobic004G111800 Sobic003G236450 Sobic003G236450 Sobic002G128300--Sobic003G236450 Sobic001G063000 Sobic001G063000 Sobic002G128300--Sobic001G063000 Sobic002G128300--Sobic007G141500 Sobic002G200300--Sobic001G341550 Sobic002G200300--Sobic001G243600 Sobic002G200300--Sobic001G243500 Sobic005G213200 Sobic005G213200 Sobic002G200300--Sobic005G213200 Sobic002G200300--Sobic009G057000 Sobic002G200300--Sobic001G100700 Sobic002G200300--Sobic004G273400 Sobic002G200300--Sobic002G128300 Sobic002G200300--Sobic001G444400 Sobic002G346100 Sobic002G346100 Sobic001G243400--Sobic002G346100 Sobic001G243400--Sobic001G243500 Sobic001G335600 Sobic001G335600 Sobic001G243400--Sobic001G335600 Sobic001G243400--Sobic001G331301 Sobic001G243400--Sobic004G273400 Sobic001G243400--Sobic001G100700 Sobic006G068300 Sobic006G068300 Sobic001G243400--Sobic006G068300 Sobic001G243400--Sobic005G213200 Sobic010G176101 Sobic010G176101 Sobic001G243400--Sobic010G176101 Sobic001G243500--Sobic004G273400 Sobic001G243500--Sobic001G243600 Sobic001G243500--Sobic001G100700 Sobic001G243500--Sobic005G213200 Sobic001G243500--Sobic002G346100 Sobic001G243500--Sobic009G106800 Sobic001G243500--Sobic001G243400 Sobic001G243500--Sobic002G200300 Sobic001G243500--Sobic001G331301 Sobic006G113500 Sobic006G113500 Sobic007G170000--Sobic006G113500 Sobic010G079600 Sobic010G079600 Sobic007G170000--Sobic010G079600 Sobic001G256200 Sobic001G256200 Sobic007G170000--Sobic001G256200 Sobic004G148100 Sobic004G148100 Sobic007G170000--Sobic004G148100 Sobic002G040900 Sobic002G040900 Sobic007G170000--Sobic002G040900 Sobic002G044800 Sobic002G044800 Sobic007G170000--Sobic002G044800 Sobic007G170000--Sobic009G196400 Sobic001G462700 Sobic001G462700 Sobic007G170000--Sobic001G462700 Sobic007G204700 Sobic007G204700 Sobic007G170000--Sobic007G204700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.