Gene annotation
Transcriptome id Sobic.002G300600.1
Synonym ATCDSP32, CDSP32, Sb02g033120
Functional annotation thioredoxin, putative, expressed
UniProt C5X8I1
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF247
NCBI CDD KOG0907; Thioredoxin
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT1G76080 : chloroplastic drought-induced stress protein of 32 kD
RAP-DB (Rice) LOC_Os07g29410.1 : thioredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a047830
Brachypodium KQK16295
Barley HORVU6Hr1G087720.1 , HORVU6Hr1G087720.2 , HORVU6Hr1G087720.3
Wheat TraesCS6A02G372100 , TraesCS6D02G356100
Populus -


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cDNA sequences
Sobic.002G300600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G222900 OsFtsH9 FtsH protease, homologue of AtFtsH11, expressed K08955: ATP-dependent metalloprotease
2 Sobic.004G244400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
3 Sobic.001G032700 heat shock protein DnaJ, putative, expressed -
4 Sobic.006G204600 pentatricopeptide, putative, expressed -
5 Sobic.001G132300 NB-ARC domain containing protein, expressed -
6 Sobic.009G184900 OsDegp8 - Putative Deg protease homologue, expressed -
7 Sobic.003G115000 - -
8 Sobic.003G343400 sufB/sufD domain containing protein, putative, expressed -
9 Sobic.004G341900 lecithine cholesterol acyltransferase, putative, expressed -
10 Sobic.009G209300 starch synthase, putative, expressed -
11 Sobic.003G088700 - -
12 Sobic.001G058600 BT1 family protein, putative, expressed -
13 Sobic.003G361700 Carbohydrate-binding-like fold(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@starch binding domain containing protein, putative, expressed -
14 Sobic.006G195750 - -
15 Sobic.002G304100 tRNA synthetases class II domain containing protein, expressed K01893: NARS, asparaginyl-tRNA synthetase
16 Sobic.003G301400 DNA-directed polymerase, putative, expressed K03509: DNA polymerase eta
17 Sobic.010G248700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
18 Sobic.001G261200 copper/zinc superoxide dismutase(PubMedID : 23915383)@transporter family protein, putative, expressed -
19 Sobic.001G445100 expressed protein -
20 Sobic.002G231200 Rf1, mitochondrial precursor, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1


Gene co-expression network
sample Sobic002G300600 Sobic002G300600 Sobic003G222900 Sobic003G222900 Sobic002G300600--Sobic003G222900 Sobic004G244400 Sobic004G244400 Sobic002G300600--Sobic004G244400 Sobic001G032700 Sobic001G032700 Sobic002G300600--Sobic001G032700 Sobic006G204600 Sobic006G204600 Sobic002G300600--Sobic006G204600 Sobic001G132300 Sobic001G132300 Sobic002G300600--Sobic001G132300 Sobic009G184900 Sobic009G184900 Sobic002G300600--Sobic009G184900 Sobic003G115000 Sobic003G115000 Sobic002G300600--Sobic003G115000 Sobic003G343400 Sobic003G343400 Sobic002G300600--Sobic003G343400 Sobic004G341900 Sobic004G341900 Sobic002G300600--Sobic004G341900 Sobic003G229300 Sobic003G229300 Sobic003G222900--Sobic003G229300 Sobic010G176550 Sobic010G176550 Sobic003G222900--Sobic010G176550 Sobic003G217700 Sobic003G217700 Sobic003G222900--Sobic003G217700 Sobic003G017100 Sobic003G017100 Sobic003G222900--Sobic003G017100 Sobic002G252800 Sobic002G252800 Sobic003G222900--Sobic002G252800 Sobic001G198100 Sobic001G198100 Sobic003G222900--Sobic001G198100 Sobic010G032900 Sobic010G032900 Sobic003G222900--Sobic010G032900 Sobic007G023200 Sobic007G023200 Sobic003G222900--Sobic007G023200 Sobic009G209300 Sobic009G209300 Sobic003G222900--Sobic009G209300 Sobic006G058100 Sobic006G058100 Sobic004G244400--Sobic006G058100 Sobic003G040000 Sobic003G040000 Sobic004G244400--Sobic003G040000 Sobic001G261200 Sobic001G261200 Sobic004G244400--Sobic001G261200 Sobic004G018100 Sobic004G018100 Sobic004G244400--Sobic004G018100 Sobic004G142700 Sobic004G142700 Sobic004G244400--Sobic004G142700 Sobic004G236400 Sobic004G236400 Sobic004G244400--Sobic004G236400 Sobic001G261573 Sobic001G261573 Sobic004G244400--Sobic001G261573 Sobic001G354501 Sobic001G354501 Sobic004G244400--Sobic001G354501 Sobic003G254000 Sobic003G254000 Sobic004G244400--Sobic003G254000 Sobic004G054400 Sobic004G054400 Sobic001G032700--Sobic004G054400 Sobic001G512500 Sobic001G512500 Sobic001G032700--Sobic001G512500 Sobic001G327800 Sobic001G327800 Sobic001G032700--Sobic001G327800 Sobic005G014700 Sobic005G014700 Sobic001G032700--Sobic005G014700 Sobic004G163800 Sobic004G163800 Sobic001G032700--Sobic004G163800 Sobic001G032700--Sobic003G343400 Sobic001G309300 Sobic001G309300 Sobic001G032700--Sobic001G309300 Sobic001G308200 Sobic001G308200 Sobic001G032700--Sobic001G308200 Sobic002G231200 Sobic002G231200 Sobic001G032700--Sobic002G231200 Sobic002G199000 Sobic002G199000 Sobic006G204600--Sobic002G199000 Sobic002G331100 Sobic002G331100 Sobic006G204600--Sobic002G331100 Sobic010G279100 Sobic010G279100 Sobic006G204600--Sobic010G279100 Sobic004G357300 Sobic004G357300 Sobic006G204600--Sobic004G357300 Sobic010G002000 Sobic010G002000 Sobic006G204600--Sobic010G002000 Sobic004G342500 Sobic004G342500 Sobic006G204600--Sobic004G342500 Sobic001G455500 Sobic001G455500 Sobic006G204600--Sobic001G455500 Sobic001G001300 Sobic001G001300 Sobic006G204600--Sobic001G001300 Sobic001G054100 Sobic001G054100 Sobic006G204600--Sobic001G054100 Sobic002G173000 Sobic002G173000 Sobic001G132300--Sobic002G173000 Sobic005G039500 Sobic005G039500 Sobic001G132300--Sobic005G039500 Sobic003G325200 Sobic003G325200 Sobic001G132300--Sobic003G325200 Sobic001G132300--Sobic003G254000 Sobic009G127900 Sobic009G127900 Sobic001G132300--Sobic009G127900 Sobic008G026900 Sobic008G026900 Sobic001G132300--Sobic008G026900 Sobic001G035900 Sobic001G035900 Sobic001G132300--Sobic001G035900 Sobic009G140500 Sobic009G140500 Sobic001G132300--Sobic009G140500 Sobic001G318432 Sobic001G318432 Sobic001G132300--Sobic001G318432 Sobic009G210000 Sobic009G210000 Sobic009G184900--Sobic009G210000 Sobic007G020500 Sobic007G020500 Sobic009G184900--Sobic007G020500 Sobic005G086250 Sobic005G086250 Sobic009G184900--Sobic005G086250 Sobic001G359900 Sobic001G359900 Sobic009G184900--Sobic001G359900 Sobic003G334200 Sobic003G334200 Sobic009G184900--Sobic003G334200 Sobic003G290800 Sobic003G290800 Sobic009G184900--Sobic003G290800 Sobic007G202900 Sobic007G202900 Sobic009G184900--Sobic007G202900 Sobic009G008400 Sobic009G008400 Sobic009G184900--Sobic009G008400 Sobic007G116200 Sobic007G116200 Sobic009G184900--Sobic007G116200 Sobic004G219400 Sobic004G219400 Sobic003G115000--Sobic004G219400 Sobic002G006600 Sobic002G006600 Sobic003G115000--Sobic002G006600 Sobic007G226600 Sobic007G226600 Sobic003G115000--Sobic007G226600 Sobic003G136900 Sobic003G136900 Sobic003G115000--Sobic003G136900 Sobic003G115000--Sobic003G017100 Sobic005G045000 Sobic005G045000 Sobic003G115000--Sobic005G045000 Sobic003G115000--Sobic008G026900 Sobic001G016201 Sobic001G016201 Sobic003G115000--Sobic001G016201 Sobic003G115000--Sobic009G184900 Sobic003G343400--Sobic001G327800 Sobic002G246500 Sobic002G246500 Sobic003G343400--Sobic002G246500 Sobic003G343400--Sobic002G231200 Sobic006G210400 Sobic006G210400 Sobic003G343400--Sobic006G210400 Sobic003G343400--Sobic004G054400 Sobic003G343400--Sobic001G512500 Sobic003G343400--Sobic001G032700 Sobic010G140600 Sobic010G140600 Sobic003G343400--Sobic010G140600 Sobic001G065600 Sobic001G065600 Sobic003G343400--Sobic001G065600 Sobic001G214300 Sobic001G214300 Sobic004G341900--Sobic001G214300 Sobic003G029700 Sobic003G029700 Sobic004G341900--Sobic003G029700 Sobic002G006900 Sobic002G006900 Sobic004G341900--Sobic002G006900 Sobic010G013800 Sobic010G013800 Sobic004G341900--Sobic010G013800 Sobic003G176500 Sobic003G176500 Sobic004G341900--Sobic003G176500 Sobic009G191000 Sobic009G191000 Sobic004G341900--Sobic009G191000 Sobic009G026500 Sobic009G026500 Sobic004G341900--Sobic009G026500 Sobic008G188900 Sobic008G188900 Sobic004G341900--Sobic008G188900 Sobic006G048600 Sobic006G048600 Sobic004G341900--Sobic006G048600
Octagon: transcription factors


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