Gene annotation
Transcriptome id Sobic.002G400151.3,Sobic.002G400151.4,Sobic.002G400151.2,Sobic.002G400151.1,Sobic.002G400151.5,Sobic.002G400151.6
Synonym -
Functional annotation -
UniProt A0A1W0W7T5 , A0A1W0W7L1 , A0A1W0W7P7 , A0A1W0W7R1
Pfam -
Panther DB PTHR35545 PTHR35545:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22730 : F-box/RNI-like/FBD-like domains-containing protein
RAP-DB (Rice) LOC_Os07g45010.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G119510.8 , HORVU5Hr1G119510.9 , HORVU5Hr1G119510.4 , HORVU5Hr1G119510.5 , HORVU5Hr1G119510.6 , HORVU5Hr1G119510.7 , HORVU5Hr1G119510.1 , HORVU5Hr1G119510.2 , HORVU5Hr1G119510.10 , HORVU5Hr1G119510.11
Wheat TraesCS5D02G525800 , TraesCS4A02G346700 , TraesCS4A02G346700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G106300 - K17675: SUPV3L1, ATP-dependent RNA helicase SUPV3L1/SUV3
2 Sobic.001G043200 expressed protein -
3 Sobic.003G143800 nodal modulator 1 precursor, putative, expressed -
4 Sobic.003G409900 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
5 Sobic.001G205100 expressed protein -
6 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
7 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
8 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
9 Sobic.004G025700 PPR repeat domain containing protein, putative, expressed -
10 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
11 Sobic.002G364900 PPR repeat domain containing protein, putative, expressed -
12 Sobic.001G498800 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
13 Sobic.003G397900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed K12667: SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)
14 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
15 Sobic.010G223400 expressed protein -
16 Sobic.002G340000 FAR1 family protein, expressed -
17 Sobic.005G114500 growth regulator related protein, putative, expressed -
18 Sobic.003G130900 glucosidase II beta subunit-like domain containing protein, expressed K08288: protein kinase C substrate 80K-H
19 Sobic.001G015400 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
20 Sobic.009G254100 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22


Gene co-expression network
sample Sobic002G400151 Sobic002G400151 Sobic006G106300 Sobic006G106300 Sobic002G400151--Sobic006G106300 Sobic001G043200 Sobic001G043200 Sobic002G400151--Sobic001G043200 Sobic003G143800 Sobic003G143800 Sobic002G400151--Sobic003G143800 Sobic003G409900 Sobic003G409900 Sobic002G400151--Sobic003G409900 Sobic001G205100 Sobic001G205100 Sobic002G400151--Sobic001G205100 Sobic003G021600 Sobic003G021600 Sobic002G400151--Sobic003G021600 Sobic003G394500 Sobic003G394500 Sobic002G400151--Sobic003G394500 Sobic001G474400 Sobic001G474400 Sobic002G400151--Sobic001G474400 Sobic004G025700 Sobic004G025700 Sobic002G400151--Sobic004G025700 Sobic006G106300--Sobic003G409900 Sobic006G106300--Sobic003G021600 Sobic002G398700 Sobic002G398700 Sobic006G106300--Sobic002G398700 Sobic001G097900 Sobic001G097900 Sobic006G106300--Sobic001G097900 Sobic001G015400 Sobic001G015400 Sobic006G106300--Sobic001G015400 Sobic009G254100 Sobic009G254100 Sobic006G106300--Sobic009G254100 Sobic002G301100 Sobic002G301100 Sobic006G106300--Sobic002G301100 Sobic006G106300--Sobic001G474400 Sobic002G364900 Sobic002G364900 Sobic006G106300--Sobic002G364900 Sobic005G123400 Sobic005G123400 Sobic001G043200--Sobic005G123400 Sobic003G190200 Sobic003G190200 Sobic001G043200--Sobic003G190200 Sobic001G043200--Sobic003G021600 Sobic001G043200--Sobic003G394500 Sobic009G122500 Sobic009G122500 Sobic001G043200--Sobic009G122500 Sobic007G030100 Sobic007G030100 Sobic001G043200--Sobic007G030100 Sobic004G122900 Sobic004G122900 Sobic001G043200--Sobic004G122900 Sobic009G154900 Sobic009G154900 Sobic001G043200--Sobic009G154900 Sobic003G194800 Sobic003G194800 Sobic001G043200--Sobic003G194800 Sobic008G124800 Sobic008G124800 Sobic003G143800--Sobic008G124800 Sobic006G021700 Sobic006G021700 Sobic003G143800--Sobic006G021700 Sobic003G143800--Sobic001G015400 Sobic007G155500 Sobic007G155500 Sobic003G143800--Sobic007G155500 Sobic008G092800 Sobic008G092800 Sobic003G143800--Sobic008G092800 Sobic002G340900 Sobic002G340900 Sobic003G143800--Sobic002G340900 Sobic004G141800 Sobic004G141800 Sobic003G143800--Sobic004G141800 Sobic005G114500 Sobic005G114500 Sobic003G143800--Sobic005G114500 Sobic003G405500 Sobic003G405500 Sobic003G143800--Sobic003G405500 Sobic003G409900--Sobic006G106300 Sobic001G389200 Sobic001G389200 Sobic003G409900--Sobic001G389200 Sobic006G060000 Sobic006G060000 Sobic003G409900--Sobic006G060000 Sobic003G409900--Sobic009G122500 Sobic003G409900--Sobic003G021600 Sobic010G223400 Sobic010G223400 Sobic003G409900--Sobic010G223400 Sobic004G254800 Sobic004G254800 Sobic003G409900--Sobic004G254800 Sobic003G409900--Sobic001G015400 Sobic009G128500 Sobic009G128500 Sobic003G409900--Sobic009G128500 Sobic008G168200 Sobic008G168200 Sobic001G205100--Sobic008G168200 Sobic008G097900 Sobic008G097900 Sobic001G205100--Sobic008G097900 Sobic001G205100--Sobic001G389200 Sobic003G156400 Sobic003G156400 Sobic001G205100--Sobic003G156400 Sobic001G205100--Sobic003G021600 Sobic008G171400 Sobic008G171400 Sobic001G205100--Sobic008G171400 Sobic001G205100--Sobic006G060000 Sobic004G130400 Sobic004G130400 Sobic001G205100--Sobic004G130400 Sobic003G397900 Sobic003G397900 Sobic001G205100--Sobic003G397900 Sobic009G194000 Sobic009G194000 Sobic003G021600--Sobic009G194000 Sobic003G181700 Sobic003G181700 Sobic003G021600--Sobic003G181700 Sobic003G021600--Sobic003G190200 Sobic002G227500 Sobic002G227500 Sobic003G021600--Sobic002G227500 Sobic009G040325 Sobic009G040325 Sobic003G021600--Sobic009G040325 Sobic009G040250 Sobic009G040250 Sobic003G021600--Sobic009G040250 Sobic003G021600--Sobic003G394500 Sobic001G308400 Sobic001G308400 Sobic003G021600--Sobic001G308400 Sobic003G021600--Sobic001G043200 Sobic003G117800 Sobic003G117800 Sobic003G394500--Sobic003G117800 Sobic001G385000 Sobic001G385000 Sobic003G394500--Sobic001G385000 Sobic004G350700 Sobic004G350700 Sobic003G394500--Sobic004G350700 Sobic001G378800 Sobic001G378800 Sobic003G394500--Sobic001G378800 Sobic007G118500 Sobic007G118500 Sobic003G394500--Sobic007G118500 Sobic003G394500--Sobic003G190200 Sobic006G232800 Sobic006G232800 Sobic003G394500--Sobic006G232800 Sobic003G394500--Sobic007G030100 Sobic001G424800 Sobic001G424800 Sobic003G394500--Sobic001G424800 Sobic005G110499 Sobic005G110499 Sobic001G474400--Sobic005G110499 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G474400--Sobic001G097900 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic006G265600 Sobic006G265600 Sobic001G474400--Sobic006G265600 Sobic004G025700--Sobic003G394500 Sobic008G095900 Sobic008G095900 Sobic004G025700--Sobic008G095900 Sobic006G191000 Sobic006G191000 Sobic004G025700--Sobic006G191000 Sobic010G086300 Sobic010G086300 Sobic004G025700--Sobic010G086300 Sobic007G226800 Sobic007G226800 Sobic004G025700--Sobic007G226800 Sobic001G486900 Sobic001G486900 Sobic004G025700--Sobic001G486900 Sobic010G112600 Sobic010G112600 Sobic004G025700--Sobic010G112600 Sobic004G025700--Sobic002G400151 Sobic004G194400 Sobic004G194400 Sobic004G025700--Sobic004G194400
Octagon: transcription factors


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