Gene annotation
Transcriptome id Sobic.003G024200.1
Synonym CAD1, Sb03g002320, ARA8, ATPCS1, PCS1
Functional annotation glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed
UniProt C5XL61
Pfam PF05023 PF09328
Panther DB PTHR33447 PTHR33447:SF2
NCBI CDD KOG0632; Phytochelatin synthase
KEGG Orthology K05941; glutathione gamma-glutamylcysteinyltransferase
Gene Ontology GO:0016756; glutathione gamma-glutamylcysteinyltransferase activity GO:0010038response to metal ion


Orthologs (automatic annotation)
TAIR AT5G44070 : phytochelatin synthase 1 (PCS1)
RAP-DB (Rice) LOC_Os06g01260.1 : glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed
MaizeGDB (Corn) Zm00025a035879
Brachypodium KQK18782
Barley HORVU5Hr1G059310.11 , HORVU5Hr1G059310.2 , HORVU5Hr1G059310.12 , HORVU5Hr1G059310.6 , HORVU5Hr1G059310.8 , HORVU5Hr1G059310.1 , HORVU1Hr1G078690.12 , HORVU1Hr1G081110.2 , HORVU1Hr1G081110.3 , HORVU1Hr1G078690.11 , HORVU1Hr1G081110.1 , HORVU1Hr1G078690.21 , HORVU1Hr1G078690.23 , HORVU1Hr1G078690.24 , HORVU7Hr1G040110.3 , HORVU7Hr1G040110.2 , HORVU7Hr1G040110.1 , HORVU7Hr1G040110.7 , HORVU7Hr1G040110.6 , HORVU7Hr1G040110.5 , HORVU7Hr1G040110.4
Wheat TraesCS4D02G349600 , TraesCS7D02G197800 , TraesCS7D02G197800 , TraesCS7B02G102000 , TraesCS7B02G102000 , TraesCS7A02G196300 , TraesCS7A02G196300 , TraesCS5A02G525400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G205100 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.002G130800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
3 Sobic.010G251000 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M
4 Sobic.001G382000 AGC_AGC_other_RS6K_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K04688: ribosomal protein S6 kinase beta
5 Sobic.004G122600 VHS and GAT domain containing protein, expressed -
6 Sobic.010G013800 START domain containing protein, expressed -
7 Sobic.008G124700 splicing factor, arginine/serine-rich 18, putative, expressed -
8 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
9 Sobic.004G118200 reticulon domain containing protein, putative, expressed -
10 Sobic.003G152800 cyclase/dehydrase family protein, expressed -
11 Sobic.001G421300 protein kinase APK1A, chloroplast precursor, putative, expressed -
12 Sobic.003G345400 NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
13 Sobic.007G171400 low molecular weight protein-tyrosine-phosphatase slr0328, putative, expressed K01104: protein-tyrosine phosphatase
14 Sobic.009G217100 phosphatidylinositol transfer, putative, expressed -
15 Sobic.001G007000 -(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
16 Sobic.003G262200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
17 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -
18 Sobic.004G343500 OsCttP2 - Putative C-terminal processing peptidase homologue, expressed -
19 Sobic.002G249500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
20 Sobic.004G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -


Gene co-expression network
sample Sobic003G024200 Sobic003G024200 Sobic006G205100 Sobic006G205100 Sobic003G024200--Sobic006G205100 Sobic002G130800 Sobic002G130800 Sobic003G024200--Sobic002G130800 Sobic010G251000 Sobic010G251000 Sobic003G024200--Sobic010G251000 Sobic001G382000 Sobic001G382000 Sobic003G024200--Sobic001G382000 Sobic004G122600 Sobic004G122600 Sobic003G024200--Sobic004G122600 Sobic010G013800 Sobic010G013800 Sobic003G024200--Sobic010G013800 Sobic008G124700 Sobic008G124700 Sobic003G024200--Sobic008G124700 Sobic003G229300 Sobic003G229300 Sobic003G024200--Sobic003G229300 Sobic004G118200 Sobic004G118200 Sobic003G024200--Sobic004G118200 Sobic001G073500 Sobic001G073500 Sobic006G205100--Sobic001G073500 Sobic002G273300 Sobic002G273300 Sobic006G205100--Sobic002G273300 Sobic001G207700 Sobic001G207700 Sobic006G205100--Sobic001G207700 Sobic001G484800 Sobic001G484800 Sobic006G205100--Sobic001G484800 Sobic010G176200 Sobic010G176200 Sobic006G205100--Sobic010G176200 Sobic004G343500 Sobic004G343500 Sobic006G205100--Sobic004G343500 Sobic007G201500 Sobic007G201500 Sobic006G205100--Sobic007G201500 Sobic003G004200 Sobic003G004200 Sobic006G205100--Sobic003G004200 Sobic001G065600 Sobic001G065600 Sobic006G205100--Sobic001G065600 Sobic006G092400 Sobic006G092400 Sobic002G130800--Sobic006G092400 Sobic001G137100 Sobic001G137100 Sobic002G130800--Sobic001G137100 Sobic002G130800--Sobic004G118200 Sobic010G147100 Sobic010G147100 Sobic002G130800--Sobic010G147100 Sobic006G090500 Sobic006G090500 Sobic002G130800--Sobic006G090500 Sobic010G228400 Sobic010G228400 Sobic002G130800--Sobic010G228400 Sobic004G233200 Sobic004G233200 Sobic002G130800--Sobic004G233200 Sobic009G217100 Sobic009G217100 Sobic002G130800--Sobic009G217100 Sobic001G481900 Sobic001G481900 Sobic002G130800--Sobic001G481900 Sobic001G007000 Sobic001G007000 Sobic010G251000--Sobic001G007000 Sobic001G080700 Sobic001G080700 Sobic010G251000--Sobic001G080700 Sobic006G200600 Sobic006G200600 Sobic010G251000--Sobic006G200600 Sobic004G066200 Sobic004G066200 Sobic010G251000--Sobic004G066200 Sobic004G121100 Sobic004G121100 Sobic010G251000--Sobic004G121100 Sobic001G392300 Sobic001G392300 Sobic010G251000--Sobic001G392300 Sobic001G047400 Sobic001G047400 Sobic010G251000--Sobic001G047400 Sobic004G353200 Sobic004G353200 Sobic010G251000--Sobic004G353200 Sobic008G046500 Sobic008G046500 Sobic010G251000--Sobic008G046500 Sobic001G382000--Sobic001G137100 Sobic006G087700 Sobic006G087700 Sobic001G382000--Sobic006G087700 Sobic009G249200 Sobic009G249200 Sobic001G382000--Sobic009G249200 Sobic007G024700 Sobic007G024700 Sobic001G382000--Sobic007G024700 Sobic009G094300 Sobic009G094300 Sobic001G382000--Sobic009G094300 Sobic003G109100 Sobic003G109100 Sobic001G382000--Sobic003G109100 Sobic004G052900 Sobic004G052900 Sobic001G382000--Sobic004G052900 Sobic001G373200 Sobic001G373200 Sobic001G382000--Sobic001G373200 Sobic008G070500 Sobic008G070500 Sobic001G382000--Sobic008G070500 Sobic004G122600--Sobic001G382000 Sobic003G365300 Sobic003G365300 Sobic004G122600--Sobic003G365300 Sobic010G205800 Sobic010G205800 Sobic004G122600--Sobic010G205800 Sobic001G481800 Sobic001G481800 Sobic004G122600--Sobic001G481800 Sobic003G173600 Sobic003G173600 Sobic004G122600--Sobic003G173600 Sobic004G122600--Sobic007G201500 Sobic004G122600--Sobic008G070500 Sobic001G355800 Sobic001G355800 Sobic004G122600--Sobic001G355800 Sobic006G002000 Sobic006G002000 Sobic004G122600--Sobic006G002000 Sobic004G341900 Sobic004G341900 Sobic010G013800--Sobic004G341900 Sobic003G029700 Sobic003G029700 Sobic010G013800--Sobic003G029700 Sobic008G188900 Sobic008G188900 Sobic010G013800--Sobic008G188900 Sobic001G318432 Sobic001G318432 Sobic010G013800--Sobic001G318432 Sobic001G214300 Sobic001G214300 Sobic010G013800--Sobic001G214300 Sobic009G191000 Sobic009G191000 Sobic010G013800--Sobic009G191000 Sobic010G013800--Sobic003G229300 Sobic006G048600 Sobic006G048600 Sobic010G013800--Sobic006G048600 Sobic002G411600 Sobic002G411600 Sobic010G013800--Sobic002G411600 Sobic010G101800 Sobic010G101800 Sobic008G124700--Sobic010G101800 Sobic001G124000 Sobic001G124000 Sobic008G124700--Sobic001G124000 Sobic007G167500 Sobic007G167500 Sobic008G124700--Sobic007G167500 Sobic001G107500 Sobic001G107500 Sobic008G124700--Sobic001G107500 Sobic008G124700--Sobic006G200600 Sobic003G184699 Sobic003G184699 Sobic008G124700--Sobic003G184699 Sobic001G016000 Sobic001G016000 Sobic008G124700--Sobic001G016000 Sobic006G133800 Sobic006G133800 Sobic008G124700--Sobic006G133800 Sobic009G210500 Sobic009G210500 Sobic008G124700--Sobic009G210500 Sobic003G191700 Sobic003G191700 Sobic003G229300--Sobic003G191700 Sobic003G229300--Sobic010G176200 Sobic006G133900 Sobic006G133900 Sobic003G229300--Sobic006G133900 Sobic004G042200 Sobic004G042200 Sobic003G229300--Sobic004G042200 Sobic001G169900 Sobic001G169900 Sobic003G229300--Sobic001G169900 Sobic008G115900 Sobic008G115900 Sobic003G229300--Sobic008G115900 Sobic007G198300 Sobic007G198300 Sobic003G229300--Sobic007G198300 Sobic003G262200 Sobic003G262200 Sobic003G229300--Sobic003G262200 Sobic003G222900 Sobic003G222900 Sobic003G229300--Sobic003G222900 Sobic010G074300 Sobic010G074300 Sobic004G118200--Sobic010G074300 Sobic004G118200--Sobic003G229300 Sobic002G386100 Sobic002G386100 Sobic004G118200--Sobic002G386100 Sobic001G268200 Sobic001G268200 Sobic004G118200--Sobic001G268200 Sobic004G118200--Sobic002G130800 Sobic001G476700 Sobic001G476700 Sobic004G118200--Sobic001G476700 Sobic004G118200--Sobic010G147100 Sobic004G118200--Sobic010G013800 Sobic004G118200--Sobic006G133900
Octagon: transcription factors


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