Gene annotation
Transcriptome id Sobic.001G382000.1,Sobic.001G382000.2
Synonym ATPK2, Sb01g036230, S6K2, ATPK19, ATS6K2
Functional annotation AGC_AGC_other_RS6K_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt A0A1B6QND9
Pfam PF00433 PF14531
Panther DB PTHR24351 PTHR24351:SF80
NCBI CDD KOG0598; Ribosomal protein S6 kinase and related proteins
KEGG Orthology K04688; ribosomal protein S6 kinase beta
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004674protein serine/threonine kinase activity


Orthologs (automatic annotation)
TAIR AT3G08720 : serine/threonine protein kinase 2
RAP-DB (Rice) LOC_Os03g21620.1 : AGC_AGC_other_RS6K_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a052440 , Zm00025a049172 , Zm00025a002339
Brachypodium KQK14617 , KQK14619 , KQK14618 , KQK14620 , KQK21815
Barley HORVU2Hr1G017630.3 , HORVU2Hr1G017630.2 , HORVU2Hr1G017630.1 , HORVU2Hr1G017630.7 , HORVU2Hr1G017630.6 , HORVU2Hr1G017630.5 , HORVU2Hr1G017630.4 , HORVU4Hr1G050660.8 , HORVU4Hr1G050660.3 , HORVU4Hr1G050660.2 , HORVU4Hr1G050660.1 , HORVU4Hr1G050660.5 , HORVU4Hr1G050660.4
Wheat TraesCS4A02G134300 , TraesCS4A02G134300 , TraesCS2D02G104200 , TraesCS2D02G104200 , TraesCS2B02G121500 , TraesCS4D02G172700 , TraesCS4B02G170700
Populus PNT09926 , PNT09927


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cDNA sequences
Sobic.001G382000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G137100 homeodomain protein, putative, expressed -
2 Sobic.006G087700 T-complex protein 11, putative, expressed -
3 Sobic.009G249200 transmembrane protein, putative, expressed -
4 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
5 Sobic.009G094300 emp24/gp25L/p24 family protein, putative, expressed -
6 Sobic.003G109100 decarboxylase, putative, expressed K01634: SGPL1, sphinganine-1-phosphate aldolase
7 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
8 Sobic.001G373200 lipase precursor, putative, expressed -
9 Sobic.008G070500 GTP binding protein, putative, expressed -
10 Sobic.001G056601 - K01695: tryptophan synthase alpha chain
11 Sobic.005G157000 expressed protein -
12 Sobic.001G048766 - -
13 Sobic.003G100800 acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
14 Sobic.001G159600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
15 Sobic.009G094900 sugar porter, putative, expressed -
16 Sobic.003G093300 - -
17 Sobic.001G224600 peroxisome assembly protein 12, putative, expressed K13345: PEX12, peroxin-12
18 Sobic.007G194300 sulfite oxidase, putative, expressed K00387: sulfite oxidase
19 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
20 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1


Gene co-expression network
sample Sobic001G382000 Sobic001G382000 Sobic001G137100 Sobic001G137100 Sobic001G382000--Sobic001G137100 Sobic006G087700 Sobic006G087700 Sobic001G382000--Sobic006G087700 Sobic009G249200 Sobic009G249200 Sobic001G382000--Sobic009G249200 Sobic007G024700 Sobic007G024700 Sobic001G382000--Sobic007G024700 Sobic009G094300 Sobic009G094300 Sobic001G382000--Sobic009G094300 Sobic003G109100 Sobic003G109100 Sobic001G382000--Sobic003G109100 Sobic004G052900 Sobic004G052900 Sobic001G382000--Sobic004G052900 Sobic001G373200 Sobic001G373200 Sobic001G382000--Sobic001G373200 Sobic008G070500 Sobic008G070500 Sobic001G382000--Sobic008G070500 Sobic001G390800 Sobic001G390800 Sobic001G137100--Sobic001G390800 Sobic001G137100--Sobic007G024700 Sobic010G228400 Sobic010G228400 Sobic001G137100--Sobic010G228400 Sobic002G132000 Sobic002G132000 Sobic001G137100--Sobic002G132000 Sobic001G270400 Sobic001G270400 Sobic001G137100--Sobic001G270400 Sobic002G130800 Sobic002G130800 Sobic001G137100--Sobic002G130800 Sobic001G137100--Sobic009G094300 Sobic002G111000 Sobic002G111000 Sobic001G137100--Sobic002G111000 Sobic002G427050 Sobic002G427050 Sobic001G137100--Sobic002G427050 Sobic007G075400 Sobic007G075400 Sobic006G087700--Sobic007G075400 Sobic003G322700 Sobic003G322700 Sobic006G087700--Sobic003G322700 Sobic006G233500 Sobic006G233500 Sobic006G087700--Sobic006G233500 Sobic010G139600 Sobic010G139600 Sobic006G087700--Sobic010G139600 Sobic003G301900 Sobic003G301900 Sobic006G087700--Sobic003G301900 Sobic003G320700 Sobic003G320700 Sobic006G087700--Sobic003G320700 Sobic006G204900 Sobic006G204900 Sobic006G087700--Sobic006G204900 Sobic002G128200 Sobic002G128200 Sobic006G087700--Sobic002G128200 Sobic006G043600 Sobic006G043600 Sobic006G087700--Sobic006G043600 Sobic009G249200--Sobic007G024700 Sobic001G409600 Sobic001G409600 Sobic009G249200--Sobic001G409600 Sobic006G237400 Sobic006G237400 Sobic009G249200--Sobic006G237400 Sobic009G166300 Sobic009G166300 Sobic009G249200--Sobic009G166300 Sobic004G021100 Sobic004G021100 Sobic009G249200--Sobic004G021100 Sobic010G205800 Sobic010G205800 Sobic009G249200--Sobic010G205800 Sobic003G408500 Sobic003G408500 Sobic009G249200--Sobic003G408500 Sobic002G315200 Sobic002G315200 Sobic009G249200--Sobic002G315200 Sobic009G027300 Sobic009G027300 Sobic009G249200--Sobic009G027300 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic007G024700--Sobic009G094300 Sobic007G024700--Sobic009G249200 Sobic007G024700--Sobic004G052900 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic003G305200 Sobic003G305200 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic009G094300--Sobic007G024700 Sobic004G113400 Sobic004G113400 Sobic009G094300--Sobic004G113400 Sobic009G094300--Sobic002G270500 Sobic004G329400 Sobic004G329400 Sobic009G094300--Sobic004G329400 Sobic005G157000 Sobic005G157000 Sobic009G094300--Sobic005G157000 Sobic009G094300--Sobic004G052900 Sobic009G094300--Sobic001G270400 Sobic001G248300 Sobic001G248300 Sobic009G094300--Sobic001G248300 Sobic001G207400 Sobic001G207400 Sobic009G094300--Sobic001G207400 Sobic003G109100--Sobic004G052900 Sobic003G109100--Sobic007G024700 Sobic003G109100--Sobic001G270400 Sobic003G100800 Sobic003G100800 Sobic003G109100--Sobic003G100800 Sobic003G109100--Sobic009G094300 Sobic006G245400 Sobic006G245400 Sobic003G109100--Sobic006G245400 Sobic003G109100--Sobic001G137100 Sobic002G340100 Sobic002G340100 Sobic003G109100--Sobic002G340100 Sobic003G109100--Sobic010G205800 Sobic004G052900--Sobic003G109100 Sobic004G052900--Sobic007G024700 Sobic004G052900--Sobic003G100800 Sobic007G172400 Sobic007G172400 Sobic004G052900--Sobic007G172400 Sobic004G052900--Sobic002G340100 Sobic004G052900--Sobic002G419800 Sobic004G052900--Sobic006G245400 Sobic004G052900--Sobic001G248300 Sobic004G052900--Sobic009G094300 Sobic003G407300 Sobic003G407300 Sobic001G373200--Sobic003G407300 Sobic009G121100 Sobic009G121100 Sobic001G373200--Sobic009G121100 Sobic003G019100 Sobic003G019100 Sobic001G373200--Sobic003G019100 Sobic004G295800 Sobic004G295800 Sobic001G373200--Sobic004G295800 Sobic001G373200--Sobic007G024700 Sobic006G214500 Sobic006G214500 Sobic001G373200--Sobic006G214500 Sobic002G179900 Sobic002G179900 Sobic001G373200--Sobic002G179900 Sobic001G156100 Sobic001G156100 Sobic001G373200--Sobic001G156100 Sobic001G373200--Sobic009G249200 Sobic001G309400 Sobic001G309400 Sobic008G070500--Sobic001G309400 Sobic008G070500--Sobic004G052900 Sobic008G070500--Sobic002G340100 Sobic001G114000 Sobic001G114000 Sobic008G070500--Sobic001G114000 Sobic008G070500--Sobic010G205800 Sobic004G274200 Sobic004G274200 Sobic008G070500--Sobic004G274200 Sobic003G443100 Sobic003G443100 Sobic008G070500--Sobic003G443100 Sobic001G166600 Sobic001G166600 Sobic008G070500--Sobic001G166600 Sobic008G070500--Sobic009G094300
Octagon: transcription factors


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