Gene annotation
Transcriptome id Sobic.003G030000.1
Synonym Sb03g002820
Functional annotation expressed protein
UniProt C5XLV0
Pfam -
Panther DB PTHR34368 PTHR34368:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11870 : Alkaline phytoceramidase (aPHC)
RAP-DB (Rice) LOC_Os01g10100.2 : expressed protein
MaizeGDB (Corn) Zm00025a035836
Brachypodium KQK03174 , KQK03175
Barley HORVU3Hr1G027470.6 , HORVU3Hr1G027470.7 , HORVU3Hr1G027470.5 , HORVU3Hr1G027470.4 , HORVU3Hr1G027470.3 , HORVU3Hr1G027470.2 , HORVU3Hr1G027470.1
Wheat TraesCS3D02G143700 , TraesCS3A02G310900 , TraesCS3B02G161200
Populus -


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cDNA sequences
Sobic.003G030000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G162500 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
2 Sobic.006G016600 OsSigP3 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K09648: mitochondrial inner membrane protease subunit 2
3 Sobic.009G171200 PX domain containing protein, expressed -
4 Sobic.010G018800 impaired sucrose induction 1, putative, expressed -
5 Sobic.003G432800 CRS1/YhbY domain containing protein, putative, expressed -
6 Sobic.010G256433 - -
7 Sobic.001G135300 expressed protein -
8 Sobic.006G112500 CAF1 family ribonuclease containing protein, putative, expressed K01148: PARN, poly(A)-specific ribonuclease
9 Sobic.001G003700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
10 Sobic.003G231900 mitotic checkpoint protein, putative, expressed K14298: RAE1, mRNA export factor
11 Sobic.002G342300 exostosin family domain containing protein, expressed -
12 Sobic.006G146900 pentatricopeptide repeat domain containing protein, putative, expressed -
13 Sobic.001G179200 expressed protein -
14 Sobic.004G237500 hydrolase, acting on carbon-nitrogen, putative, expressed -
15 Sobic.002G200500 pentatricopeptide, putative, expressed -
16 Sobic.002G126200 expressed protein -
17 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
18 Sobic.007G153500 metal cation transporter, putative, expressed K14713: SLC39A7, KE4, solute carrier family 39 (zinc transporter), member 7
19 Sobic.009G203000 ATP-dependent protease La, putative, expressed K11793: cereblon
20 Sobic.004G205200 PPR repeat containing protein, expressed -


Gene co-expression network
sample Sobic003G030000 Sobic003G030000 Sobic007G162500 Sobic007G162500 Sobic003G030000--Sobic007G162500 Sobic006G016600 Sobic006G016600 Sobic003G030000--Sobic006G016600 Sobic009G171200 Sobic009G171200 Sobic003G030000--Sobic009G171200 Sobic010G018800 Sobic010G018800 Sobic003G030000--Sobic010G018800 Sobic003G432800 Sobic003G432800 Sobic003G030000--Sobic003G432800 Sobic010G256433 Sobic010G256433 Sobic003G030000--Sobic010G256433 Sobic001G135300 Sobic001G135300 Sobic003G030000--Sobic001G135300 Sobic006G112500 Sobic006G112500 Sobic003G030000--Sobic006G112500 Sobic001G003700 Sobic001G003700 Sobic003G030000--Sobic001G003700 Sobic007G162500--Sobic003G030000 Sobic002G230400 Sobic002G230400 Sobic007G162500--Sobic002G230400 Sobic009G229900 Sobic009G229900 Sobic007G162500--Sobic009G229900 Sobic004G020100 Sobic004G020100 Sobic007G162500--Sobic004G020100 Sobic003G062101 Sobic003G062101 Sobic007G162500--Sobic003G062101 Sobic007G162500--Sobic001G135300 Sobic008G174500 Sobic008G174500 Sobic007G162500--Sobic008G174500 Sobic010G273800 Sobic010G273800 Sobic007G162500--Sobic010G273800 Sobic002G250550 Sobic002G250550 Sobic007G162500--Sobic002G250550 Sobic002G384200 Sobic002G384200 Sobic006G016600--Sobic002G384200 Sobic003G041300 Sobic003G041300 Sobic006G016600--Sobic003G041300 Sobic003G049800 Sobic003G049800 Sobic006G016600--Sobic003G049800 Sobic006G016600--Sobic003G030000 Sobic009G107200 Sobic009G107200 Sobic006G016600--Sobic009G107200 Sobic004G175700 Sobic004G175700 Sobic006G016600--Sobic004G175700 Sobic006G180600 Sobic006G180600 Sobic006G016600--Sobic006G180600 Sobic007G192100 Sobic007G192100 Sobic006G016600--Sobic007G192100 Sobic002G293200 Sobic002G293200 Sobic006G016600--Sobic002G293200 Sobic006G210700 Sobic006G210700 Sobic009G171200--Sobic006G210700 Sobic001G179200 Sobic001G179200 Sobic009G171200--Sobic001G179200 Sobic009G166600 Sobic009G166600 Sobic009G171200--Sobic009G166600 Sobic002G313900 Sobic002G313900 Sobic009G171200--Sobic002G313900 Sobic003G150900 Sobic003G150900 Sobic009G171200--Sobic003G150900 Sobic007G218600 Sobic007G218600 Sobic009G171200--Sobic007G218600 Sobic003G199500 Sobic003G199500 Sobic009G171200--Sobic003G199500 Sobic007G018200 Sobic007G018200 Sobic009G171200--Sobic007G018200 Sobic003G262400 Sobic003G262400 Sobic009G171200--Sobic003G262400 Sobic003G365400 Sobic003G365400 Sobic010G018800--Sobic003G365400 Sobic010G018800--Sobic010G256433 Sobic003G222400 Sobic003G222400 Sobic010G018800--Sobic003G222400 Sobic002G254600 Sobic002G254600 Sobic010G018800--Sobic002G254600 Sobic001G042400 Sobic001G042400 Sobic010G018800--Sobic001G042400 Sobic004G339000 Sobic004G339000 Sobic010G018800--Sobic004G339000 Sobic005G160900 Sobic005G160900 Sobic010G018800--Sobic005G160900 Sobic007G085350 Sobic007G085350 Sobic010G018800--Sobic007G085350 Sobic002G200500 Sobic002G200500 Sobic010G018800--Sobic002G200500 Sobic002G076500 Sobic002G076500 Sobic003G432800--Sobic002G076500 Sobic003G010900 Sobic003G010900 Sobic003G432800--Sobic003G010900 Sobic003G432800--Sobic006G112500 Sobic001G051400 Sobic001G051400 Sobic003G432800--Sobic001G051400 Sobic006G191200 Sobic006G191200 Sobic003G432800--Sobic006G191200 Sobic002G381900 Sobic002G381900 Sobic003G432800--Sobic002G381900 Sobic002G342300 Sobic002G342300 Sobic003G432800--Sobic002G342300 Sobic001G123600 Sobic001G123600 Sobic003G432800--Sobic001G123600 Sobic003G113300 Sobic003G113300 Sobic003G432800--Sobic003G113300 Sobic010G256433--Sobic001G042400 Sobic009G236700 Sobic009G236700 Sobic010G256433--Sobic009G236700 Sobic010G256433--Sobic003G222400 Sobic004G082000 Sobic004G082000 Sobic010G256433--Sobic004G082000 Sobic006G272450 Sobic006G272450 Sobic010G256433--Sobic006G272450 Sobic009G070900 Sobic009G070900 Sobic010G256433--Sobic009G070900 Sobic007G213200 Sobic007G213200 Sobic010G256433--Sobic007G213200 Sobic005G138900 Sobic005G138900 Sobic010G256433--Sobic005G138900 Sobic010G256433--Sobic010G018800 Sobic004G010600 Sobic004G010600 Sobic001G135300--Sobic004G010600 Sobic001G135300--Sobic007G162500 Sobic006G154100 Sobic006G154100 Sobic001G135300--Sobic006G154100 Sobic001G135300--Sobic003G432800 Sobic006G146900 Sobic006G146900 Sobic001G135300--Sobic006G146900 Sobic004G039900 Sobic004G039900 Sobic001G135300--Sobic004G039900 Sobic006G255900 Sobic006G255900 Sobic001G135300--Sobic006G255900 Sobic002G237700 Sobic002G237700 Sobic001G135300--Sobic002G237700 Sobic005G150900 Sobic005G150900 Sobic001G135300--Sobic005G150900 Sobic006G232800 Sobic006G232800 Sobic006G112500--Sobic006G232800 Sobic006G191000 Sobic006G191000 Sobic006G112500--Sobic006G191000 Sobic003G394500 Sobic003G394500 Sobic006G112500--Sobic003G394500 Sobic010G086300 Sobic010G086300 Sobic006G112500--Sobic010G086300 Sobic001G356100 Sobic001G356100 Sobic006G112500--Sobic001G356100 Sobic003G117800 Sobic003G117800 Sobic006G112500--Sobic003G117800 Sobic002G304700 Sobic002G304700 Sobic006G112500--Sobic002G304700 Sobic009G046900 Sobic009G046900 Sobic006G112500--Sobic009G046900 Sobic003G021600 Sobic003G021600 Sobic006G112500--Sobic003G021600 Sobic001G003700--Sobic003G030000 Sobic004G340500 Sobic004G340500 Sobic001G003700--Sobic004G340500 Sobic001G339900 Sobic001G339900 Sobic001G003700--Sobic001G339900 Sobic001G003700--Sobic006G272450 Sobic001G063900 Sobic001G063900 Sobic001G003700--Sobic001G063900 Sobic002G052500 Sobic002G052500 Sobic001G003700--Sobic002G052500 Sobic006G166300 Sobic006G166300 Sobic001G003700--Sobic006G166300 Sobic004G098200 Sobic004G098200 Sobic001G003700--Sobic004G098200 Sobic001G003700--Sobic007G162500
Octagon: transcription factors


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