Gene annotation
Transcriptome id Sobic.009G203000.1
Synonym Sb09g026040
Functional annotation ATP-dependent protease La, putative, expressed
UniProt C5Z1A3
Pfam PF02190
Panther DB PTHR14255 PTHR14255:SF4
NCBI CDD KOG1400; Predicted ATP-dependent protease PIL, contains LON domain
KEGG Orthology K11793; cereblon
Gene Ontology GO:0006508; proteolysis GO:0004176ATP-dependent peptidase activity


Orthologs (automatic annotation)
TAIR AT2G25740 : ATP-dependent protease La (LON) domain protein
RAP-DB (Rice) LOC_Os05g44590.2 : ATP-dependent protease La, putative, expressed
MaizeGDB (Corn) Zm00025a044320
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G413500 F-actin-capping protein subunit alpha, putative, expressed K10364: capping protein (actin filament) muscle Z-line, alpha
2 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
3 Sobic.005G150600 expressed protein -
4 Sobic.003G432800 CRS1/YhbY domain containing protein, putative, expressed -
5 Sobic.009G171200 PX domain containing protein, expressed -
6 Sobic.007G153500 metal cation transporter, putative, expressed K14713: SLC39A7, KE4, solute carrier family 39 (zinc transporter), member 7
7 Sobic.004G320700 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
8 Sobic.010G244900 auxin efflux carrier, putative, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
9 Sobic.006G210700 potassium transporter, putative, expressed -
10 Sobic.003G193500 CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
11 Sobic.004G020100 division protein, putative, expressed -
12 Sobic.001G237600 transcription factor Dp, putative, expressed K04683: transcription factor Dp-1
13 Sobic.002G234600 ZOS9-15 - C2H2 zinc finger protein, expressed -
14 Sobic.002G276800 ER lumen protein retaining receptor, putative, expressed -
15 Sobic.004G172500 expressed protein -
16 Sobic.008G116700 expressed protein -
17 Sobic.004G167200 nucleoside-diphosphate-sugar epimerase, putative, expressed -
18 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -
19 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
20 Sobic.002G292900 protein binding protein, putative, expressed -


Gene co-expression network
sample Sobic009G203000 Sobic009G203000 Sobic002G413500 Sobic002G413500 Sobic009G203000--Sobic002G413500 Sobic002G076500 Sobic002G076500 Sobic009G203000--Sobic002G076500 Sobic005G150600 Sobic005G150600 Sobic009G203000--Sobic005G150600 Sobic003G432800 Sobic003G432800 Sobic009G203000--Sobic003G432800 Sobic009G171200 Sobic009G171200 Sobic009G203000--Sobic009G171200 Sobic007G153500 Sobic007G153500 Sobic009G203000--Sobic007G153500 Sobic004G320700 Sobic004G320700 Sobic009G203000--Sobic004G320700 Sobic010G244900 Sobic010G244900 Sobic009G203000--Sobic010G244900 Sobic006G210700 Sobic006G210700 Sobic009G203000--Sobic006G210700 Sobic004G328100 Sobic004G328100 Sobic002G413500--Sobic004G328100 Sobic003G308300 Sobic003G308300 Sobic002G413500--Sobic003G308300 Sobic006G232800 Sobic006G232800 Sobic002G413500--Sobic006G232800 Sobic002G054700 Sobic002G054700 Sobic002G413500--Sobic002G054700 Sobic008G013200 Sobic008G013200 Sobic002G413500--Sobic008G013200 Sobic002G348400 Sobic002G348400 Sobic002G413500--Sobic002G348400 Sobic001G025700 Sobic001G025700 Sobic002G413500--Sobic001G025700 Sobic001G446300 Sobic001G446300 Sobic002G413500--Sobic001G446300 Sobic001G309200 Sobic001G309200 Sobic002G413500--Sobic001G309200 Sobic002G076500--Sobic007G153500 Sobic008G116700 Sobic008G116700 Sobic002G076500--Sobic008G116700 Sobic002G076500--Sobic003G432800 Sobic002G322400 Sobic002G322400 Sobic002G076500--Sobic002G322400 Sobic002G076500--Sobic006G210700 Sobic008G019532 Sobic008G019532 Sobic002G076500--Sobic008G019532 Sobic005G087300 Sobic005G087300 Sobic002G076500--Sobic005G087300 Sobic004G172500 Sobic004G172500 Sobic002G076500--Sobic004G172500 Sobic001G051400 Sobic001G051400 Sobic002G076500--Sobic001G051400 Sobic005G150600--Sobic004G172500 Sobic005G150600--Sobic010G244900 Sobic005G150600--Sobic002G076500 Sobic006G141600 Sobic006G141600 Sobic005G150600--Sobic006G141600 Sobic005G150600--Sobic007G153500 Sobic002G292900 Sobic002G292900 Sobic005G150600--Sobic002G292900 Sobic004G213800 Sobic004G213800 Sobic005G150600--Sobic004G213800 Sobic004G030400 Sobic004G030400 Sobic005G150600--Sobic004G030400 Sobic009G112300 Sobic009G112300 Sobic005G150600--Sobic009G112300 Sobic003G432800--Sobic002G076500 Sobic003G010900 Sobic003G010900 Sobic003G432800--Sobic003G010900 Sobic006G112500 Sobic006G112500 Sobic003G432800--Sobic006G112500 Sobic003G432800--Sobic001G051400 Sobic006G191200 Sobic006G191200 Sobic003G432800--Sobic006G191200 Sobic002G381900 Sobic002G381900 Sobic003G432800--Sobic002G381900 Sobic002G342300 Sobic002G342300 Sobic003G432800--Sobic002G342300 Sobic001G123600 Sobic001G123600 Sobic003G432800--Sobic001G123600 Sobic003G113300 Sobic003G113300 Sobic003G432800--Sobic003G113300 Sobic009G171200--Sobic006G210700 Sobic001G179200 Sobic001G179200 Sobic009G171200--Sobic001G179200 Sobic009G166600 Sobic009G166600 Sobic009G171200--Sobic009G166600 Sobic002G313900 Sobic002G313900 Sobic009G171200--Sobic002G313900 Sobic003G150900 Sobic003G150900 Sobic009G171200--Sobic003G150900 Sobic007G218600 Sobic007G218600 Sobic009G171200--Sobic007G218600 Sobic003G199500 Sobic003G199500 Sobic009G171200--Sobic003G199500 Sobic007G018200 Sobic007G018200 Sobic009G171200--Sobic007G018200 Sobic003G262400 Sobic003G262400 Sobic009G171200--Sobic003G262400 Sobic007G153500--Sobic002G076500 Sobic007G153500--Sobic002G322400 Sobic001G114200 Sobic001G114200 Sobic007G153500--Sobic001G114200 Sobic002G392400 Sobic002G392400 Sobic007G153500--Sobic002G392400 Sobic007G153500--Sobic005G087300 Sobic003G393200 Sobic003G393200 Sobic007G153500--Sobic003G393200 Sobic007G153500--Sobic001G025700 Sobic001G455000 Sobic001G455000 Sobic007G153500--Sobic001G455000 Sobic009G186700 Sobic009G186700 Sobic007G153500--Sobic009G186700 Sobic004G320700--Sobic002G292900 Sobic001G237600 Sobic001G237600 Sobic004G320700--Sobic001G237600 Sobic002G079000 Sobic002G079000 Sobic004G320700--Sobic002G079000 Sobic010G186100 Sobic010G186100 Sobic004G320700--Sobic010G186100 Sobic004G320700--Sobic010G244900 Sobic004G320700--Sobic006G210700 Sobic007G087000 Sobic007G087000 Sobic004G320700--Sobic007G087000 Sobic006G032300 Sobic006G032300 Sobic004G320700--Sobic006G032300 Sobic009G228000 Sobic009G228000 Sobic004G320700--Sobic009G228000 Sobic010G244900--Sobic004G172500 Sobic010G244900--Sobic002G292900 Sobic010G244900--Sobic004G213800 Sobic010G244900--Sobic001G237600 Sobic010G244900--Sobic004G320700 Sobic006G039400 Sobic006G039400 Sobic010G244900--Sobic006G039400 Sobic003G043000 Sobic003G043000 Sobic010G244900--Sobic003G043000 Sobic003G241700 Sobic003G241700 Sobic010G244900--Sobic003G241700 Sobic010G244900--Sobic005G150600 Sobic006G210700--Sobic001G114200 Sobic006G210700--Sobic009G166600 Sobic006G128100 Sobic006G128100 Sobic006G210700--Sobic006G128100 Sobic006G210700--Sobic009G186700 Sobic010G169900 Sobic010G169900 Sobic006G210700--Sobic010G169900 Sobic006G210700--Sobic002G313900 Sobic007G148400 Sobic007G148400 Sobic006G210700--Sobic007G148400 Sobic006G210700--Sobic002G076500 Sobic001G490900 Sobic001G490900 Sobic006G210700--Sobic001G490900
Octagon: transcription factors


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