Gene annotation
Transcriptome id Sobic.004G167200.1
Synonym ELM1, Sb04g021860
Functional annotation nucleoside-diphosphate-sugar epimerase, putative, expressed
UniProt C5XU00
Pfam PF06258
Panther DB PTHR33986 PTHR33986:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22350 : Protein of unknown function (DUF1022)
RAP-DB (Rice) LOC_Os02g33230.1 : nucleoside-diphosphate-sugar epimerase, putative, expressed
MaizeGDB (Corn) Zm00025a031510
Brachypodium PNT61043 , PNT61042 , PNT61041 , PNT61040 , KQJ99749 , KQJ99750 , KQJ82530 , KQJ82531 , KQJ82532
Barley HORVU2Hr1G073260.2 , HORVU2Hr1G073260.3 , HORVU2Hr1G073260.1 , HORVU2Hr1G073260.6 , HORVU2Hr1G073260.4 , HORVU2Hr1G073260.5 , HORVU2Hr1G073260.8 , HORVU2Hr1G073260.9
Wheat TraesCS2D02G293700 , TraesCS2D02G293700 , TraesCS2A02G295800 , TraesCS2A02G295800 , TraesCS2B02G312100 , TraesCS2B02G312100 , TraesCS2B02G312100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G537500 GTP-binding protein, putative, expressed K06944: uncharacterized protein
2 Sobic.001G090100 SRPK4, putative, expressed K08832: SRPK3, serine/threonine-protein kinase SRPK3
3 Sobic.006G196300 glycosyl transferase, group 1 domain containing protein, expressed K03843: alpha-1,3/alpha-1,6-mannosyltransferase
4 Sobic.006G073200 OTU-like cysteine protease family protein, putative, expressed K12655: OTUD5, OTU domain-containing protein 5
5 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
6 Sobic.001G455800 methionyl-tRNA synthetase, putative, expressed K01874: MARS, methionyl-tRNA synthetase
7 Sobic.003G194100 mitochondrial carrier protein, putative, expressed K15084: SLC25A16, GDA, solute carrier family 25 (mitochondrial carrier protein), member 16
8 Sobic.006G093300 expressed protein K02519: infB, translation initiation factor IF-2
9 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
10 Sobic.001G227400 WD domain, G-beta repeat domain containing protein, expressed -
11 Sobic.009G092400 zinc finger, C3HC4 type family protein, expressed -
12 Sobic.001G178300 DNA-binding protein, putative, expressed -
13 Sobic.008G082500 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
14 Sobic.002G371700 signal recognition particle 68 kDa protein, putative, expressed K03107: signal recognition particle subunit SRP68
15 Sobic.004G340400 translation initiation factor eIF-2B subunit epsilon, putative, expressed K03240: translation initiation factor eIF-2B subunit epsilon
16 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
17 Sobic.010G086600 cyclin-T1-4, putative, expressed K15188: cyclin T
18 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
19 Sobic.001G251100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
20 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -


Gene co-expression network
sample Sobic004G167200 Sobic004G167200 Sobic001G537500 Sobic001G537500 Sobic004G167200--Sobic001G537500 Sobic001G090100 Sobic001G090100 Sobic004G167200--Sobic001G090100 Sobic006G196300 Sobic006G196300 Sobic004G167200--Sobic006G196300 Sobic006G073200 Sobic006G073200 Sobic004G167200--Sobic006G073200 Sobic001G333100 Sobic001G333100 Sobic004G167200--Sobic001G333100 Sobic001G455800 Sobic001G455800 Sobic004G167200--Sobic001G455800 Sobic003G194100 Sobic003G194100 Sobic004G167200--Sobic003G194100 Sobic006G093300 Sobic006G093300 Sobic004G167200--Sobic006G093300 Sobic003G264100 Sobic003G264100 Sobic004G167200--Sobic003G264100 Sobic001G537500--Sobic006G073200 Sobic001G537500--Sobic004G167200 Sobic006G002800 Sobic006G002800 Sobic001G537500--Sobic006G002800 Sobic004G275600 Sobic004G275600 Sobic001G537500--Sobic004G275600 Sobic004G257100 Sobic004G257100 Sobic001G537500--Sobic004G257100 Sobic007G145400 Sobic007G145400 Sobic001G537500--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G537500--Sobic005G115500 Sobic001G178300 Sobic001G178300 Sobic001G537500--Sobic001G178300 Sobic002G246700 Sobic002G246700 Sobic001G537500--Sobic002G246700 Sobic010G000800 Sobic010G000800 Sobic001G090100--Sobic010G000800 Sobic006G077200 Sobic006G077200 Sobic001G090100--Sobic006G077200 Sobic003G314700 Sobic003G314700 Sobic001G090100--Sobic003G314700 Sobic001G090100--Sobic005G115500 Sobic003G405500 Sobic003G405500 Sobic001G090100--Sobic003G405500 Sobic001G248100 Sobic001G248100 Sobic001G090100--Sobic001G248100 Sobic003G379200 Sobic003G379200 Sobic001G090100--Sobic003G379200 Sobic003G189600 Sobic003G189600 Sobic001G090100--Sobic003G189600 Sobic009G182600 Sobic009G182600 Sobic001G090100--Sobic009G182600 Sobic006G196300--Sobic003G264100 Sobic002G405400 Sobic002G405400 Sobic006G196300--Sobic002G405400 Sobic006G196300--Sobic001G455800 Sobic002G142900 Sobic002G142900 Sobic006G196300--Sobic002G142900 Sobic010G020400 Sobic010G020400 Sobic006G196300--Sobic010G020400 Sobic006G196300--Sobic001G333100 Sobic001G227400 Sobic001G227400 Sobic006G196300--Sobic001G227400 Sobic004G241900 Sobic004G241900 Sobic006G196300--Sobic004G241900 Sobic002G303600 Sobic002G303600 Sobic006G196300--Sobic002G303600 Sobic008G157200 Sobic008G157200 Sobic006G073200--Sobic008G157200 Sobic006G073200--Sobic004G257100 Sobic001G431000 Sobic001G431000 Sobic006G073200--Sobic001G431000 Sobic006G073200--Sobic001G537500 Sobic001G493200 Sobic001G493200 Sobic006G073200--Sobic001G493200 Sobic008G135200 Sobic008G135200 Sobic006G073200--Sobic008G135200 Sobic006G036100 Sobic006G036100 Sobic006G073200--Sobic006G036100 Sobic004G131300 Sobic004G131300 Sobic006G073200--Sobic004G131300 Sobic001G251100 Sobic001G251100 Sobic006G073200--Sobic001G251100 Sobic001G333100--Sobic003G264100 Sobic002G020700 Sobic002G020700 Sobic001G333100--Sobic002G020700 Sobic003G221400 Sobic003G221400 Sobic001G333100--Sobic003G221400 Sobic001G192000 Sobic001G192000 Sobic001G333100--Sobic001G192000 Sobic001G333100--Sobic010G020400 Sobic001G333100--Sobic002G142900 Sobic010G223300 Sobic010G223300 Sobic001G333100--Sobic010G223300 Sobic001G333100--Sobic001G251100 Sobic008G033500 Sobic008G033500 Sobic001G333100--Sobic008G033500 Sobic009G016400 Sobic009G016400 Sobic001G455800--Sobic009G016400 Sobic002G150700 Sobic002G150700 Sobic001G455800--Sobic002G150700 Sobic001G455800--Sobic006G196300 Sobic004G340400 Sobic004G340400 Sobic001G455800--Sobic004G340400 Sobic002G371700 Sobic002G371700 Sobic001G455800--Sobic002G371700 Sobic001G447300 Sobic001G447300 Sobic001G455800--Sobic001G447300 Sobic001G455800--Sobic002G142900 Sobic008G160000 Sobic008G160000 Sobic001G455800--Sobic008G160000 Sobic001G145400 Sobic001G145400 Sobic001G455800--Sobic001G145400 Sobic006G280000 Sobic006G280000 Sobic003G194100--Sobic006G280000 Sobic003G104000 Sobic003G104000 Sobic003G194100--Sobic003G104000 Sobic007G005500 Sobic007G005500 Sobic003G194100--Sobic007G005500 Sobic004G145000 Sobic004G145000 Sobic003G194100--Sobic004G145000 Sobic004G261600 Sobic004G261600 Sobic003G194100--Sobic004G261600 Sobic002G256700 Sobic002G256700 Sobic003G194100--Sobic002G256700 Sobic004G322400 Sobic004G322400 Sobic003G194100--Sobic004G322400 Sobic003G209200 Sobic003G209200 Sobic003G194100--Sobic003G209200 Sobic003G337300 Sobic003G337300 Sobic003G194100--Sobic003G337300 Sobic006G039400 Sobic006G039400 Sobic006G093300--Sobic006G039400 Sobic001G434200 Sobic001G434200 Sobic006G093300--Sobic001G434200 Sobic008G185800 Sobic008G185800 Sobic006G093300--Sobic008G185800 Sobic003G241700 Sobic003G241700 Sobic006G093300--Sobic003G241700 Sobic001G283600 Sobic001G283600 Sobic006G093300--Sobic001G283600 Sobic006G093300--Sobic001G333100 Sobic003G308500 Sobic003G308500 Sobic006G093300--Sobic003G308500 Sobic003G296900 Sobic003G296900 Sobic006G093300--Sobic003G296900 Sobic006G184900 Sobic006G184900 Sobic006G093300--Sobic006G184900 Sobic003G264100--Sobic001G333100 Sobic009G109925 Sobic009G109925 Sobic003G264100--Sobic009G109925 Sobic003G264100--Sobic006G196300 Sobic002G311100 Sobic002G311100 Sobic003G264100--Sobic002G311100 Sobic006G180000 Sobic006G180000 Sobic003G264100--Sobic006G180000 Sobic009G068500 Sobic009G068500 Sobic003G264100--Sobic009G068500 Sobic003G264100--Sobic001G227400 Sobic003G264100--Sobic001G192000 Sobic003G195000 Sobic003G195000 Sobic003G264100--Sobic003G195000
Octagon: transcription factors


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