Gene annotation
Transcriptome id Sobic.004G237500.1
Synonym Sb04g027980
Functional annotation hydrolase, acting on carbon-nitrogen, putative, expressed
UniProt C5XYS8
Pfam PF04765
Panther DB PTHR12956 PTHR12956:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02910 : Protein of unknown function (DUF616)
RAP-DB (Rice) LOC_Os11g09170.1 : hydrolase, acting on carbon-nitrogen, putative, expressed
MaizeGDB (Corn) Zm00025a022037
Brachypodium PNT69639 , PNT69644 , PNT69641 , PNT69640 , PNT69643 , PNT69642 , PNT69638
Barley HORVU6Hr1G075730.6 , HORVU6Hr1G075730.7 , HORVU6Hr1G075730.4 , HORVU6Hr1G075730.5 , HORVU6Hr1G075730.2 , HORVU6Hr1G075730.3 , HORVU6Hr1G075730.1 , HORVU6Hr1G075730.8 , HORVU6Hr1G075730.9 , HORVU6Hr1G075730.18 , HORVU6Hr1G075730.19 , HORVU6Hr1G075730.14 , HORVU6Hr1G075730.15 , HORVU6Hr1G075730.16 , HORVU6Hr1G075730.17 , HORVU6Hr1G075730.10 , HORVU6Hr1G075730.11 , HORVU6Hr1G075730.12 , HORVU6Hr1G075730.13 , HORVU6Hr1G075730.21 , HORVU6Hr1G075730.20 , HORVU6Hr1G075730.23 , HORVU6Hr1G075730.22 , HORVU6Hr1G075730.25 , HORVU6Hr1G075730.24 , HORVU6Hr1G075730.26
Wheat TraesCS6D02G285900 , TraesCS6A02G306700 , TraesCS6B02G335300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G171200 PX domain containing protein, expressed -
2 Sobic.010G004001 - -
3 Sobic.003G030000 expressed protein -
4 Sobic.003G208400 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
5 Sobic.008G168000 Methyltransferase small domain containing protein, expressed K02493: hemK, prmC, release factor glutamine methyltransferase
6 Sobic.004G339000 TBC domain containing protein, expressed -
7 Sobic.004G010600 expressed protein K09602: ubiquitin thioesterase protein OTUB1
8 Sobic.010G020700 expressed protein -
9 Sobic.001G135300 expressed protein -
10 Sobic.001G042400 expressed protein -
11 Sobic.001G003700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.003G223200 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
13 Sobic.003G264000 cytidylyltransferase domain containing protein, expressed -
14 Sobic.007G193800 serine/threonine-protein kinase RIO-like, putative, expressed K07178: RIO kinase 1
15 Sobic.001G017800 vacuolar sorting protein, putative, expressed -
16 Sobic.001G339900 - -
17 Sobic.002G052500 - -
18 Sobic.010G018800 impaired sucrose induction 1, putative, expressed -
19 Sobic.006G272450 - -
20 Sobic.001G468100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G237500 Sobic004G237500 Sobic009G171200 Sobic009G171200 Sobic004G237500--Sobic009G171200 Sobic010G004001 Sobic010G004001 Sobic004G237500--Sobic010G004001 Sobic003G030000 Sobic003G030000 Sobic004G237500--Sobic003G030000 Sobic003G208400 Sobic003G208400 Sobic004G237500--Sobic003G208400 Sobic008G168000 Sobic008G168000 Sobic004G237500--Sobic008G168000 Sobic004G339000 Sobic004G339000 Sobic004G237500--Sobic004G339000 Sobic004G010600 Sobic004G010600 Sobic004G237500--Sobic004G010600 Sobic010G020700 Sobic010G020700 Sobic004G237500--Sobic010G020700 Sobic001G135300 Sobic001G135300 Sobic004G237500--Sobic001G135300 Sobic006G210700 Sobic006G210700 Sobic009G171200--Sobic006G210700 Sobic001G179200 Sobic001G179200 Sobic009G171200--Sobic001G179200 Sobic009G166600 Sobic009G166600 Sobic009G171200--Sobic009G166600 Sobic002G313900 Sobic002G313900 Sobic009G171200--Sobic002G313900 Sobic003G150900 Sobic003G150900 Sobic009G171200--Sobic003G150900 Sobic007G218600 Sobic007G218600 Sobic009G171200--Sobic007G218600 Sobic003G199500 Sobic003G199500 Sobic009G171200--Sobic003G199500 Sobic007G018200 Sobic007G018200 Sobic009G171200--Sobic007G018200 Sobic003G262400 Sobic003G262400 Sobic009G171200--Sobic003G262400 Sobic002G052500 Sobic002G052500 Sobic010G004001--Sobic002G052500 Sobic006G166300 Sobic006G166300 Sobic010G004001--Sobic006G166300 Sobic007G210400 Sobic007G210400 Sobic010G004001--Sobic007G210400 Sobic002G138500 Sobic002G138500 Sobic010G004001--Sobic002G138500 Sobic010G004001--Sobic008G168000 Sobic005G037500 Sobic005G037500 Sobic010G004001--Sobic005G037500 Sobic003G245700 Sobic003G245700 Sobic010G004001--Sobic003G245700 Sobic002G037000 Sobic002G037000 Sobic010G004001--Sobic002G037000 Sobic006G185400 Sobic006G185400 Sobic010G004001--Sobic006G185400 Sobic007G162500 Sobic007G162500 Sobic003G030000--Sobic007G162500 Sobic006G016600 Sobic006G016600 Sobic003G030000--Sobic006G016600 Sobic003G030000--Sobic009G171200 Sobic010G018800 Sobic010G018800 Sobic003G030000--Sobic010G018800 Sobic003G432800 Sobic003G432800 Sobic003G030000--Sobic003G432800 Sobic010G256433 Sobic010G256433 Sobic003G030000--Sobic010G256433 Sobic003G030000--Sobic001G135300 Sobic006G112500 Sobic006G112500 Sobic003G030000--Sobic006G112500 Sobic001G003700 Sobic001G003700 Sobic003G030000--Sobic001G003700 Sobic009G072700 Sobic009G072700 Sobic003G208400--Sobic009G072700 Sobic003G208400--Sobic010G020700 Sobic002G008800 Sobic002G008800 Sobic003G208400--Sobic002G008800 Sobic010G064600 Sobic010G064600 Sobic003G208400--Sobic010G064600 Sobic003G316200 Sobic003G316200 Sobic003G208400--Sobic003G316200 Sobic006G213800 Sobic006G213800 Sobic003G208400--Sobic006G213800 Sobic007G205900 Sobic007G205900 Sobic003G208400--Sobic007G205900 Sobic003G087000 Sobic003G087000 Sobic003G208400--Sobic003G087000 Sobic003G338500 Sobic003G338500 Sobic003G208400--Sobic003G338500 Sobic001G134600 Sobic001G134600 Sobic008G168000--Sobic001G134600 Sobic001G339900 Sobic001G339900 Sobic008G168000--Sobic001G339900 Sobic009G070900 Sobic009G070900 Sobic008G168000--Sobic009G070900 Sobic001G378550 Sobic001G378550 Sobic008G168000--Sobic001G378550 Sobic008G168000--Sobic002G052500 Sobic001G049000 Sobic001G049000 Sobic008G168000--Sobic001G049000 Sobic001G178200 Sobic001G178200 Sobic008G168000--Sobic001G178200 Sobic007G043200 Sobic007G043200 Sobic008G168000--Sobic007G043200 Sobic006G272450 Sobic006G272450 Sobic008G168000--Sobic006G272450 Sobic001G042400 Sobic001G042400 Sobic004G339000--Sobic001G042400 Sobic004G339000--Sobic010G018800 Sobic003G051800 Sobic003G051800 Sobic004G339000--Sobic003G051800 Sobic004G339000--Sobic010G256433 Sobic003G222400 Sobic003G222400 Sobic004G339000--Sobic003G222400 Sobic002G200500 Sobic002G200500 Sobic004G339000--Sobic002G200500 Sobic009G236700 Sobic009G236700 Sobic004G339000--Sobic009G236700 Sobic004G082000 Sobic004G082000 Sobic004G339000--Sobic004G082000 Sobic004G339000--Sobic006G272450 Sobic004G010600--Sobic001G135300 Sobic003G218700 Sobic003G218700 Sobic004G010600--Sobic003G218700 Sobic001G507600 Sobic001G507600 Sobic004G010600--Sobic001G507600 Sobic004G010500 Sobic004G010500 Sobic004G010600--Sobic004G010500 Sobic010G080600 Sobic010G080600 Sobic004G010600--Sobic010G080600 Sobic006G026250 Sobic006G026250 Sobic004G010600--Sobic006G026250 Sobic008G088866 Sobic008G088866 Sobic004G010600--Sobic008G088866 Sobic001G134300 Sobic001G134300 Sobic004G010600--Sobic001G134300 Sobic004G017300 Sobic004G017300 Sobic004G010600--Sobic004G017300 Sobic001G512800 Sobic001G512800 Sobic010G020700--Sobic001G512800 Sobic006G244400 Sobic006G244400 Sobic010G020700--Sobic006G244400 Sobic005G079900 Sobic005G079900 Sobic010G020700--Sobic005G079900 Sobic009G212600 Sobic009G212600 Sobic010G020700--Sobic009G212600 Sobic009G241000 Sobic009G241000 Sobic010G020700--Sobic009G241000 Sobic001G227800 Sobic001G227800 Sobic010G020700--Sobic001G227800 Sobic002G215700 Sobic002G215700 Sobic010G020700--Sobic002G215700 Sobic003G259200 Sobic003G259200 Sobic010G020700--Sobic003G259200 Sobic010G182500 Sobic010G182500 Sobic010G020700--Sobic010G182500 Sobic001G135300--Sobic004G010600 Sobic001G135300--Sobic007G162500 Sobic006G154100 Sobic006G154100 Sobic001G135300--Sobic006G154100 Sobic001G135300--Sobic003G432800 Sobic006G146900 Sobic006G146900 Sobic001G135300--Sobic006G146900 Sobic004G039900 Sobic004G039900 Sobic001G135300--Sobic004G039900 Sobic006G255900 Sobic006G255900 Sobic001G135300--Sobic006G255900 Sobic002G237700 Sobic002G237700 Sobic001G135300--Sobic002G237700 Sobic005G150900 Sobic005G150900 Sobic001G135300--Sobic005G150900
Octagon: transcription factors


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