Gene annotation
Transcriptome id Sobic.004G010600.2,Sobic.004G010600.3
Synonym Sb04g001071
Functional annotation expressed protein
UniProt A0A1Z5RKE7 , A0A1Z5RKD3
Pfam PF10275
Panther DB PTHR12931 PTHR12931:SF17
NCBI CDD KOG3991; Uncharacterized conserved protein
KEGG Orthology K09602; ubiquitin thioesterase protein OTUB1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28120 : -
RAP-DB (Rice) LOC_Os02g32190.1 : expressed protein
MaizeGDB (Corn) Zm00025a020453 , Zm00025a020454
Brachypodium PNT68710 , PNT68711 , PNT68712 , PNT68713 , PNT68714 , PNT68715 , PNT68716 , PNT76966 , PNT76967 , PNT68706 , PNT68707 , PNT68705 , PNT68709 , PNT68708
Barley HORVU6Hr1G011470.43 , HORVU6Hr1G011470.22 , HORVU6Hr1G011470.20 , HORVU6Hr1G011470.21 , HORVU6Hr1G011470.26 , HORVU6Hr1G011470.27 , HORVU6Hr1G011470.24 , HORVU6Hr1G011470.25 , HORVU6Hr1G011470.28 , HORVU6Hr1G011470.29 , HORVU0Hr1G015030.19 , HORVU0Hr1G015030.18 , HORVU0Hr1G015030.11 , HORVU0Hr1G015030.10 , HORVU0Hr1G015030.13 , HORVU0Hr1G015030.12 , HORVU0Hr1G015030.15 , HORVU0Hr1G015030.14 , HORVU0Hr1G015030.17 , HORVU0Hr1G015030.16 , HORVU3Hr1G099470.10 , HORVU3Hr1G099470.11 , HORVU3Hr1G099470.12 , HORVU3Hr1G099470.13 , HORVU3Hr1G099470.14 , HORVU3Hr1G099470.15 , HORVU3Hr1G099470.16 , HORVU3Hr1G099470.17 , HORVU3Hr1G099470.18 , HORVU6Hr1G011470.19 , HORVU6Hr1G011470.18 , HORVU6Hr1G011470.13 , HORVU6Hr1G011470.12 , HORVU6Hr1G011470.11 , HORVU6Hr1G011470.10 , HORVU6Hr1G011470.17 , HORVU6Hr1G011470.16 , HORVU6Hr1G011470.15 , HORVU6Hr1G011470.14 , HORVU0Hr1G015030.9 , HORVU0Hr1G015030.8 , HORVU0Hr1G015030.5 , HORVU0Hr1G015030.4 , HORVU0Hr1G015030.7 , HORVU0Hr1G015030.6 , HORVU0Hr1G015030.1 , HORVU0Hr1G015030.3 , HORVU0Hr1G015030.2 , HORVU3Hr1G099470.30 , HORVU0Hr1G015030.42 , HORVU0Hr1G015030.43 , HORVU0Hr1G015030.40 , HORVU0Hr1G015030.41 , HORVU0Hr1G015030.46 , HORVU0Hr1G015030.47 , HORVU0Hr1G015030.44 , HORVU0Hr1G015030.48 , HORVU6Hr1G011460.18 , HORVU6Hr1G011460.19 , HORVU6Hr1G011460.16 , HORVU6Hr1G011460.17 , HORVU6Hr1G011460.15 , HORVU6Hr1G011460.12 , HORVU6Hr1G011460.13 , HORVU6Hr1G011460.10 , HORVU6Hr1G011460.11 , HORVU3Hr1G099470.25 , HORVU3Hr1G099470.24 , HORVU3Hr1G099470.27 , HORVU3Hr1G099470.26 , HORVU3Hr1G099470.20 , HORVU3Hr1G099470.23 , HORVU3Hr1G099470.22 , HORVU3Hr1G099470.29 , HORVU3Hr1G099470.28 , HORVU2Hr1G038150.5 , HORVU2Hr1G038150.4 , HORVU2Hr1G038150.7 , HORVU2Hr1G038150.6 , HORVU2Hr1G038150.1 , HORVU2Hr1G038150.3 , HORVU2Hr1G038150.2 , HORVU2Hr1G038150.9 , HORVU2Hr1G038150.8 , HORVU6Hr1G013450.28 , HORVU6Hr1G013450.29 , HORVU6Hr1G013450.22 , HORVU6Hr1G013450.23 , HORVU6Hr1G013450.20 , HORVU6Hr1G013450.21 , HORVU6Hr1G013450.26 , HORVU6Hr1G013450.27 , HORVU6Hr1G013450.24 , HORVU6Hr1G013450.25 , HORVU0Hr1G015030.37 , HORVU0Hr1G015030.36 , HORVU0Hr1G015030.35 , HORVU0Hr1G015030.34 , HORVU0Hr1G015030.33 , HORVU0Hr1G015030.32 , HORVU0Hr1G015030.31 , HORVU0Hr1G015030.30 , HORVU0Hr1G015030.39 , HORVU0Hr1G015030.38 , HORVU6Hr1G011460.23 , HORVU6Hr1G011460.21 , HORVU6Hr1G011460.20 , HORVU6Hr1G011460.8 , HORVU6Hr1G011460.9 , HORVU6Hr1G011460.4 , HORVU6Hr1G011460.7 , HORVU6Hr1G011460.1 , HORVU6Hr1G011460.2 , HORVU6Hr1G011460.3 , HORVU6Hr1G013450.3 , HORVU6Hr1G013450.2 , HORVU6Hr1G013450.1 , HORVU6Hr1G013450.7 , HORVU6Hr1G013450.6 , HORVU6Hr1G013450.5 , HORVU6Hr1G013450.4 , HORVU6Hr1G013450.9 , HORVU6Hr1G013450.8 , HORVU6Hr1G013450.13 , HORVU6Hr1G013450.12 , HORVU6Hr1G013450.11 , HORVU6Hr1G013450.10 , HORVU6Hr1G013450.17 , HORVU6Hr1G013450.16 , HORVU6Hr1G013450.15 , HORVU6Hr1G013450.14 , HORVU6Hr1G013450.19 , HORVU6Hr1G013450.18 , HORVU6Hr1G011470.9 , HORVU6Hr1G011470.3 , HORVU6Hr1G011470.2 , HORVU6Hr1G011470.1 , HORVU6Hr1G011470.6 , HORVU6Hr1G011470.5 , HORVU6Hr1G011470.4 , HORVU2Hr1G038150.24 , HORVU2Hr1G038150.25 , HORVU2Hr1G038150.20 , HORVU2Hr1G038150.21 , HORVU2Hr1G038150.22 , HORVU2Hr1G038150.23 , HORVU6Hr1G011470.40 , HORVU6Hr1G011470.41 , HORVU6Hr1G011470.42 , HORVU3Hr1G099470.32 , HORVU3Hr1G099470.33 , HORVU3Hr1G099470.34 , HORVU6Hr1G011470.39 , HORVU6Hr1G011470.38 , HORVU6Hr1G011470.35 , HORVU6Hr1G011470.34 , HORVU6Hr1G011470.37 , HORVU6Hr1G011470.36 , HORVU6Hr1G011470.31 , HORVU6Hr1G011470.30 , HORVU6Hr1G011470.33 , HORVU6Hr1G011470.32 , HORVU0Hr1G015030.24 , HORVU0Hr1G015030.25 , HORVU0Hr1G015030.26 , HORVU0Hr1G015030.27 , HORVU0Hr1G015030.20 , HORVU0Hr1G015030.21 , HORVU0Hr1G015030.22 , HORVU0Hr1G015030.23 , HORVU0Hr1G015030.28 , HORVU0Hr1G015030.29 , HORVU3Hr1G099470.2 , HORVU3Hr1G099470.3 , HORVU3Hr1G099470.1 , HORVU3Hr1G099470.6 , HORVU3Hr1G099470.7 , HORVU3Hr1G099470.4 , HORVU3Hr1G099470.5 , HORVU3Hr1G099470.8 , HORVU3Hr1G099470.9 , HORVU3Hr1G099470.19 , HORVU2Hr1G038150.11 , HORVU2Hr1G038150.10 , HORVU2Hr1G038150.13 , HORVU2Hr1G038150.12 , HORVU2Hr1G038150.15 , HORVU2Hr1G038150.14 , HORVU2Hr1G038150.17 , HORVU2Hr1G038150.16 , HORVU2Hr1G038150.18
Wheat TraesCS3A02G465400 , TraesCS2A02G196800 , TraesCS6D02G063900 , TraesCS6B02G101800 , TraesCS3D02G460600 , TraesCS3B02G509600 , TraesCS6D02G064700 , TraesCS6D02G064800 , TraesCS6B02G080900 , TraesCS6B02G080300 , TraesCS6B02G081500 , TraesCS2B02G224400 , TraesCS2D02G204800 , TraesCS6A02G060900 , TraesCS6A02G061100 , TraesCS3A02G465600 , TraesCS3A02G465600 , TraesCS3D02G460800 , TraesCS2D02G096500 , TraesCS2A02G273400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G135300 expressed protein -
2 Sobic.003G218700 LSD1 zinc finger domain containing protein, expressed -
3 Sobic.001G507600 cysteinyl-tRNA synthetase, putative, expressed K01883: CARS, cysteinyl-tRNA synthetase
4 Sobic.004G010500 OsFBX52 - F-box domain containing protein, expressed -
5 Sobic.010G080600 - -
6 Sobic.006G026250 - -
7 Sobic.008G088866 - -
8 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
9 Sobic.004G017300 adaptor complexes medium subunit family domain containing protein, expressed K12398: AP-3 complex subunit mu
10 Sobic.008G092800 expressed protein -
11 Sobic.008G002500 RCD1, putative, expressed -
12 Sobic.007G074600 tetratricopeptide repeat domain containing protein, expressed K15201: GTP3C3, general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
13 Sobic.006G154100 mRNA cap guanine-N7 methyltransferase 2, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
14 Sobic.009G088000 expressed protein -
15 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
16 Sobic.001G063700 expressed protein -
17 Sobic.004G351600 expressed protein K18734: protein SMG8
18 Sobic.002G375900 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
19 Sobic.002G234600 ZOS9-15 - C2H2 zinc finger protein, expressed -
20 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)


Gene co-expression network
sample Sobic004G010600 Sobic004G010600 Sobic001G135300 Sobic001G135300 Sobic004G010600--Sobic001G135300 Sobic003G218700 Sobic003G218700 Sobic004G010600--Sobic003G218700 Sobic001G507600 Sobic001G507600 Sobic004G010600--Sobic001G507600 Sobic004G010500 Sobic004G010500 Sobic004G010600--Sobic004G010500 Sobic010G080600 Sobic010G080600 Sobic004G010600--Sobic010G080600 Sobic006G026250 Sobic006G026250 Sobic004G010600--Sobic006G026250 Sobic008G088866 Sobic008G088866 Sobic004G010600--Sobic008G088866 Sobic001G134300 Sobic001G134300 Sobic004G010600--Sobic001G134300 Sobic004G017300 Sobic004G017300 Sobic004G010600--Sobic004G017300 Sobic001G135300--Sobic004G010600 Sobic007G162500 Sobic007G162500 Sobic001G135300--Sobic007G162500 Sobic006G154100 Sobic006G154100 Sobic001G135300--Sobic006G154100 Sobic003G432800 Sobic003G432800 Sobic001G135300--Sobic003G432800 Sobic006G146900 Sobic006G146900 Sobic001G135300--Sobic006G146900 Sobic004G039900 Sobic004G039900 Sobic001G135300--Sobic004G039900 Sobic006G255900 Sobic006G255900 Sobic001G135300--Sobic006G255900 Sobic002G237700 Sobic002G237700 Sobic001G135300--Sobic002G237700 Sobic005G150900 Sobic005G150900 Sobic001G135300--Sobic005G150900 Sobic002G079100 Sobic002G079100 Sobic003G218700--Sobic002G079100 Sobic005G111000 Sobic005G111000 Sobic003G218700--Sobic005G111000 Sobic006G280100 Sobic006G280100 Sobic003G218700--Sobic006G280100 Sobic002G234600 Sobic002G234600 Sobic003G218700--Sobic002G234600 Sobic008G017100 Sobic008G017100 Sobic003G218700--Sobic008G017100 Sobic010G262100 Sobic010G262100 Sobic003G218700--Sobic010G262100 Sobic010G138900 Sobic010G138900 Sobic003G218700--Sobic010G138900 Sobic008G088842 Sobic008G088842 Sobic003G218700--Sobic008G088842 Sobic003G218700--Sobic001G134300 Sobic010G143100 Sobic010G143100 Sobic001G507600--Sobic010G143100 Sobic003G188400 Sobic003G188400 Sobic001G507600--Sobic003G188400 Sobic001G311500 Sobic001G311500 Sobic001G507600--Sobic001G311500 Sobic007G074600 Sobic007G074600 Sobic001G507600--Sobic007G074600 Sobic010G139000 Sobic010G139000 Sobic001G507600--Sobic010G139000 Sobic004G209600 Sobic004G209600 Sobic001G507600--Sobic004G209600 Sobic009G260500 Sobic009G260500 Sobic001G507600--Sobic009G260500 Sobic010G277500 Sobic010G277500 Sobic001G507600--Sobic010G277500 Sobic005G191900 Sobic005G191900 Sobic001G507600--Sobic005G191900 Sobic001G346900 Sobic001G346900 Sobic004G010500--Sobic001G346900 Sobic007G102500 Sobic007G102500 Sobic004G010500--Sobic007G102500 Sobic002G127900 Sobic002G127900 Sobic004G010500--Sobic002G127900 Sobic005G108000 Sobic005G108000 Sobic004G010500--Sobic005G108000 Sobic005G045700 Sobic005G045700 Sobic004G010500--Sobic005G045700 Sobic010G264900 Sobic010G264900 Sobic004G010500--Sobic010G264900 Sobic002G252100 Sobic002G252100 Sobic004G010500--Sobic002G252100 Sobic002G127200 Sobic002G127200 Sobic004G010500--Sobic002G127200 Sobic006G245900 Sobic006G245900 Sobic004G010500--Sobic006G245900 Sobic010G080600--Sobic003G218700 Sobic010G038100 Sobic010G038100 Sobic010G080600--Sobic010G038100 Sobic007G171100 Sobic007G171100 Sobic010G080600--Sobic007G171100 Sobic010G080600--Sobic004G010600 Sobic002G364000 Sobic002G364000 Sobic010G080600--Sobic002G364000 Sobic004G078300 Sobic004G078300 Sobic010G080600--Sobic004G078300 Sobic006G275000 Sobic006G275000 Sobic010G080600--Sobic006G275000 Sobic010G080600--Sobic010G262100 Sobic010G080600--Sobic001G507600 Sobic003G308500 Sobic003G308500 Sobic006G026250--Sobic003G308500 Sobic001G340000 Sobic001G340000 Sobic006G026250--Sobic001G340000 Sobic009G255700 Sobic009G255700 Sobic006G026250--Sobic009G255700 Sobic003G296900 Sobic003G296900 Sobic006G026250--Sobic003G296900 Sobic003G441900 Sobic003G441900 Sobic006G026250--Sobic003G441900 Sobic001G065100 Sobic001G065100 Sobic006G026250--Sobic001G065100 Sobic003G120300 Sobic003G120300 Sobic006G026250--Sobic003G120300 Sobic003G095900 Sobic003G095900 Sobic006G026250--Sobic003G095900 Sobic006G125500 Sobic006G125500 Sobic006G026250--Sobic006G125500 Sobic008G088866--Sobic007G171100 Sobic007G071400 Sobic007G071400 Sobic008G088866--Sobic007G071400 Sobic008G088866--Sobic004G010600 Sobic009G184600 Sobic009G184600 Sobic008G088866--Sobic009G184600 Sobic008G088866--Sobic010G080600 Sobic003G309050 Sobic003G309050 Sobic008G088866--Sobic003G309050 Sobic008G088866--Sobic001G507600 Sobic005G098800 Sobic005G098800 Sobic008G088866--Sobic005G098800 Sobic009G185700 Sobic009G185700 Sobic008G088866--Sobic009G185700 Sobic010G065300 Sobic010G065300 Sobic001G134300--Sobic010G065300 Sobic001G306900 Sobic001G306900 Sobic001G134300--Sobic001G306900 Sobic010G001100 Sobic010G001100 Sobic001G134300--Sobic010G001100 Sobic004G156500 Sobic004G156500 Sobic001G134300--Sobic004G156500 Sobic004G086200 Sobic004G086200 Sobic001G134300--Sobic004G086200 Sobic001G398800 Sobic001G398800 Sobic001G134300--Sobic001G398800 Sobic001G090800 Sobic001G090800 Sobic001G134300--Sobic001G090800 Sobic001G134300--Sobic001G346900 Sobic002G153700 Sobic002G153700 Sobic001G134300--Sobic002G153700 Sobic004G017300--Sobic006G154100 Sobic001G393700 Sobic001G393700 Sobic004G017300--Sobic001G393700 Sobic001G369000 Sobic001G369000 Sobic004G017300--Sobic001G369000 Sobic003G006400 Sobic003G006400 Sobic004G017300--Sobic003G006400 Sobic002G111600 Sobic002G111600 Sobic004G017300--Sobic002G111600 Sobic001G145400 Sobic001G145400 Sobic004G017300--Sobic001G145400 Sobic006G166200 Sobic006G166200 Sobic004G017300--Sobic006G166200 Sobic008G124800 Sobic008G124800 Sobic004G017300--Sobic008G124800 Sobic001G335900 Sobic001G335900 Sobic004G017300--Sobic001G335900
Octagon: transcription factors


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