Gene annotation
Transcriptome id Sobic.010G080600.1
Synonym
Functional annotation -
UniProt A0A194YI00
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G080600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G218700 LSD1 zinc finger domain containing protein, expressed -
2 Sobic.010G038100 OsFBDUF30 - F-box and DUF domain containing protein, expressed -
3 Sobic.007G171100 peptidylprolyl isomerase domain and WD repeat-containing protein 1, putative, expressed K12736: peptidylprolyl isomerase domain and WD repeat-containing protein 1
4 Sobic.004G010600 expressed protein K09602: ubiquitin thioesterase protein OTUB1
5 Sobic.002G364000 myosin heavy chain-related, putative, expressed -
6 Sobic.004G078300 expressed protein -
7 Sobic.006G275000 tubulin/FtsZ domain containing protein, putative, expressed K03531: cell division protein FtsZ
8 Sobic.010G262100 expressed protein -
9 Sobic.001G507600 cysteinyl-tRNA synthetase, putative, expressed K01883: CARS, cysteinyl-tRNA synthetase
10 Sobic.005G163100 dnaJ domain containing protein, expressed -
11 Sobic.008G132900 expressed protein -
12 Sobic.006G080400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11851: ubiquitin carboxyl-terminal hydrolase 30
13 Sobic.003G016900 splicing factor 3B subunit 1, putative, expressed K12828: SF3B1, splicing factor 3B subunit 1
14 Sobic.001G451300 NUP155, putative, expressed K14312: NUP155, NUP170, nuclear pore complex protein Nup155
15 Sobic.010G094700 aberrant root formation protein 4, putative, expressed -
16 Sobic.003G207200 OsFBD2 - F-box and FBD domain containing protein, expressed -
17 Sobic.002G031700 - -
18 Sobic.007G071400 PPR repeat domain containing protein, putative, expressed -
19 Sobic.010G079500 PHD-finger domain containing protein, putative, expressed -
20 Sobic.006G119400 SWIM zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic010G080600 Sobic010G080600 Sobic003G218700 Sobic003G218700 Sobic010G080600--Sobic003G218700 Sobic010G038100 Sobic010G038100 Sobic010G080600--Sobic010G038100 Sobic007G171100 Sobic007G171100 Sobic010G080600--Sobic007G171100 Sobic004G010600 Sobic004G010600 Sobic010G080600--Sobic004G010600 Sobic002G364000 Sobic002G364000 Sobic010G080600--Sobic002G364000 Sobic004G078300 Sobic004G078300 Sobic010G080600--Sobic004G078300 Sobic006G275000 Sobic006G275000 Sobic010G080600--Sobic006G275000 Sobic010G262100 Sobic010G262100 Sobic010G080600--Sobic010G262100 Sobic001G507600 Sobic001G507600 Sobic010G080600--Sobic001G507600 Sobic002G079100 Sobic002G079100 Sobic003G218700--Sobic002G079100 Sobic005G111000 Sobic005G111000 Sobic003G218700--Sobic005G111000 Sobic006G280100 Sobic006G280100 Sobic003G218700--Sobic006G280100 Sobic002G234600 Sobic002G234600 Sobic003G218700--Sobic002G234600 Sobic008G017100 Sobic008G017100 Sobic003G218700--Sobic008G017100 Sobic003G218700--Sobic010G262100 Sobic010G138900 Sobic010G138900 Sobic003G218700--Sobic010G138900 Sobic008G088842 Sobic008G088842 Sobic003G218700--Sobic008G088842 Sobic001G134300 Sobic001G134300 Sobic003G218700--Sobic001G134300 Sobic005G200900 Sobic005G200900 Sobic010G038100--Sobic005G200900 Sobic010G026600 Sobic010G026600 Sobic010G038100--Sobic010G026600 Sobic001G440100 Sobic001G440100 Sobic010G038100--Sobic001G440100 Sobic004G235300 Sobic004G235300 Sobic010G038100--Sobic004G235300 Sobic006G080400 Sobic006G080400 Sobic010G038100--Sobic006G080400 Sobic008G002500 Sobic008G002500 Sobic010G038100--Sobic008G002500 Sobic001G501800 Sobic001G501800 Sobic010G038100--Sobic001G501800 Sobic003G101700 Sobic003G101700 Sobic010G038100--Sobic003G101700 Sobic009G185700 Sobic009G185700 Sobic010G038100--Sobic009G185700 Sobic007G071400 Sobic007G071400 Sobic007G171100--Sobic007G071400 Sobic010G053600 Sobic010G053600 Sobic007G171100--Sobic010G053600 Sobic001G352900 Sobic001G352900 Sobic007G171100--Sobic001G352900 Sobic002G043100 Sobic002G043100 Sobic007G171100--Sobic002G043100 Sobic007G171100--Sobic008G017100 Sobic004G019200 Sobic004G019200 Sobic007G171100--Sobic004G019200 Sobic010G174700 Sobic010G174700 Sobic007G171100--Sobic010G174700 Sobic001G020000 Sobic001G020000 Sobic007G171100--Sobic001G020000 Sobic006G036100 Sobic006G036100 Sobic007G171100--Sobic006G036100 Sobic001G135300 Sobic001G135300 Sobic004G010600--Sobic001G135300 Sobic004G010600--Sobic003G218700 Sobic004G010600--Sobic001G507600 Sobic004G010500 Sobic004G010500 Sobic004G010600--Sobic004G010500 Sobic004G010600--Sobic010G080600 Sobic006G026250 Sobic006G026250 Sobic004G010600--Sobic006G026250 Sobic008G088866 Sobic008G088866 Sobic004G010600--Sobic008G088866 Sobic004G010600--Sobic001G134300 Sobic004G017300 Sobic004G017300 Sobic004G010600--Sobic004G017300 Sobic009G255800 Sobic009G255800 Sobic002G364000--Sobic009G255800 Sobic007G043200 Sobic007G043200 Sobic002G364000--Sobic007G043200 Sobic002G364000--Sobic004G078300 Sobic002G364000--Sobic010G080600 Sobic007G193800 Sobic007G193800 Sobic002G364000--Sobic007G193800 Sobic006G169800 Sobic006G169800 Sobic002G364000--Sobic006G169800 Sobic010G131000 Sobic010G131000 Sobic002G364000--Sobic010G131000 Sobic002G388500 Sobic002G388500 Sobic002G364000--Sobic002G388500 Sobic002G364000--Sobic007G071400 Sobic004G077600 Sobic004G077600 Sobic004G078300--Sobic004G077600 Sobic003G219400 Sobic003G219400 Sobic004G078300--Sobic003G219400 Sobic004G078300--Sobic003G218700 Sobic001G274700 Sobic001G274700 Sobic004G078300--Sobic001G274700 Sobic006G080000 Sobic006G080000 Sobic004G078300--Sobic006G080000 Sobic003G045200 Sobic003G045200 Sobic004G078300--Sobic003G045200 Sobic004G078300--Sobic002G364000 Sobic004G078300--Sobic010G080600 Sobic004G031400 Sobic004G031400 Sobic004G078300--Sobic004G031400 Sobic009G005400 Sobic009G005400 Sobic006G275000--Sobic009G005400 Sobic009G105200 Sobic009G105200 Sobic006G275000--Sobic009G105200 Sobic001G393900 Sobic001G393900 Sobic006G275000--Sobic001G393900 Sobic006G275000--Sobic008G017100 Sobic005G026400 Sobic005G026400 Sobic006G275000--Sobic005G026400 Sobic004G354000 Sobic004G354000 Sobic006G275000--Sobic004G354000 Sobic007G225000 Sobic007G225000 Sobic006G275000--Sobic007G225000 Sobic006G275000--Sobic010G262100 Sobic010G224700 Sobic010G224700 Sobic006G275000--Sobic010G224700 Sobic001G451300 Sobic001G451300 Sobic010G262100--Sobic001G451300 Sobic010G262100--Sobic010G138900 Sobic001G248100 Sobic001G248100 Sobic010G262100--Sobic001G248100 Sobic008G080500 Sobic008G080500 Sobic010G262100--Sobic008G080500 Sobic010G262100--Sobic002G043100 Sobic002G399800 Sobic002G399800 Sobic010G262100--Sobic002G399800 Sobic002G371600 Sobic002G371600 Sobic010G262100--Sobic002G371600 Sobic003G314700 Sobic003G314700 Sobic010G262100--Sobic003G314700 Sobic008G092800 Sobic008G092800 Sobic010G262100--Sobic008G092800 Sobic010G143100 Sobic010G143100 Sobic001G507600--Sobic010G143100 Sobic003G188400 Sobic003G188400 Sobic001G507600--Sobic003G188400 Sobic001G311500 Sobic001G311500 Sobic001G507600--Sobic001G311500 Sobic007G074600 Sobic007G074600 Sobic001G507600--Sobic007G074600 Sobic010G139000 Sobic010G139000 Sobic001G507600--Sobic010G139000 Sobic004G209600 Sobic004G209600 Sobic001G507600--Sobic004G209600 Sobic009G260500 Sobic009G260500 Sobic001G507600--Sobic009G260500 Sobic010G277500 Sobic010G277500 Sobic001G507600--Sobic010G277500 Sobic005G191900 Sobic005G191900 Sobic001G507600--Sobic005G191900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.