Gene annotation
Transcriptome id Sobic.003G062800.1
Synonym SCPL27, Sb03g005360
Functional annotation OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed
UniProt C5XP86
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF106
NCBI CDD -
KEGG Orthology K16297; serine carboxypeptidase-like clade II
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT2G35780 : serine carboxypeptidase-like 26
RAP-DB (Rice) LOC_Os01g06490.1 : OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a025628 , Zm00025a023353 , Zm00025a035659 , Zm00025a032080
Brachypodium KQK07419 , KQK02237 , PNT69782 , PNT69783
Barley HORVU5Hr1G069460.1 , HORVU5Hr1G069470.4 , HORVU3Hr1G025680.6 , HORVU3Hr1G025680.7 , HORVU3Hr1G025680.2
Wheat TraesCS6A02G220200 , TraesCS3B02G481300 , TraesCS5B02G242600 , TraesCS3B02G153200 , TraesCS3B02G153200 , TraesCS3B02G153200 , TraesCS6D02G215000 , TraesCS3A02G310100 , TraesCS5A02G245000 , TraesCS6B02G261700 , TraesCS6B02G261700 , TraesCS3D02G438800 , TraesCS5D02G251700 , TraesCS5D02G251600 , TraesCS3D02G135900 , TraesCS3D02G135900
Populus -


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cDNA sequences
Sobic.003G062800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G185600 expressed protein -
2 Sobic.001G489700 prenyltransferase, putative, expressed K02257: COX10, ctaB, heme o synthase
3 Sobic.001G291100 tetraspanin family protein, putative, expressed -
4 Sobic.006G252100 mediator of RNA polymerase II transcription subunit 7, putative, expressed K15148: mediator of RNA polymerase II transcription subunit 7
5 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
6 Sobic.004G291400 rho guanine nucleotide exchange factor, putative, expressed -
7 Sobic.003G314100 AGAP000951-PA, putative, expressed -
8 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
9 Sobic.002G268400 expressed protein -
10 Sobic.006G250900 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
11 Sobic.006G270900 acyl-CoA-binding domain-containing protein 6, putative, expressed -
12 Sobic.007G187200 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.001G096300 deoxyhypusine synthase, putative, expressed K00809: DHPS, deoxyhypusine synthase
14 Sobic.001G464100 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
15 Sobic.001G307900 LYR motif containing protein, putative, expressed K18167: succinate dehydrogenase assembly factor 1
16 Sobic.009G050900 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed K10532: heparan-alpha-glucosaminide N-acetyltransferase
17 Sobic.001G226100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
18 Sobic.010G172500 ATP synthase, putative, expressed K02147: ATPeV1B, V-type H+-transporting ATPase subunit B
19 Sobic.003G380400 expressed protein -
20 Sobic.007G203200 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR


Gene co-expression network
sample Sobic003G062800 Sobic003G062800 Sobic004G185600 Sobic004G185600 Sobic003G062800--Sobic004G185600 Sobic001G489700 Sobic001G489700 Sobic003G062800--Sobic001G489700 Sobic001G291100 Sobic001G291100 Sobic003G062800--Sobic001G291100 Sobic006G252100 Sobic006G252100 Sobic003G062800--Sobic006G252100 Sobic010G249300 Sobic010G249300 Sobic003G062800--Sobic010G249300 Sobic004G291400 Sobic004G291400 Sobic003G062800--Sobic004G291400 Sobic003G314100 Sobic003G314100 Sobic003G062800--Sobic003G314100 Sobic001G263000 Sobic001G263000 Sobic003G062800--Sobic001G263000 Sobic002G268400 Sobic002G268400 Sobic003G062800--Sobic002G268400 Sobic004G185600--Sobic010G249300 Sobic001G201400 Sobic001G201400 Sobic004G185600--Sobic001G201400 Sobic010G146600 Sobic010G146600 Sobic004G185600--Sobic010G146600 Sobic001G281600 Sobic001G281600 Sobic004G185600--Sobic001G281600 Sobic009G050900 Sobic009G050900 Sobic004G185600--Sobic009G050900 Sobic004G185600--Sobic001G291100 Sobic002G378200 Sobic002G378200 Sobic004G185600--Sobic002G378200 Sobic008G004400 Sobic008G004400 Sobic004G185600--Sobic008G004400 Sobic001G142100 Sobic001G142100 Sobic004G185600--Sobic001G142100 Sobic008G165000 Sobic008G165000 Sobic001G489700--Sobic008G165000 Sobic001G489700--Sobic002G378200 Sobic001G047400 Sobic001G047400 Sobic001G489700--Sobic001G047400 Sobic001G307900 Sobic001G307900 Sobic001G489700--Sobic001G307900 Sobic004G010900 Sobic004G010900 Sobic001G489700--Sobic004G010900 Sobic009G257200 Sobic009G257200 Sobic001G489700--Sobic009G257200 Sobic006G250900 Sobic006G250900 Sobic001G489700--Sobic006G250900 Sobic002G040700 Sobic002G040700 Sobic001G489700--Sobic002G040700 Sobic002G281300 Sobic002G281300 Sobic001G489700--Sobic002G281300 Sobic009G157200 Sobic009G157200 Sobic001G291100--Sobic009G157200 Sobic001G291100--Sobic001G281600 Sobic004G119000 Sobic004G119000 Sobic001G291100--Sobic004G119000 Sobic010G056200 Sobic010G056200 Sobic001G291100--Sobic010G056200 Sobic001G119300 Sobic001G119300 Sobic001G291100--Sobic001G119300 Sobic004G150400 Sobic004G150400 Sobic001G291100--Sobic004G150400 Sobic001G107500 Sobic001G107500 Sobic001G291100--Sobic001G107500 Sobic006G088100 Sobic006G088100 Sobic001G291100--Sobic006G088100 Sobic004G083700 Sobic004G083700 Sobic001G291100--Sobic004G083700 Sobic006G252100--Sobic002G268400 Sobic001G152000 Sobic001G152000 Sobic006G252100--Sobic001G152000 Sobic009G033900 Sobic009G033900 Sobic006G252100--Sobic009G033900 Sobic006G216000 Sobic006G216000 Sobic006G252100--Sobic006G216000 Sobic003G220700 Sobic003G220700 Sobic006G252100--Sobic003G220700 Sobic006G094600 Sobic006G094600 Sobic006G252100--Sobic006G094600 Sobic001G226100 Sobic001G226100 Sobic006G252100--Sobic001G226100 Sobic004G074300 Sobic004G074300 Sobic006G252100--Sobic004G074300 Sobic001G370300 Sobic001G370300 Sobic006G252100--Sobic001G370300 Sobic010G249300--Sobic004G185600 Sobic010G249300--Sobic010G146600 Sobic002G317300 Sobic002G317300 Sobic010G249300--Sobic002G317300 Sobic008G083000 Sobic008G083000 Sobic010G249300--Sobic008G083000 Sobic010G249300--Sobic001G291100 Sobic010G249300--Sobic001G281600 Sobic006G047100 Sobic006G047100 Sobic010G249300--Sobic006G047100 Sobic001G464100 Sobic001G464100 Sobic010G249300--Sobic001G464100 Sobic010G249300--Sobic009G050900 Sobic005G105500 Sobic005G105500 Sobic004G291400--Sobic005G105500 Sobic004G291400--Sobic006G216000 Sobic006G002201 Sobic006G002201 Sobic004G291400--Sobic006G002201 Sobic006G020900 Sobic006G020900 Sobic004G291400--Sobic006G020900 Sobic003G196800 Sobic003G196800 Sobic004G291400--Sobic003G196800 Sobic004G124100 Sobic004G124100 Sobic004G291400--Sobic004G124100 Sobic002G341800 Sobic002G341800 Sobic004G291400--Sobic002G341800 Sobic005G111900 Sobic005G111900 Sobic004G291400--Sobic005G111900 Sobic009G234400 Sobic009G234400 Sobic004G291400--Sobic009G234400 Sobic010G057900 Sobic010G057900 Sobic003G314100--Sobic010G057900 Sobic003G314100--Sobic002G268400 Sobic003G314100--Sobic006G250900 Sobic006G101700 Sobic006G101700 Sobic003G314100--Sobic006G101700 Sobic004G356900 Sobic004G356900 Sobic003G314100--Sobic004G356900 Sobic003G314100--Sobic001G263000 Sobic009G165800 Sobic009G165800 Sobic003G314100--Sobic009G165800 Sobic003G226500 Sobic003G226500 Sobic003G314100--Sobic003G226500 Sobic003G314100--Sobic001G281600 Sobic009G004600 Sobic009G004600 Sobic001G263000--Sobic009G004600 Sobic006G244700 Sobic006G244700 Sobic001G263000--Sobic006G244700 Sobic001G263000--Sobic009G033900 Sobic002G209400 Sobic002G209400 Sobic001G263000--Sobic002G209400 Sobic001G263000--Sobic002G268400 Sobic002G039000 Sobic002G039000 Sobic001G263000--Sobic002G039000 Sobic001G263000--Sobic004G074300 Sobic001G263000--Sobic004G356900 Sobic001G263000--Sobic010G057900 Sobic002G268400--Sobic010G057900 Sobic002G268400--Sobic001G152000 Sobic002G268400--Sobic004G074300 Sobic002G268400--Sobic006G252100 Sobic002G268400--Sobic009G033900 Sobic006G270900 Sobic006G270900 Sobic002G268400--Sobic006G270900 Sobic006G183000 Sobic006G183000 Sobic002G268400--Sobic006G183000 Sobic002G268400--Sobic004G356900 Sobic003G439800 Sobic003G439800 Sobic002G268400--Sobic003G439800
Octagon: transcription factors


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