Gene annotation
Transcriptome id Sobic.003G071700.6,Sobic.003G071700.2,Sobic.003G071700.4,Sobic.003G071700.5,Sobic.003G071700.1,Sobic.003G071700.3
Synonym Sb03g006080
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6Q1T0 , A0A1W0VVZ9 , A0A1B6Q1T1
Pfam PF14309
Panther DB PTHR21726 PTHR21726:SF38
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02390 : Protein of unknown function (DUF3741)
RAP-DB (Rice) LOC_Os01g05660.2,LOC_Os01g05660.1,LOC_Os01g05660.3 : expressed protein
MaizeGDB (Corn) Zm00025a023461 , Zm00025a035621
Brachypodium KQK02722 , KQK02723 , KQK02724 , KQK02725 , PNT69939 , PNT69938 , PNT69940 , PNT69941
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G071700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G376300 FYVE zinc finger family protein, expressed -
2 Sobic.006G148200 glycosyl transferase 8 domain containing protein, putative, expressed -
3 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
4 Sobic.003G219500 adaptin ear-binding coat-associated protein 2, putative, expressed -
5 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
6 Sobic.004G072800 expressed protein -
7 Sobic.001G372000 OsFBT5 - F-box and tubby domain containing protein, expressed -
8 Sobic.001G078800 similar to Serine/threonine-protein kinase SAPK8(PubMedID : 29862293)@CAMK_CAMK_like.22 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
9 Sobic.006G264500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
10 Sobic.001G048700 TBC domain containing protein, expressed -
11 Sobic.001G045000 CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
12 Sobic.003G261400 DUF292 domain containing protein, expressed -
13 Sobic.008G125200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipase class 3 family protein, putative, expressed -
14 Sobic.001G526100 uncharacterized Cys-rich domain containing protein, putative, expressed -
15 Sobic.004G021300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.006G232000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
17 Sobic.006G242300 - -
18 Sobic.001G524500 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K00861: RFK, riboflavin kinase
19 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
20 Sobic.009G045800 bifunctional protein folD, putative, expressed -


Gene co-expression network
sample Sobic003G071700 Sobic003G071700 Sobic002G376300 Sobic002G376300 Sobic003G071700--Sobic002G376300 Sobic006G148200 Sobic006G148200 Sobic003G071700--Sobic006G148200 Sobic001G067900 Sobic001G067900 Sobic003G071700--Sobic001G067900 Sobic003G219500 Sobic003G219500 Sobic003G071700--Sobic003G219500 Sobic003G007500 Sobic003G007500 Sobic003G071700--Sobic003G007500 Sobic004G072800 Sobic004G072800 Sobic003G071700--Sobic004G072800 Sobic001G372000 Sobic001G372000 Sobic003G071700--Sobic001G372000 Sobic001G078800 Sobic001G078800 Sobic003G071700--Sobic001G078800 Sobic006G264500 Sobic006G264500 Sobic003G071700--Sobic006G264500 Sobic009G238800 Sobic009G238800 Sobic002G376300--Sobic009G238800 Sobic001G048700 Sobic001G048700 Sobic002G376300--Sobic001G048700 Sobic002G376300--Sobic003G219500 Sobic002G378200 Sobic002G378200 Sobic002G376300--Sobic002G378200 Sobic007G118000 Sobic007G118000 Sobic002G376300--Sobic007G118000 Sobic009G054700 Sobic009G054700 Sobic002G376300--Sobic009G054700 Sobic007G115900 Sobic007G115900 Sobic002G376300--Sobic007G115900 Sobic002G376300--Sobic006G148200 Sobic002G376300--Sobic001G067900 Sobic004G274400 Sobic004G274400 Sobic006G148200--Sobic004G274400 Sobic001G085100 Sobic001G085100 Sobic006G148200--Sobic001G085100 Sobic006G034000 Sobic006G034000 Sobic006G148200--Sobic006G034000 Sobic001G323000 Sobic001G323000 Sobic006G148200--Sobic001G323000 Sobic009G228700 Sobic009G228700 Sobic006G148200--Sobic009G228700 Sobic001G033500 Sobic001G033500 Sobic006G148200--Sobic001G033500 Sobic001G206900 Sobic001G206900 Sobic006G148200--Sobic001G206900 Sobic010G000900 Sobic010G000900 Sobic006G148200--Sobic010G000900 Sobic006G148200--Sobic001G048700 Sobic001G105100 Sobic001G105100 Sobic001G067900--Sobic001G105100 Sobic001G067900--Sobic004G072800 Sobic006G257001 Sobic006G257001 Sobic001G067900--Sobic006G257001 Sobic002G281300 Sobic002G281300 Sobic001G067900--Sobic002G281300 Sobic003G217100 Sobic003G217100 Sobic001G067900--Sobic003G217100 Sobic006G034800 Sobic006G034800 Sobic001G067900--Sobic006G034800 Sobic006G250900 Sobic006G250900 Sobic001G067900--Sobic006G250900 Sobic010G205300 Sobic010G205300 Sobic001G067900--Sobic010G205300 Sobic001G237500 Sobic001G237500 Sobic001G067900--Sobic001G237500 Sobic003G219500--Sobic002G376300 Sobic003G400100 Sobic003G400100 Sobic003G219500--Sobic003G400100 Sobic001G127000 Sobic001G127000 Sobic003G219500--Sobic001G127000 Sobic003G219500--Sobic009G238800 Sobic003G219500--Sobic002G378200 Sobic003G219500--Sobic001G067900 Sobic003G187200 Sobic003G187200 Sobic003G219500--Sobic003G187200 Sobic003G051200 Sobic003G051200 Sobic003G219500--Sobic003G051200 Sobic003G219500--Sobic006G034800 Sobic007G186300 Sobic007G186300 Sobic003G007500--Sobic007G186300 Sobic010G083700 Sobic010G083700 Sobic003G007500--Sobic010G083700 Sobic010G168600 Sobic010G168600 Sobic003G007500--Sobic010G168600 Sobic001G078500 Sobic001G078500 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic001G051200 Sobic001G051200 Sobic003G007500--Sobic001G051200 Sobic003G007500--Sobic004G072800 Sobic004G104900 Sobic004G104900 Sobic003G007500--Sobic004G104900 Sobic003G007500--Sobic002G281300 Sobic004G072800--Sobic001G067900 Sobic003G350600 Sobic003G350600 Sobic004G072800--Sobic003G350600 Sobic004G072800--Sobic003G007500 Sobic002G313500 Sobic002G313500 Sobic004G072800--Sobic002G313500 Sobic004G072800--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic004G072800--Sobic001G522900 Sobic004G072800--Sobic002G281300 Sobic001G429400 Sobic001G429400 Sobic004G072800--Sobic001G429400 Sobic003G045400 Sobic003G045400 Sobic004G072800--Sobic003G045400 Sobic001G467000 Sobic001G467000 Sobic001G372000--Sobic001G467000 Sobic004G150400 Sobic004G150400 Sobic001G372000--Sobic004G150400 Sobic010G145900 Sobic010G145900 Sobic001G372000--Sobic010G145900 Sobic006G209500 Sobic006G209500 Sobic001G372000--Sobic006G209500 Sobic001G512600 Sobic001G512600 Sobic001G372000--Sobic001G512600 Sobic002G132300 Sobic002G132300 Sobic001G372000--Sobic002G132300 Sobic001G291100 Sobic001G291100 Sobic001G372000--Sobic001G291100 Sobic001G478300 Sobic001G478300 Sobic001G372000--Sobic001G478300 Sobic003G305400 Sobic003G305400 Sobic001G372000--Sobic003G305400 Sobic003G261400 Sobic003G261400 Sobic001G078800--Sobic003G261400 Sobic001G078800--Sobic010G205300 Sobic010G057900 Sobic010G057900 Sobic001G078800--Sobic010G057900 Sobic002G400000 Sobic002G400000 Sobic001G078800--Sobic002G400000 Sobic001G078800--Sobic001G085100 Sobic007G168600 Sobic007G168600 Sobic001G078800--Sobic007G168600 Sobic001G078800--Sobic001G206900 Sobic001G078800--Sobic001G051200 Sobic003G077900 Sobic003G077900 Sobic001G078800--Sobic003G077900 Sobic006G215300 Sobic006G215300 Sobic006G264500--Sobic006G215300 Sobic001G281600 Sobic001G281600 Sobic006G264500--Sobic001G281600 Sobic006G264500--Sobic002G376300 Sobic003G078800 Sobic003G078800 Sobic006G264500--Sobic003G078800 Sobic001G464100 Sobic001G464100 Sobic006G264500--Sobic001G464100 Sobic006G264500--Sobic001G372000 Sobic001G057200 Sobic001G057200 Sobic006G264500--Sobic001G057200 Sobic001G294200 Sobic001G294200 Sobic006G264500--Sobic001G294200 Sobic002G268400 Sobic002G268400 Sobic006G264500--Sobic002G268400
Octagon: transcription factors


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