Gene annotation
Transcriptome id Sobic.003G108100.1
Synonym Sb03g009090
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XFM1
Pfam PF11820
Panther DB PTHR33128 PTHR33128:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48660 : Protein of unknown function (DUF 3339)
RAP-DB (Rice) LOC_Os01g01180.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK02779
Barley HORVU3Hr1G014860.1 , HORVU3Hr1G014860.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G203200 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
2 Sobic.009G242800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
3 Sobic.001G208100 alpha-galactosidase precursor, putative, expressed K07407: E3.2.1.22B, galA, alpha-galactosidase
4 Sobic.007G217500 F-box protein At-B, putative, expressed -
5 Sobic.006G039900 - -
6 Sobic.002G164400 gibberellin receptor GID1L2, putative, expressed -
7 Sobic.002G253600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
8 Sobic.002G016900 OsFBD13 - F-box and FBD domain containing protein, expressed -
9 Sobic.006G067200 - -
10 Sobic.002G067800 - -
11 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
12 Sobic.002G253500 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
13 Sobic.002G039500 expressed protein -
14 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
15 Sobic.006G120400 no apical meristem protein, putative, expressed -
16 Sobic.002G106900 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
17 Sobic.003G204000 expressed protein -
18 Sobic.005G030300 protein kinase PKN/PRK1, effector, putative, expressed -
19 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
20 Sobic.008G073000 expressed protein -


Gene co-expression network
sample Sobic003G108100 Sobic003G108100 Sobic006G203200 Sobic006G203200 Sobic003G108100--Sobic006G203200 Sobic009G242800 Sobic009G242800 Sobic003G108100--Sobic009G242800 Sobic001G208100 Sobic001G208100 Sobic003G108100--Sobic001G208100 Sobic007G217500 Sobic007G217500 Sobic003G108100--Sobic007G217500 Sobic006G039900 Sobic006G039900 Sobic003G108100--Sobic006G039900 Sobic002G164400 Sobic002G164400 Sobic003G108100--Sobic002G164400 Sobic002G253600 Sobic002G253600 Sobic003G108100--Sobic002G253600 Sobic002G016900 Sobic002G016900 Sobic003G108100--Sobic002G016900 Sobic006G067200 Sobic006G067200 Sobic003G108100--Sobic006G067200 Sobic006G203200--Sobic002G016900 Sobic003G244700 Sobic003G244700 Sobic006G203200--Sobic003G244700 Sobic006G203200--Sobic002G253600 Sobic006G120400 Sobic006G120400 Sobic006G203200--Sobic006G120400 Sobic002G341100 Sobic002G341100 Sobic006G203200--Sobic002G341100 Sobic001G130700 Sobic001G130700 Sobic006G203200--Sobic001G130700 Sobic008G156200 Sobic008G156200 Sobic006G203200--Sobic008G156200 Sobic006G203200--Sobic009G242800 Sobic002G002500 Sobic002G002500 Sobic006G203200--Sobic002G002500 Sobic010G218100 Sobic010G218100 Sobic009G242800--Sobic010G218100 Sobic009G242800--Sobic006G120400 Sobic008G101800 Sobic008G101800 Sobic009G242800--Sobic008G101800 Sobic005G162600 Sobic005G162600 Sobic009G242800--Sobic005G162600 Sobic002G253500 Sobic002G253500 Sobic009G242800--Sobic002G253500 Sobic010G218500 Sobic010G218500 Sobic009G242800--Sobic010G218500 Sobic009G242800--Sobic006G203200 Sobic002G221900 Sobic002G221900 Sobic009G242800--Sobic002G221900 Sobic001G222300 Sobic001G222300 Sobic009G242800--Sobic001G222300 Sobic001G208100--Sobic009G242800 Sobic001G063100 Sobic001G063100 Sobic001G208100--Sobic001G063100 Sobic002G346600 Sobic002G346600 Sobic001G208100--Sobic002G346600 Sobic006G133600 Sobic006G133600 Sobic001G208100--Sobic006G133600 Sobic001G208100--Sobic003G108100 Sobic003G204000 Sobic003G204000 Sobic001G208100--Sobic003G204000 Sobic002G181450 Sobic002G181450 Sobic001G208100--Sobic002G181450 Sobic003G136800 Sobic003G136800 Sobic001G208100--Sobic003G136800 Sobic002G317800 Sobic002G317800 Sobic001G208100--Sobic002G317800 Sobic006G080300 Sobic006G080300 Sobic007G217500--Sobic006G080300 Sobic002G313300 Sobic002G313300 Sobic007G217500--Sobic002G313300 Sobic001G257300 Sobic001G257300 Sobic007G217500--Sobic001G257300 Sobic006G013500 Sobic006G013500 Sobic007G217500--Sobic006G013500 Sobic001G543900 Sobic001G543900 Sobic007G217500--Sobic001G543900 Sobic002G166500 Sobic002G166500 Sobic007G217500--Sobic002G166500 Sobic007G217500--Sobic003G204000 Sobic002G001600 Sobic002G001600 Sobic007G217500--Sobic002G001600 Sobic006G123900 Sobic006G123900 Sobic007G217500--Sobic006G123900 Sobic001G303675 Sobic001G303675 Sobic006G039900--Sobic001G303675 Sobic001G454301 Sobic001G454301 Sobic006G039900--Sobic001G454301 Sobic003G435600 Sobic003G435600 Sobic006G039900--Sobic003G435600 Sobic005G077400 Sobic005G077400 Sobic006G039900--Sobic005G077400 Sobic006G076300 Sobic006G076300 Sobic006G039900--Sobic006G076300 Sobic001G228700 Sobic001G228700 Sobic006G039900--Sobic001G228700 Sobic004G169501 Sobic004G169501 Sobic006G039900--Sobic004G169501 Sobic006G039900--Sobic001G543900 Sobic006G262200 Sobic006G262200 Sobic006G039900--Sobic006G262200 Sobic002G330400 Sobic002G330400 Sobic002G164400--Sobic002G330400 Sobic002G164400--Sobic006G123900 Sobic002G039500 Sobic002G039500 Sobic002G164400--Sobic002G039500 Sobic008G165100 Sobic008G165100 Sobic002G164400--Sobic008G165100 Sobic008G106000 Sobic008G106000 Sobic002G164400--Sobic008G106000 Sobic002G164400--Sobic002G253500 Sobic002G077200 Sobic002G077200 Sobic002G164400--Sobic002G077200 Sobic007G155900 Sobic007G155900 Sobic002G164400--Sobic007G155900 Sobic002G019600 Sobic002G019600 Sobic002G164400--Sobic002G019600 Sobic005G072400 Sobic005G072400 Sobic002G253600--Sobic005G072400 Sobic002G253600--Sobic002G016900 Sobic002G253600--Sobic003G244700 Sobic009G126800 Sobic009G126800 Sobic002G253600--Sobic009G126800 Sobic002G253600--Sobic006G203200 Sobic002G253600--Sobic008G156200 Sobic006G278200 Sobic006G278200 Sobic002G253600--Sobic006G278200 Sobic003G022200 Sobic003G022200 Sobic002G253600--Sobic003G022200 Sobic003G415100 Sobic003G415100 Sobic002G253600--Sobic003G415100 Sobic002G059866 Sobic002G059866 Sobic002G016900--Sobic002G059866 Sobic002G016900--Sobic006G203200 Sobic002G016900--Sobic002G253600 Sobic002G016900--Sobic008G156200 Sobic003G174200 Sobic003G174200 Sobic002G016900--Sobic003G174200 Sobic010G270800 Sobic010G270800 Sobic002G016900--Sobic010G270800 Sobic002G016900--Sobic003G022200 Sobic002G016900--Sobic003G244700 Sobic003G035500 Sobic003G035500 Sobic002G016900--Sobic003G035500 Sobic006G067200--Sobic001G228700 Sobic006G067200--Sobic006G039900 Sobic006G067200--Sobic008G165100 Sobic001G426900 Sobic001G426900 Sobic006G067200--Sobic001G426900 Sobic009G137900 Sobic009G137900 Sobic006G067200--Sobic009G137900 Sobic002G067800 Sobic002G067800 Sobic006G067200--Sobic002G067800 Sobic001G425000 Sobic001G425000 Sobic006G067200--Sobic001G425000 Sobic001G202266 Sobic001G202266 Sobic006G067200--Sobic001G202266 Sobic007G002900 Sobic007G002900 Sobic006G067200--Sobic007G002900
Octagon: transcription factors


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