Gene annotation
Transcriptome id Sobic.003G121800.1
Synonym Sb03g010320
Functional annotation CRAL/TRIO domain containing protein, expressed
UniProt C5XGI0
Pfam PF03765 PF00650
Panther DB PTHR10174 PTHR10174:SF113
NCBI CDD KOG1470; Phosphatidylinositol transfer protein PDR16 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G22180 : Sec14p-like phosphatidylinositol transfer family protein
RAP-DB (Rice) LOC_Os01g16000.1 : CRAL/TRIO domain containing protein, expressed
MaizeGDB (Corn) Zm00025a024034
Brachypodium -
Barley HORVU3Hr1G037050.1 , HORVU3Hr1G037050.2 , HORVU3Hr1G037050.3 , HORVU3Hr1G037050.4 , HORVU3Hr1G037050.5 , HORVU3Hr1G037050.6 , HORVU3Hr1G037050.7
Wheat TraesCS3A02G181100 , TraesCS3D02G186000 , TraesCS3D02G186000 , TraesCS3A02G181100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G332200 proteasome inhibitor-related, putative, expressed K06700: proteasome inhibitor subunit 1 (PI31)
2 Sobic.002G116500 methyltransferase, putative, expressed K00599: methyltransferase-like protein 6
3 Sobic.004G247100 peptidase, putative, expressed -
4 Sobic.002G252100 methyl-binding domain protein MBD, putative, expressed -
5 Sobic.001G434700 phosphomevalonate kinase, putative, expressed K00938: E2.7.4.2, phosphomevalonate kinase
6 Sobic.007G047600 expressed protein -
7 Sobic.001G460100 heparanase-like protein precursor, putative, expressed K07964: heparanase
8 Sobic.009G028100 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
9 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
10 Sobic.006G043700 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
11 Sobic.010G169700 pollen-specific protein SF21, putative, expressed -
12 Sobic.001G193500 DnaK family protein, putative, expressed K04043: dnaK, molecular chaperone DnaK
13 Sobic.009G045300 OsFBL21 - F-box domain and LRR containing protein, expressed K14485: transport inhibitor response 1
14 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
15 Sobic.003G037000 AGC_AGC_other_NDRh_TRCd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
16 Sobic.004G040200 CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
17 Sobic.002G003300 - K10884: XRCC6, KU70, ATP-dependent DNA helicase 2 subunit 1
18 Sobic.004G047200 T-complex protein, putative, expressed K09499: T-complex protein 1 subunit eta
19 Sobic.002G263200 expressed protein -
20 Sobic.008G191850 - -


Gene co-expression network
sample Sobic003G121800 Sobic003G121800 Sobic002G332200 Sobic002G332200 Sobic003G121800--Sobic002G332200 Sobic002G116500 Sobic002G116500 Sobic003G121800--Sobic002G116500 Sobic004G247100 Sobic004G247100 Sobic003G121800--Sobic004G247100 Sobic002G252100 Sobic002G252100 Sobic003G121800--Sobic002G252100 Sobic001G434700 Sobic001G434700 Sobic003G121800--Sobic001G434700 Sobic007G047600 Sobic007G047600 Sobic003G121800--Sobic007G047600 Sobic001G460100 Sobic001G460100 Sobic003G121800--Sobic001G460100 Sobic009G028100 Sobic009G028100 Sobic003G121800--Sobic009G028100 Sobic002G264300 Sobic002G264300 Sobic003G121800--Sobic002G264300 Sobic003G295700 Sobic003G295700 Sobic002G332200--Sobic003G295700 Sobic003G408300 Sobic003G408300 Sobic002G332200--Sobic003G408300 Sobic009G169200 Sobic009G169200 Sobic002G332200--Sobic009G169200 Sobic002G332200--Sobic002G116500 Sobic004G033200 Sobic004G033200 Sobic002G332200--Sobic004G033200 Sobic002G332200--Sobic009G028100 Sobic008G116600 Sobic008G116600 Sobic002G332200--Sobic008G116600 Sobic002G332200--Sobic003G121800 Sobic002G332200--Sobic001G460100 Sobic001G193500 Sobic001G193500 Sobic002G116500--Sobic001G193500 Sobic008G016100 Sobic008G016100 Sobic002G116500--Sobic008G016100 Sobic003G118400 Sobic003G118400 Sobic002G116500--Sobic003G118400 Sobic002G116500--Sobic004G247100 Sobic001G382200 Sobic001G382200 Sobic002G116500--Sobic001G382200 Sobic002G116500--Sobic003G408300 Sobic006G084000 Sobic006G084000 Sobic002G116500--Sobic006G084000 Sobic002G144275 Sobic002G144275 Sobic002G116500--Sobic002G144275 Sobic009G195700 Sobic009G195700 Sobic002G116500--Sobic009G195700 Sobic006G212900 Sobic006G212900 Sobic004G247100--Sobic006G212900 Sobic001G467100 Sobic001G467100 Sobic004G247100--Sobic001G467100 Sobic004G247100--Sobic009G195700 Sobic004G247100--Sobic007G047600 Sobic004G247100--Sobic002G116500 Sobic007G145400 Sobic007G145400 Sobic004G247100--Sobic007G145400 Sobic007G051400 Sobic007G051400 Sobic004G247100--Sobic007G051400 Sobic007G102500 Sobic007G102500 Sobic004G247100--Sobic007G102500 Sobic001G461300 Sobic001G461300 Sobic004G247100--Sobic001G461300 Sobic006G245900 Sobic006G245900 Sobic002G252100--Sobic006G245900 Sobic003G123100 Sobic003G123100 Sobic002G252100--Sobic003G123100 Sobic001G239800 Sobic001G239800 Sobic002G252100--Sobic001G239800 Sobic001G346900 Sobic001G346900 Sobic002G252100--Sobic001G346900 Sobic002G371600 Sobic002G371600 Sobic002G252100--Sobic002G371600 Sobic006G270600 Sobic006G270600 Sobic002G252100--Sobic006G270600 Sobic001G098400 Sobic001G098400 Sobic002G252100--Sobic001G098400 Sobic004G315500 Sobic004G315500 Sobic002G252100--Sobic004G315500 Sobic007G014800 Sobic007G014800 Sobic002G252100--Sobic007G014800 Sobic005G031000 Sobic005G031000 Sobic001G434700--Sobic005G031000 Sobic006G237000 Sobic006G237000 Sobic001G434700--Sobic006G237000 Sobic001G434700--Sobic004G247100 Sobic010G155600 Sobic010G155600 Sobic001G434700--Sobic010G155600 Sobic008G059900 Sobic008G059900 Sobic001G434700--Sobic008G059900 Sobic009G020100 Sobic009G020100 Sobic001G434700--Sobic009G020100 Sobic003G230600 Sobic003G230600 Sobic001G434700--Sobic003G230600 Sobic004G356200 Sobic004G356200 Sobic001G434700--Sobic004G356200 Sobic008G097600 Sobic008G097600 Sobic001G434700--Sobic008G097600 Sobic002G412700 Sobic002G412700 Sobic007G047600--Sobic002G412700 Sobic007G047600--Sobic007G145400 Sobic008G092800 Sobic008G092800 Sobic007G047600--Sobic008G092800 Sobic007G047600--Sobic004G356200 Sobic003G360300 Sobic003G360300 Sobic007G047600--Sobic003G360300 Sobic008G080500 Sobic008G080500 Sobic007G047600--Sobic008G080500 Sobic006G280100 Sobic006G280100 Sobic007G047600--Sobic006G280100 Sobic002G119600 Sobic002G119600 Sobic007G047600--Sobic002G119600 Sobic007G047600--Sobic001G467100 Sobic010G177100 Sobic010G177100 Sobic001G460100--Sobic010G177100 Sobic009G188900 Sobic009G188900 Sobic001G460100--Sobic009G188900 Sobic009G113900 Sobic009G113900 Sobic001G460100--Sobic009G113900 Sobic003G084200 Sobic003G084200 Sobic001G460100--Sobic003G084200 Sobic009G012600 Sobic009G012600 Sobic001G460100--Sobic009G012600 Sobic003G024000 Sobic003G024000 Sobic001G460100--Sobic003G024000 Sobic007G050800 Sobic007G050800 Sobic001G460100--Sobic007G050800 Sobic006G275500 Sobic006G275500 Sobic001G460100--Sobic006G275500 Sobic003G102700 Sobic003G102700 Sobic001G460100--Sobic003G102700 Sobic002G367200 Sobic002G367200 Sobic009G028100--Sobic002G367200 Sobic003G147500 Sobic003G147500 Sobic009G028100--Sobic003G147500 Sobic009G028100--Sobic009G012600 Sobic009G028100--Sobic001G460100 Sobic002G238500 Sobic002G238500 Sobic009G028100--Sobic002G238500 Sobic003G122800 Sobic003G122800 Sobic009G028100--Sobic003G122800 Sobic009G028100--Sobic007G050800 Sobic004G291200 Sobic004G291200 Sobic009G028100--Sobic004G291200 Sobic002G158500 Sobic002G158500 Sobic009G028100--Sobic002G158500 Sobic001G115500 Sobic001G115500 Sobic002G264300--Sobic001G115500 Sobic010G073500 Sobic010G073500 Sobic002G264300--Sobic010G073500 Sobic002G126800 Sobic002G126800 Sobic002G264300--Sobic002G126800 Sobic009G151800 Sobic009G151800 Sobic002G264300--Sobic009G151800 Sobic001G373000 Sobic001G373000 Sobic002G264300--Sobic001G373000 Sobic001G008500 Sobic001G008500 Sobic002G264300--Sobic001G008500 Sobic004G030400 Sobic004G030400 Sobic002G264300--Sobic004G030400 Sobic006G071628 Sobic006G071628 Sobic002G264300--Sobic006G071628 Sobic004G075200 Sobic004G075200 Sobic002G264300--Sobic004G075200
Octagon: transcription factors


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