Gene annotation
Transcriptome id Sobic.003G133300.1
Synonym
Functional annotation -
UniProt A0A1B6Q2X4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G217900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
2 Sobic.001G152360 - -
3 Sobic.006G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.001G033600 pentatricopeptide, putative, expressed -
5 Sobic.001G158400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@recA protein, putative, expressed K03553: recombination protein RecA
6 Sobic.008G163400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
7 Sobic.007G038250 - -
8 Sobic.010G190900 pentatricopeptide, putative, expressed -
9 Sobic.004G241000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.010G241600 RNASEH2A - Putative ribonuclease H2 large subunit, expressed K10743: ribonuclease H2 subunit A
11 Sobic.009G088575 - -
12 Sobic.003G239000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
13 Sobic.003G236100 pentatricopeptide, putative, expressed -
14 Sobic.001G466600 expressed protein -
15 Sobic.010G153000 expressed protein -
16 Sobic.001G149100 vegetative storage protein, putative, expressed -
17 Sobic.007G123100 PPR repeat domain containing protein, putative, expressed -
18 Sobic.004G002500 ribosomal protein, putative, expressed K02988: RP-S5, MRPS5, small subunit ribosomal protein S5
19 Sobic.003G235700 single-stranded DNA-binding protein, putative, expressed K03111: single-strand DNA-binding protein
20 Sobic.008G031200 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic003G133300 Sobic003G133300 Sobic004G217900 Sobic004G217900 Sobic003G133300--Sobic004G217900 Sobic001G152360 Sobic001G152360 Sobic003G133300--Sobic001G152360 Sobic006G085800 Sobic006G085800 Sobic003G133300--Sobic006G085800 Sobic001G033600 Sobic001G033600 Sobic003G133300--Sobic001G033600 Sobic001G158400 Sobic001G158400 Sobic003G133300--Sobic001G158400 Sobic008G163400 Sobic008G163400 Sobic003G133300--Sobic008G163400 Sobic007G038250 Sobic007G038250 Sobic003G133300--Sobic007G038250 Sobic010G190900 Sobic010G190900 Sobic003G133300--Sobic010G190900 Sobic004G241000 Sobic004G241000 Sobic003G133300--Sobic004G241000 Sobic009G155400 Sobic009G155400 Sobic004G217900--Sobic009G155400 Sobic004G217900--Sobic008G163400 Sobic009G116400 Sobic009G116400 Sobic004G217900--Sobic009G116400 Sobic001G187800 Sobic001G187800 Sobic004G217900--Sobic001G187800 Sobic008G099900 Sobic008G099900 Sobic004G217900--Sobic008G099900 Sobic003G051500 Sobic003G051500 Sobic004G217900--Sobic003G051500 Sobic004G217900--Sobic004G241000 Sobic004G217900--Sobic010G190900 Sobic001G149100 Sobic001G149100 Sobic004G217900--Sobic001G149100 Sobic001G466600 Sobic001G466600 Sobic001G152360--Sobic001G466600 Sobic001G152360--Sobic001G033600 Sobic010G246300 Sobic010G246300 Sobic001G152360--Sobic010G246300 Sobic009G250600 Sobic009G250600 Sobic001G152360--Sobic009G250600 Sobic010G206501 Sobic010G206501 Sobic001G152360--Sobic010G206501 Sobic010G241600 Sobic010G241600 Sobic001G152360--Sobic010G241600 Sobic001G152360--Sobic003G133300 Sobic001G252600 Sobic001G252600 Sobic001G152360--Sobic001G252600 Sobic001G180700 Sobic001G180700 Sobic001G152360--Sobic001G180700 Sobic001G436600 Sobic001G436600 Sobic006G085800--Sobic001G436600 Sobic001G478900 Sobic001G478900 Sobic006G085800--Sobic001G478900 Sobic004G256900 Sobic004G256900 Sobic006G085800--Sobic004G256900 Sobic002G172500 Sobic002G172500 Sobic006G085800--Sobic002G172500 Sobic006G085900 Sobic006G085900 Sobic006G085800--Sobic006G085900 Sobic010G068900 Sobic010G068900 Sobic006G085800--Sobic010G068900 Sobic006G085800--Sobic010G190900 Sobic006G262800 Sobic006G262800 Sobic006G085800--Sobic006G262800 Sobic006G095000 Sobic006G095000 Sobic006G085800--Sobic006G095000 Sobic001G033600--Sobic006G095000 Sobic004G030600 Sobic004G030600 Sobic001G033600--Sobic004G030600 Sobic003G396800 Sobic003G396800 Sobic001G033600--Sobic003G396800 Sobic002G182000 Sobic002G182000 Sobic001G033600--Sobic002G182000 Sobic002G192900 Sobic002G192900 Sobic001G033600--Sobic002G192900 Sobic003G359400 Sobic003G359400 Sobic001G033600--Sobic003G359400 Sobic001G033600--Sobic006G085800 Sobic001G033600--Sobic006G262800 Sobic003G184300 Sobic003G184300 Sobic001G033600--Sobic003G184300 Sobic002G235600 Sobic002G235600 Sobic001G158400--Sobic002G235600 Sobic010G099300 Sobic010G099300 Sobic001G158400--Sobic010G099300 Sobic005G022000 Sobic005G022000 Sobic001G158400--Sobic005G022000 Sobic003G136400 Sobic003G136400 Sobic001G158400--Sobic003G136400 Sobic001G158400--Sobic003G051500 Sobic003G237100 Sobic003G237100 Sobic001G158400--Sobic003G237100 Sobic001G390900 Sobic001G390900 Sobic001G158400--Sobic001G390900 Sobic001G441200 Sobic001G441200 Sobic001G158400--Sobic001G441200 Sobic001G158400--Sobic004G217900 Sobic003G239000 Sobic003G239000 Sobic008G163400--Sobic003G239000 Sobic008G163400--Sobic004G241000 Sobic008G163400--Sobic009G155400 Sobic008G163400--Sobic009G116400 Sobic008G163400--Sobic004G256900 Sobic008G163400--Sobic006G262800 Sobic001G122200 Sobic001G122200 Sobic008G163400--Sobic001G122200 Sobic002G267600 Sobic002G267600 Sobic008G163400--Sobic002G267600 Sobic008G163400--Sobic001G149100 Sobic003G216600 Sobic003G216600 Sobic007G038250--Sobic003G216600 Sobic003G397100 Sobic003G397100 Sobic007G038250--Sobic003G397100 Sobic002G173400 Sobic002G173400 Sobic007G038250--Sobic002G173400 Sobic007G038250--Sobic006G095000 Sobic009G158900 Sobic009G158900 Sobic007G038250--Sobic009G158900 Sobic001G340900 Sobic001G340900 Sobic007G038250--Sobic001G340900 Sobic001G323900 Sobic001G323900 Sobic007G038250--Sobic001G323900 Sobic007G118050 Sobic007G118050 Sobic007G038250--Sobic007G118050 Sobic003G285700 Sobic003G285700 Sobic007G038250--Sobic003G285700 Sobic010G190900--Sobic010G068900 Sobic010G190900--Sobic004G241000 Sobic006G069100 Sobic006G069100 Sobic010G190900--Sobic006G069100 Sobic010G190900--Sobic004G256900 Sobic009G253101 Sobic009G253101 Sobic010G190900--Sobic009G253101 Sobic010G190900--Sobic009G116400 Sobic010G190900--Sobic009G155400 Sobic007G087900 Sobic007G087900 Sobic010G190900--Sobic007G087900 Sobic010G190900--Sobic002G172500 Sobic004G241000--Sobic008G163400 Sobic004G241000--Sobic004G256900 Sobic004G241000--Sobic006G069100 Sobic004G241000--Sobic010G190900 Sobic004G241000--Sobic010G068900 Sobic004G241000--Sobic003G239000 Sobic004G241000--Sobic006G085900 Sobic004G241000--Sobic002G172500 Sobic004G241000--Sobic009G155400
Octagon: transcription factors


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