Gene annotation
Transcriptome id Sobic.003G135300.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6Q2Z4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g29120.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G256800 expressed protein -
2 Sobic.002G024100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
3 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
4 Sobic.001G273500 leucine-rich repeat receptor-like protein kinase 1, putative, expressed -
5 Sobic.003G341800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@exo70 exocyst complex subunit, putative, expressed -
6 Sobic.003G204501 - -
7 Sobic.004G008800 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
8 Sobic.006G002600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
9 Sobic.001G132000 fumarylacetoacetase, putative, expressed K01557: acylpyruvate hydrolase
10 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
11 Sobic.003G061400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@basic helix-loop-helix, putative, expressed -
12 Sobic.004G122800 aminotransferase domain containing protein, putative, expressed K18482: 4-amino-4-deoxychorismate lyase
13 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
14 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
15 Sobic.007G109900 bZIP transcription factor domain containing protein, expressed -
16 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
17 Sobic.009G000200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
18 Sobic.003G316300 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
19 Sobic.002G088900 DUF538 domain containing protein, putative, expressed -
20 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -


Gene co-expression network
sample Sobic003G135300 Sobic003G135300 Sobic009G256800 Sobic009G256800 Sobic003G135300--Sobic009G256800 Sobic002G024100 Sobic002G024100 Sobic003G135300--Sobic002G024100 Sobic009G167700 Sobic009G167700 Sobic003G135300--Sobic009G167700 Sobic001G273500 Sobic001G273500 Sobic003G135300--Sobic001G273500 Sobic003G341800 Sobic003G341800 Sobic003G135300--Sobic003G341800 Sobic003G204501 Sobic003G204501 Sobic003G135300--Sobic003G204501 Sobic004G008800 Sobic004G008800 Sobic003G135300--Sobic004G008800 Sobic006G002600 Sobic006G002600 Sobic003G135300--Sobic006G002600 Sobic001G132000 Sobic001G132000 Sobic003G135300--Sobic001G132000 Sobic003G149200 Sobic003G149200 Sobic009G256800--Sobic003G149200 Sobic005G215200 Sobic005G215200 Sobic009G256800--Sobic005G215200 Sobic005G216000 Sobic005G216000 Sobic009G256800--Sobic005G216000 Sobic009G256800--Sobic003G135300 Sobic009G256800--Sobic001G273500 Sobic005G139225 Sobic005G139225 Sobic009G256800--Sobic005G139225 Sobic005G231900 Sobic005G231900 Sobic009G256800--Sobic005G231900 Sobic001G386400 Sobic001G386400 Sobic009G256800--Sobic001G386400 Sobic002G085300 Sobic002G085300 Sobic009G256800--Sobic002G085300 Sobic005G152200 Sobic005G152200 Sobic002G024100--Sobic005G152200 Sobic002G024100--Sobic001G386400 Sobic003G280900 Sobic003G280900 Sobic002G024100--Sobic003G280900 Sobic006G096400 Sobic006G096400 Sobic002G024100--Sobic006G096400 Sobic002G242500 Sobic002G242500 Sobic002G024100--Sobic002G242500 Sobic003G229200 Sobic003G229200 Sobic002G024100--Sobic003G229200 Sobic010G016400 Sobic010G016400 Sobic002G024100--Sobic010G016400 Sobic002G024100--Sobic009G167700 Sobic009G172500 Sobic009G172500 Sobic002G024100--Sobic009G172500 Sobic002G244100 Sobic002G244100 Sobic009G167700--Sobic002G244100 Sobic004G341200 Sobic004G341200 Sobic009G167700--Sobic004G341200 Sobic004G102400 Sobic004G102400 Sobic009G167700--Sobic004G102400 Sobic009G167700--Sobic001G386400 Sobic009G167700--Sobic010G016400 Sobic001G089800 Sobic001G089800 Sobic009G167700--Sobic001G089800 Sobic003G354400 Sobic003G354400 Sobic009G167700--Sobic003G354400 Sobic009G167700--Sobic001G132000 Sobic006G119200 Sobic006G119200 Sobic009G167700--Sobic006G119200 Sobic003G316300 Sobic003G316300 Sobic001G273500--Sobic003G316300 Sobic009G000200 Sobic009G000200 Sobic001G273500--Sobic009G000200 Sobic009G079300 Sobic009G079300 Sobic001G273500--Sobic009G079300 Sobic006G149600 Sobic006G149600 Sobic001G273500--Sobic006G149600 Sobic003G332000 Sobic003G332000 Sobic001G273500--Sobic003G332000 Sobic001G298500 Sobic001G298500 Sobic001G273500--Sobic001G298500 Sobic007G025800 Sobic007G025800 Sobic001G273500--Sobic007G025800 Sobic004G162400 Sobic004G162400 Sobic001G273500--Sobic004G162400 Sobic009G200300 Sobic009G200300 Sobic001G273500--Sobic009G200300 Sobic003G167500 Sobic003G167500 Sobic003G341800--Sobic003G167500 Sobic004G222800 Sobic004G222800 Sobic003G341800--Sobic004G222800 Sobic009G236200 Sobic009G236200 Sobic003G341800--Sobic009G236200 Sobic002G294200 Sobic002G294200 Sobic003G341800--Sobic002G294200 Sobic001G103200 Sobic001G103200 Sobic003G341800--Sobic001G103200 Sobic004G271700 Sobic004G271700 Sobic003G341800--Sobic004G271700 Sobic009G135100 Sobic009G135100 Sobic003G341800--Sobic009G135100 Sobic001G158500 Sobic001G158500 Sobic003G341800--Sobic001G158500 Sobic010G220600 Sobic010G220600 Sobic003G341800--Sobic010G220600 Sobic003G204501--Sobic004G008800 Sobic002G013000 Sobic002G013000 Sobic003G204501--Sobic002G013000 Sobic002G088900 Sobic002G088900 Sobic003G204501--Sobic002G088900 Sobic002G089100 Sobic002G089100 Sobic003G204501--Sobic002G089100 Sobic006G246600 Sobic006G246600 Sobic003G204501--Sobic006G246600 Sobic007G109900 Sobic007G109900 Sobic003G204501--Sobic007G109900 Sobic001G316400 Sobic001G316400 Sobic003G204501--Sobic001G316400 Sobic002G122800 Sobic002G122800 Sobic003G204501--Sobic002G122800 Sobic009G114000 Sobic009G114000 Sobic003G204501--Sobic009G114000 Sobic004G008800--Sobic002G089100 Sobic004G008800--Sobic003G204501 Sobic004G008800--Sobic002G088900 Sobic004G008800--Sobic002G013000 Sobic003G111300 Sobic003G111300 Sobic004G008800--Sobic003G111300 Sobic004G008800--Sobic007G109900 Sobic004G008800--Sobic006G246600 Sobic004G008800--Sobic001G316400 Sobic004G008800--Sobic002G122800 Sobic007G125900 Sobic007G125900 Sobic006G002600--Sobic007G125900 Sobic006G002600--Sobic009G079300 Sobic006G002600--Sobic009G000200 Sobic005G016800 Sobic005G016800 Sobic006G002600--Sobic005G016800 Sobic006G002600--Sobic009G135100 Sobic006G002600--Sobic009G167700 Sobic006G002600--Sobic009G236200 Sobic006G002600--Sobic001G386400 Sobic002G172900 Sobic002G172900 Sobic006G002600--Sobic002G172900 Sobic001G132000--Sobic006G119200 Sobic001G132000--Sobic009G167700 Sobic010G210200 Sobic010G210200 Sobic001G132000--Sobic010G210200 Sobic005G024900 Sobic005G024900 Sobic001G132000--Sobic005G024900 Sobic004G101900 Sobic004G101900 Sobic001G132000--Sobic004G101900 Sobic003G061400 Sobic003G061400 Sobic001G132000--Sobic003G061400 Sobic007G219900 Sobic007G219900 Sobic001G132000--Sobic007G219900 Sobic005G079900 Sobic005G079900 Sobic001G132000--Sobic005G079900 Sobic002G304000 Sobic002G304000 Sobic001G132000--Sobic002G304000
Octagon: transcription factors


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