Gene annotation
Transcriptome id Sobic.003G198016.3,Sobic.003G198016.2,Sobic.003G198016.1
Synonym -
Functional annotation -
UniProt A0A1W0VY29 , A0A120GUT9
Pfam PF02902
Panther DB PTHR12606 PTHR12606:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT3G06910 : UB-like protease 1A
RAP-DB (Rice) LOC_Os06g13750.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G198048 - -
2 Sobic.009G156400 tubulin-specific chaperone E, putative, expressed -
3 Sobic.003G198080 - -
4 Sobic.009G103900 myb-like DNA-binding domain containing protein, putative, expressed -
5 Sobic.007G116500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
6 Sobic.004G218100 Protein octadecanal decarbonylase CER1 (Os)(PubMedID : 27208977)@WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase
7 Sobic.005G166500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@allergen-related, putative, expressed -
8 Sobic.001G538000 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
9 Sobic.002G273500 endoglucanase, putative, expressed K01179: endoglucanase
10 Sobic.001G033300 expansin precursor, putative, expressed -
11 Sobic.009G187700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.4 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
12 Sobic.008G155900 ankyrin-1, putative, expressed -
13 Sobic.010G124600 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
14 Sobic.002G007500 3-5 exonuclease domain-containing protein, putative, expressed -
15 Sobic.010G195800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamoyl-CoA reductase family (At)(PubMedID : 27208977)@reductase, putative, expressed -
16 Sobic.008G070700 leafbladeless1, putative, expressed -
17 Sobic.010G257500 expressed protein -
18 Sobic.006G211900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
19 Sobic.007G084200 expressed protein -
20 Sobic.009G146000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@galactosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic003G198016 Sobic003G198016 Sobic003G198048 Sobic003G198048 Sobic003G198016--Sobic003G198048 Sobic009G156400 Sobic009G156400 Sobic003G198016--Sobic009G156400 Sobic003G198080 Sobic003G198080 Sobic003G198016--Sobic003G198080 Sobic009G103900 Sobic009G103900 Sobic003G198016--Sobic009G103900 Sobic007G116500 Sobic007G116500 Sobic003G198016--Sobic007G116500 Sobic004G218100 Sobic004G218100 Sobic003G198016--Sobic004G218100 Sobic005G166500 Sobic005G166500 Sobic003G198016--Sobic005G166500 Sobic001G538000 Sobic001G538000 Sobic003G198016--Sobic001G538000 Sobic002G273500 Sobic002G273500 Sobic003G198016--Sobic002G273500 Sobic003G198048--Sobic003G198016 Sobic010G124600 Sobic010G124600 Sobic003G198048--Sobic010G124600 Sobic006G034200 Sobic006G034200 Sobic003G198048--Sobic006G034200 Sobic003G198048--Sobic001G538000 Sobic005G110538 Sobic005G110538 Sobic003G198048--Sobic005G110538 Sobic003G198048--Sobic009G156400 Sobic008G087300 Sobic008G087300 Sobic003G198048--Sobic008G087300 Sobic003G179700 Sobic003G179700 Sobic003G198048--Sobic003G179700 Sobic004G167000 Sobic004G167000 Sobic003G198048--Sobic004G167000 Sobic002G317700 Sobic002G317700 Sobic009G156400--Sobic002G317700 Sobic006G211900 Sobic006G211900 Sobic009G156400--Sobic006G211900 Sobic008G118100 Sobic008G118100 Sobic009G156400--Sobic008G118100 Sobic002G112000 Sobic002G112000 Sobic009G156400--Sobic002G112000 Sobic009G156400--Sobic003G198016 Sobic001G033300 Sobic001G033300 Sobic009G156400--Sobic001G033300 Sobic010G175350 Sobic010G175350 Sobic009G156400--Sobic010G175350 Sobic009G156400--Sobic003G198048 Sobic004G078500 Sobic004G078500 Sobic009G156400--Sobic004G078500 Sobic003G198080--Sobic003G198016 Sobic001G177400 Sobic001G177400 Sobic003G198080--Sobic001G177400 Sobic010G237800 Sobic010G237800 Sobic003G198080--Sobic010G237800 Sobic006G116000 Sobic006G116000 Sobic003G198080--Sobic006G116000 Sobic008G022200 Sobic008G022200 Sobic003G198080--Sobic008G022200 Sobic003G072500 Sobic003G072500 Sobic003G198080--Sobic003G072500 Sobic003G282700 Sobic003G282700 Sobic003G198080--Sobic003G282700 Sobic010G113400 Sobic010G113400 Sobic003G198080--Sobic010G113400 Sobic009G250600 Sobic009G250600 Sobic003G198080--Sobic009G250600 Sobic001G322832 Sobic001G322832 Sobic009G103900--Sobic001G322832 Sobic009G148000 Sobic009G148000 Sobic009G103900--Sobic009G148000 Sobic002G343000 Sobic002G343000 Sobic009G103900--Sobic002G343000 Sobic007G023600 Sobic007G023600 Sobic009G103900--Sobic007G023600 Sobic010G180200 Sobic010G180200 Sobic009G103900--Sobic010G180200 Sobic004G354600 Sobic004G354600 Sobic009G103900--Sobic004G354600 Sobic008G041900 Sobic008G041900 Sobic009G103900--Sobic008G041900 Sobic004G339900 Sobic004G339900 Sobic009G103900--Sobic004G339900 Sobic010G152000 Sobic010G152000 Sobic009G103900--Sobic010G152000 Sobic009G187700 Sobic009G187700 Sobic007G116500--Sobic009G187700 Sobic002G007500 Sobic002G007500 Sobic007G116500--Sobic002G007500 Sobic001G530700 Sobic001G530700 Sobic007G116500--Sobic001G530700 Sobic009G180300 Sobic009G180300 Sobic007G116500--Sobic009G180300 Sobic004G028900 Sobic004G028900 Sobic007G116500--Sobic004G028900 Sobic001G196600 Sobic001G196600 Sobic007G116500--Sobic001G196600 Sobic001G154300 Sobic001G154300 Sobic007G116500--Sobic001G154300 Sobic004G017500 Sobic004G017500 Sobic007G116500--Sobic004G017500 Sobic003G347400 Sobic003G347400 Sobic007G116500--Sobic003G347400 Sobic004G218100--Sobic009G187700 Sobic004G218100--Sobic009G180300 Sobic007G068700 Sobic007G068700 Sobic004G218100--Sobic007G068700 Sobic010G195800 Sobic010G195800 Sobic004G218100--Sobic010G195800 Sobic001G266600 Sobic001G266600 Sobic004G218100--Sobic001G266600 Sobic003G098100 Sobic003G098100 Sobic004G218100--Sobic003G098100 Sobic007G162200 Sobic007G162200 Sobic004G218100--Sobic007G162200 Sobic009G048600 Sobic009G048600 Sobic004G218100--Sobic009G048600 Sobic004G218100--Sobic002G007500 Sobic008G070700 Sobic008G070700 Sobic005G166500--Sobic008G070700 Sobic009G099150 Sobic009G099150 Sobic005G166500--Sobic009G099150 Sobic007G084200 Sobic007G084200 Sobic005G166500--Sobic007G084200 Sobic005G166500--Sobic002G317700 Sobic010G092400 Sobic010G092400 Sobic005G166500--Sobic010G092400 Sobic007G087800 Sobic007G087800 Sobic005G166500--Sobic007G087800 Sobic009G219500 Sobic009G219500 Sobic005G166500--Sobic009G219500 Sobic006G014400 Sobic006G014400 Sobic005G166500--Sobic006G014400 Sobic006G163300 Sobic006G163300 Sobic005G166500--Sobic006G163300 Sobic001G538000--Sobic010G124600 Sobic008G008200 Sobic008G008200 Sobic001G538000--Sobic008G008200 Sobic001G538000--Sobic004G167000 Sobic001G538000--Sobic008G087300 Sobic001G538000--Sobic007G068700 Sobic009G239800 Sobic009G239800 Sobic001G538000--Sobic009G239800 Sobic010G180000 Sobic010G180000 Sobic001G538000--Sobic010G180000 Sobic010G005900 Sobic010G005900 Sobic001G538000--Sobic010G005900 Sobic001G303750 Sobic001G303750 Sobic001G538000--Sobic001G303750 Sobic002G273500--Sobic009G187700 Sobic010G211100 Sobic010G211100 Sobic002G273500--Sobic010G211100 Sobic002G273500--Sobic009G180300 Sobic002G273500--Sobic006G034200 Sobic004G089400 Sobic004G089400 Sobic002G273500--Sobic004G089400 Sobic006G067300 Sobic006G067300 Sobic002G273500--Sobic006G067300 Sobic005G006701 Sobic005G006701 Sobic002G273500--Sobic005G006701 Sobic004G038850 Sobic004G038850 Sobic002G273500--Sobic004G038850 Sobic004G149200 Sobic004G149200 Sobic002G273500--Sobic004G149200
Octagon: transcription factors


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