Gene annotation
Transcriptome id Sobic.003G198080.1
Synonym -
Functional annotation -
UniProt A0A109ND54 , A0A1W0VY67
Pfam PF02902
Panther DB PTHR12606 PTHR12606:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT3G06910 : UB-like protease 1A
RAP-DB (Rice) LOC_Os02g16220.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G198016 - -
2 Sobic.001G177400 frigida, putative, expressed -
3 Sobic.010G237800 ZOS1-21 - C2H2 zinc finger protein, expressed -
4 Sobic.006G116000 Glycerophosphoryl diester phosphodiesterase family protein (Os)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
5 Sobic.008G022200 RNA-binding zinc finger protein, putative, expressed -
6 Sobic.003G072500 transcription factor X1, putative, expressed -
7 Sobic.003G282700 protein kri1, putative, expressed K14786: protein KRI1
8 Sobic.010G113400 - -
9 Sobic.009G250600 OsFBX35 - F-box domain containing protein, expressed -
10 Sobic.001G141700 acidic leucine-rich nuclear phosphoprotein 32-related protein 2, putative, expressed K18647: acidic leucine-rich nuclear phosphoprotein 32 family member B
11 Sobic.001G165500 B3 DNA binding domain containing protein, expressed -
12 Sobic.008G070700 leafbladeless1, putative, expressed -
13 Sobic.010G105050 - -
14 Sobic.005G034200 OsFBX114 - F-box domain containing protein, expressed -
15 Sobic.006G278000 protein kinase domain containing protein, expressed -
16 Sobic.003G289700 ulp1 protease family protein, putative, expressed K16287: ubiquitin-like-specific protease 1C/D
17 Sobic.003G320100 pentatricopeptide containing protein, putative, expressed -
18 Sobic.009G047000 E3 ubiquitin-protein ligase SINA-like 2, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
19 Sobic.003G349000 ruvB-like, putative, expressed K04499: RUVBL1, RVB1, RuvB-like protein 1 (pontin 52)
20 Sobic.003G423800 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81


Gene co-expression network
sample Sobic003G198080 Sobic003G198080 Sobic003G198016 Sobic003G198016 Sobic003G198080--Sobic003G198016 Sobic001G177400 Sobic001G177400 Sobic003G198080--Sobic001G177400 Sobic010G237800 Sobic010G237800 Sobic003G198080--Sobic010G237800 Sobic006G116000 Sobic006G116000 Sobic003G198080--Sobic006G116000 Sobic008G022200 Sobic008G022200 Sobic003G198080--Sobic008G022200 Sobic003G072500 Sobic003G072500 Sobic003G198080--Sobic003G072500 Sobic003G282700 Sobic003G282700 Sobic003G198080--Sobic003G282700 Sobic010G113400 Sobic010G113400 Sobic003G198080--Sobic010G113400 Sobic009G250600 Sobic009G250600 Sobic003G198080--Sobic009G250600 Sobic003G198048 Sobic003G198048 Sobic003G198016--Sobic003G198048 Sobic009G156400 Sobic009G156400 Sobic003G198016--Sobic009G156400 Sobic003G198016--Sobic003G198080 Sobic009G103900 Sobic009G103900 Sobic003G198016--Sobic009G103900 Sobic007G116500 Sobic007G116500 Sobic003G198016--Sobic007G116500 Sobic004G218100 Sobic004G218100 Sobic003G198016--Sobic004G218100 Sobic005G166500 Sobic005G166500 Sobic003G198016--Sobic005G166500 Sobic001G538000 Sobic001G538000 Sobic003G198016--Sobic001G538000 Sobic002G273500 Sobic002G273500 Sobic003G198016--Sobic002G273500 Sobic003G369700 Sobic003G369700 Sobic001G177400--Sobic003G369700 Sobic006G094000 Sobic006G094000 Sobic001G177400--Sobic006G094000 Sobic001G177400--Sobic003G198080 Sobic001G450200 Sobic001G450200 Sobic001G177400--Sobic001G450200 Sobic006G155300 Sobic006G155300 Sobic001G177400--Sobic006G155300 Sobic001G469300 Sobic001G469300 Sobic001G177400--Sobic001G469300 Sobic004G322500 Sobic004G322500 Sobic001G177400--Sobic004G322500 Sobic001G164700 Sobic001G164700 Sobic001G177400--Sobic001G164700 Sobic004G020150 Sobic004G020150 Sobic001G177400--Sobic004G020150 Sobic003G289700 Sobic003G289700 Sobic010G237800--Sobic003G289700 Sobic008G070700 Sobic008G070700 Sobic010G237800--Sobic008G070700 Sobic001G158300 Sobic001G158300 Sobic010G237800--Sobic001G158300 Sobic006G106200 Sobic006G106200 Sobic010G237800--Sobic006G106200 Sobic003G013800 Sobic003G013800 Sobic010G237800--Sobic003G013800 Sobic002G374200 Sobic002G374200 Sobic010G237800--Sobic002G374200 Sobic010G212700 Sobic010G212700 Sobic010G237800--Sobic010G212700 Sobic007G153700 Sobic007G153700 Sobic010G237800--Sobic007G153700 Sobic002G196500 Sobic002G196500 Sobic010G237800--Sobic002G196500 Sobic010G247000 Sobic010G247000 Sobic006G116000--Sobic010G247000 Sobic003G002000 Sobic003G002000 Sobic006G116000--Sobic003G002000 Sobic006G014400 Sobic006G014400 Sobic006G116000--Sobic006G014400 Sobic003G088600 Sobic003G088600 Sobic006G116000--Sobic003G088600 Sobic009G136000 Sobic009G136000 Sobic006G116000--Sobic009G136000 Sobic008G137700 Sobic008G137700 Sobic006G116000--Sobic008G137700 Sobic002G205000 Sobic002G205000 Sobic006G116000--Sobic002G205000 Sobic001G175100 Sobic001G175100 Sobic006G116000--Sobic001G175100 Sobic009G243000 Sobic009G243000 Sobic006G116000--Sobic009G243000 Sobic009G047000 Sobic009G047000 Sobic008G022200--Sobic009G047000 Sobic006G142500 Sobic006G142500 Sobic008G022200--Sobic006G142500 Sobic005G018050 Sobic005G018050 Sobic008G022200--Sobic005G018050 Sobic009G127800 Sobic009G127800 Sobic008G022200--Sobic009G127800 Sobic006G272800 Sobic006G272800 Sobic008G022200--Sobic006G272800 Sobic009G225500 Sobic009G225500 Sobic008G022200--Sobic009G225500 Sobic006G278000 Sobic006G278000 Sobic008G022200--Sobic006G278000 Sobic010G275800 Sobic010G275800 Sobic008G022200--Sobic010G275800 Sobic002G284100 Sobic002G284100 Sobic008G022200--Sobic002G284100 Sobic003G072500--Sobic008G070700 Sobic003G393100 Sobic003G393100 Sobic003G072500--Sobic003G393100 Sobic009G057800 Sobic009G057800 Sobic003G072500--Sobic009G057800 Sobic002G112000 Sobic002G112000 Sobic003G072500--Sobic002G112000 Sobic003G072500--Sobic001G175100 Sobic003G072500--Sobic006G106200 Sobic002G317700 Sobic002G317700 Sobic003G072500--Sobic002G317700 Sobic007G161600 Sobic007G161600 Sobic003G072500--Sobic007G161600 Sobic003G129500 Sobic003G129500 Sobic003G072500--Sobic003G129500 Sobic007G188200 Sobic007G188200 Sobic003G282700--Sobic007G188200 Sobic003G349000 Sobic003G349000 Sobic003G282700--Sobic003G349000 Sobic010G241600 Sobic010G241600 Sobic003G282700--Sobic010G241600 Sobic007G053700 Sobic007G053700 Sobic003G282700--Sobic007G053700 Sobic004G027700 Sobic004G027700 Sobic003G282700--Sobic004G027700 Sobic003G282700--Sobic003G072500 Sobic002G154400 Sobic002G154400 Sobic003G282700--Sobic002G154400 Sobic003G282700--Sobic001G177400 Sobic003G282700--Sobic010G237800 Sobic006G183701 Sobic006G183701 Sobic010G113400--Sobic006G183701 Sobic001G399600 Sobic001G399600 Sobic010G113400--Sobic001G399600 Sobic010G113400--Sobic003G198080 Sobic009G070250 Sobic009G070250 Sobic010G113400--Sobic009G070250 Sobic008G065932 Sobic008G065932 Sobic010G113400--Sobic008G065932 Sobic008G047200 Sobic008G047200 Sobic010G113400--Sobic008G047200 Sobic009G029900 Sobic009G029900 Sobic010G113400--Sobic009G029900 Sobic010G180200 Sobic010G180200 Sobic010G113400--Sobic010G180200 Sobic009G043400 Sobic009G043400 Sobic010G113400--Sobic009G043400 Sobic001G180700 Sobic001G180700 Sobic009G250600--Sobic001G180700 Sobic003G175050 Sobic003G175050 Sobic009G250600--Sobic003G175050 Sobic001G252600 Sobic001G252600 Sobic009G250600--Sobic001G252600 Sobic004G178550 Sobic004G178550 Sobic009G250600--Sobic004G178550 Sobic002G069300 Sobic002G069300 Sobic009G250600--Sobic002G069300 Sobic002G014100 Sobic002G014100 Sobic009G250600--Sobic002G014100 Sobic010G143666 Sobic010G143666 Sobic009G250600--Sobic010G143666 Sobic006G142925 Sobic006G142925 Sobic009G250600--Sobic006G142925 Sobic005G046600 Sobic005G046600 Sobic009G250600--Sobic005G046600
Octagon: transcription factors


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