Gene annotation
Transcriptome id Sobic.003G199400.1
Synonym ATWRKY50, WRKY50, Sb03g026170, WRKY28
Functional annotation transcription factor (PubMedID : 30367619)
WRKY77, expressed
UniProt C5XPE6
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G26170 : WRKY DNA-binding protein 50
RAP-DB (Rice) LOC_Os01g40260.1 : WRKY77, expressed
MaizeGDB (Corn) Zm00025a035789 , Zm00025a037034 , Zm00025a043010 , Zm00025a023094
Brachypodium KQK08466 , KQK07172
Barley HORVU3Hr1G020140.2 , HORVU3Hr1G020140.3 , HORVU3Hr1G020140.1 , HORVU1Hr1G027700.3 , HORVU1Hr1G027700.1 , HORVU3Hr1G050590.6 , HORVU3Hr1G050590.8 , HORVU3Hr1G050590.2 , HORVU3Hr1G050590.3 , HORVU3Hr1G050590.1 , HORVU3Hr1G050590.7 , HORVU3Hr1G050590.4
Wheat TraesCS3B02G240200 , TraesCS1A02G121500 , TraesCS3D02G212700 , TraesCS3A02G209800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G291600 - -
2 Sobic.003G049500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter family protein, putative, expressed -
3 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
4 Sobic.001G159300 OsFBX97 - F-box domain containing protein, expressed -
5 Sobic.010G172800 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.005G076500 RGH1A, putative, expressed -
7 Sobic.009G107500 - -
8 Sobic.005G096300 Up-regulated in Setosphaeria turcica resistant genotype GA06/18 by S. turcica inoculation(PubMedID : 22050783)@-(PubMedID : 25928459)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
9 Sobic.001G384500 leucine-rich repeat family protein, putative, expressed -
10 Sobic.005G222900 RGH1A, putative, expressed -
11 Sobic.009G082200 TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.001G018400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.003G386600 calreticulin precursor protein, putative, expressed K08057: calreticulin
14 Sobic.007G215700 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
16 Sobic.010G224600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR26 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
17 Sobic.006G021900 Multidrug resistence-associated protein 4(PubMedID : 26320239)@ABC transporter family protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
18 Sobic.008G002000 phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
19 Sobic.010G240400 beta-expansin precursor, putative, expressed -
20 Sobic.004G088100 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B


Gene co-expression network
sample Sobic003G199400 Sobic003G199400 Sobic001G291600 Sobic001G291600 Sobic003G199400--Sobic001G291600 Sobic003G049500 Sobic003G049500 Sobic003G199400--Sobic003G049500 Sobic008G146700 Sobic008G146700 Sobic003G199400--Sobic008G146700 Sobic001G159300 Sobic001G159300 Sobic003G199400--Sobic001G159300 Sobic010G172800 Sobic010G172800 Sobic003G199400--Sobic010G172800 Sobic005G076500 Sobic005G076500 Sobic003G199400--Sobic005G076500 Sobic009G107500 Sobic009G107500 Sobic003G199400--Sobic009G107500 Sobic005G096300 Sobic005G096300 Sobic003G199400--Sobic005G096300 Sobic001G384500 Sobic001G384500 Sobic003G199400--Sobic001G384500 Sobic009G073500 Sobic009G073500 Sobic001G291600--Sobic009G073500 Sobic005G145950 Sobic005G145950 Sobic001G291600--Sobic005G145950 Sobic001G099400 Sobic001G099400 Sobic001G291600--Sobic001G099400 Sobic002G065800 Sobic002G065800 Sobic001G291600--Sobic002G065800 Sobic010G240400 Sobic010G240400 Sobic001G291600--Sobic010G240400 Sobic001G291600--Sobic010G172800 Sobic005G126100 Sobic005G126100 Sobic001G291600--Sobic005G126100 Sobic001G291600--Sobic008G146700 Sobic001G311866 Sobic001G311866 Sobic001G291600--Sobic001G311866 Sobic002G328100 Sobic002G328100 Sobic003G049500--Sobic002G328100 Sobic001G240800 Sobic001G240800 Sobic003G049500--Sobic001G240800 Sobic007G159000 Sobic007G159000 Sobic003G049500--Sobic007G159000 Sobic002G327800 Sobic002G327800 Sobic003G049500--Sobic002G327800 Sobic004G147200 Sobic004G147200 Sobic003G049500--Sobic004G147200 Sobic004G227300 Sobic004G227300 Sobic003G049500--Sobic004G227300 Sobic002G327900 Sobic002G327900 Sobic003G049500--Sobic002G327900 Sobic008G182900 Sobic008G182900 Sobic003G049500--Sobic008G182900 Sobic009G008100 Sobic009G008100 Sobic003G049500--Sobic009G008100 Sobic005G084300 Sobic005G084300 Sobic008G146700--Sobic005G084300 Sobic004G258300 Sobic004G258300 Sobic008G146700--Sobic004G258300 Sobic005G171100 Sobic005G171100 Sobic008G146700--Sobic005G171100 Sobic008G146700--Sobic002G327900 Sobic008G146700--Sobic008G182900 Sobic008G146700--Sobic010G240400 Sobic002G327700 Sobic002G327700 Sobic008G146700--Sobic002G327700 Sobic008G146700--Sobic002G327800 Sobic008G146700--Sobic009G073500 Sobic002G120300 Sobic002G120300 Sobic001G159300--Sobic002G120300 Sobic006G010800 Sobic006G010800 Sobic001G159300--Sobic006G010800 Sobic001G258000 Sobic001G258000 Sobic001G159300--Sobic001G258000 Sobic001G163600 Sobic001G163600 Sobic001G159300--Sobic001G163600 Sobic001G159300--Sobic003G199400 Sobic010G123400 Sobic010G123400 Sobic001G159300--Sobic010G123400 Sobic008G172800 Sobic008G172800 Sobic001G159300--Sobic008G172800 Sobic008G002000 Sobic008G002000 Sobic001G159300--Sobic008G002000 Sobic009G084500 Sobic009G084500 Sobic001G159300--Sobic009G084500 Sobic010G172800--Sobic005G126100 Sobic002G065500 Sobic002G065500 Sobic010G172800--Sobic002G065500 Sobic008G182400 Sobic008G182400 Sobic010G172800--Sobic008G182400 Sobic002G065600 Sobic002G065600 Sobic010G172800--Sobic002G065600 Sobic010G231000 Sobic010G231000 Sobic010G172800--Sobic010G231000 Sobic010G172800--Sobic001G099400 Sobic010G172800--Sobic002G065800 Sobic003G035801 Sobic003G035801 Sobic010G172800--Sobic003G035801 Sobic006G117400 Sobic006G117400 Sobic010G172800--Sobic006G117400 Sobic010G015800 Sobic010G015800 Sobic005G076500--Sobic010G015800 Sobic009G033100 Sobic009G033100 Sobic005G076500--Sobic009G033100 Sobic008G099600 Sobic008G099600 Sobic005G076500--Sobic008G099600 Sobic010G019800 Sobic010G019800 Sobic005G076500--Sobic010G019800 Sobic002G303100 Sobic002G303100 Sobic005G076500--Sobic002G303100 Sobic005G096000 Sobic005G096000 Sobic005G076500--Sobic005G096000 Sobic006G201700 Sobic006G201700 Sobic005G076500--Sobic006G201700 Sobic010G122200 Sobic010G122200 Sobic005G076500--Sobic010G122200 Sobic005G076500--Sobic010G123400 Sobic010G242300 Sobic010G242300 Sobic009G107500--Sobic010G242300 Sobic002G425300 Sobic002G425300 Sobic009G107500--Sobic002G425300 Sobic009G110366 Sobic009G110366 Sobic009G107500--Sobic009G110366 Sobic004G291800 Sobic004G291800 Sobic009G107500--Sobic004G291800 Sobic009G107500--Sobic005G096300 Sobic009G197200 Sobic009G197200 Sobic009G107500--Sobic009G197200 Sobic002G171700 Sobic002G171700 Sobic009G107500--Sobic002G171700 Sobic002G226000 Sobic002G226000 Sobic009G107500--Sobic002G226000 Sobic009G198900 Sobic009G198900 Sobic009G107500--Sobic009G198900 Sobic007G035600 Sobic007G035600 Sobic005G096300--Sobic007G035600 Sobic010G280100 Sobic010G280100 Sobic005G096300--Sobic010G280100 Sobic010G111800 Sobic010G111800 Sobic005G096300--Sobic010G111800 Sobic003G154700 Sobic003G154700 Sobic005G096300--Sobic003G154700 Sobic009G232700 Sobic009G232700 Sobic005G096300--Sobic009G232700 Sobic005G096300--Sobic010G242300 Sobic004G119000 Sobic004G119000 Sobic005G096300--Sobic004G119000 Sobic004G150400 Sobic004G150400 Sobic005G096300--Sobic004G150400 Sobic001G368400 Sobic001G368400 Sobic005G096300--Sobic001G368400 Sobic001G384500--Sobic001G240800 Sobic001G004300 Sobic001G004300 Sobic001G384500--Sobic001G004300 Sobic009G082200 Sobic009G082200 Sobic001G384500--Sobic009G082200 Sobic001G384500--Sobic004G147200 Sobic008G074500 Sobic008G074500 Sobic001G384500--Sobic008G074500 Sobic004G088100 Sobic004G088100 Sobic001G384500--Sobic004G088100 Sobic006G173700 Sobic006G173700 Sobic001G384500--Sobic006G173700 Sobic007G179750 Sobic007G179750 Sobic001G384500--Sobic007G179750 Sobic008G125600 Sobic008G125600 Sobic001G384500--Sobic008G125600
Octagon: transcription factors


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