Gene annotation
Transcriptome id Sobic.003G217632.1
Synonym -
Functional annotation -
UniProt A0A1W0VYG9
Pfam PF04862
Panther DB PTHR31265 PTHR31265:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G25460 : Protein of unknown function, DUF642
RAP-DB (Rice) LOC_Os01g42520.1 : expressed protein
MaizeGDB (Corn) Zm00025a019468 , Zm00025a028693
Brachypodium KQJ83352 , KQK08682
Barley HORVU2Hr1G085520.4 , HORVU2Hr1G085520.5 , HORVU2Hr1G085520.2 , HORVU2Hr1G085520.3 , HORVU2Hr1G085340.2 , HORVU2Hr1G085340.8 , HORVU2Hr1G085340.3 , HORVU2Hr1G085340.4 , HORVU2Hr1G085340.5 , HORVU2Hr1G085340.6 , HORVU2Hr1G085340.7
Wheat TraesCS2B02G369500 , TraesCS2B02G440300 , TraesCS7D02G442500 , TraesCS2A02G351400 , TraesCS2D02G349500 , TraesCS7B02G353600 , TraesCS7B02G353600 , TraesCS7A02G453100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G052700 -(PubMedID : 23108465)@alliin lyase precursor, putative, expressed K16903: L-tryptophan---pyruvate aminotransferase
2 Sobic.002G330800 BTBN15 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
3 Sobic.008G156900 similar to Auxin-responsive protein IAA30(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf"(PubMedID : 20499123)@OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.010G126100 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
5 Sobic.003G023800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide-N4-asparagine amidase A, putative, expressed -
6 Sobic.010G207700 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
7 Sobic.001G331100 expressed protein -
8 Sobic.002G285450 - -
9 Sobic.006G157800 glycosyl transferase 8 domain containing protein, putative, expressed -
10 Sobic.005G072700 expressed protein -
11 Sobic.002G306300 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
12 Sobic.006G268200 protochlorophyllide reductase A, chloroplast precursor, putative, expressed K00218: protochlorophyllide reductase
13 Sobic.001G253900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
14 Sobic.006G118000 expressed protein -
15 Sobic.003G282600 glycosyl transferase 8 domain containing protein, putative, expressed -
16 Sobic.007G162000 carboxyl-terminal peptidase, putative, expressed -
17 Sobic.004G007800 protein kinase, putative, expressed -
18 Sobic.008G147101 - -
19 Sobic.004G016700 expressed protein -
20 Sobic.006G178800 DUF630/DUF632 domains containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G217632 Sobic003G217632 Sobic003G052700 Sobic003G052700 Sobic003G217632--Sobic003G052700 Sobic002G330800 Sobic002G330800 Sobic003G217632--Sobic002G330800 Sobic008G156900 Sobic008G156900 Sobic003G217632--Sobic008G156900 Sobic010G126100 Sobic010G126100 Sobic003G217632--Sobic010G126100 Sobic003G023800 Sobic003G023800 Sobic003G217632--Sobic003G023800 Sobic010G207700 Sobic010G207700 Sobic003G217632--Sobic010G207700 Sobic001G331100 Sobic001G331100 Sobic003G217632--Sobic001G331100 Sobic002G285450 Sobic002G285450 Sobic003G217632--Sobic002G285450 Sobic006G157800 Sobic006G157800 Sobic003G217632--Sobic006G157800 Sobic007G017400 Sobic007G017400 Sobic003G052700--Sobic007G017400 Sobic003G052700--Sobic003G023800 Sobic003G052700--Sobic003G217632 Sobic010G092100 Sobic010G092100 Sobic003G052700--Sobic010G092100 Sobic007G156101 Sobic007G156101 Sobic003G052700--Sobic007G156101 Sobic002G306300 Sobic002G306300 Sobic003G052700--Sobic002G306300 Sobic008G147101 Sobic008G147101 Sobic003G052700--Sobic008G147101 Sobic003G052700--Sobic002G330800 Sobic001G361900 Sobic001G361900 Sobic003G052700--Sobic001G361900 Sobic009G254400 Sobic009G254400 Sobic002G330800--Sobic009G254400 Sobic001G263500 Sobic001G263500 Sobic002G330800--Sobic001G263500 Sobic002G330800--Sobic001G331100 Sobic003G406500 Sobic003G406500 Sobic002G330800--Sobic003G406500 Sobic007G162000 Sobic007G162000 Sobic002G330800--Sobic007G162000 Sobic008G163800 Sobic008G163800 Sobic002G330800--Sobic008G163800 Sobic003G359200 Sobic003G359200 Sobic002G330800--Sobic003G359200 Sobic001G303000 Sobic001G303000 Sobic002G330800--Sobic001G303000 Sobic001G062700 Sobic001G062700 Sobic002G330800--Sobic001G062700 Sobic003G300100 Sobic003G300100 Sobic008G156900--Sobic003G300100 Sobic001G451800 Sobic001G451800 Sobic008G156900--Sobic001G451800 Sobic007G113900 Sobic007G113900 Sobic008G156900--Sobic007G113900 Sobic001G253900 Sobic001G253900 Sobic008G156900--Sobic001G253900 Sobic001G397700 Sobic001G397700 Sobic008G156900--Sobic001G397700 Sobic002G279300 Sobic002G279300 Sobic008G156900--Sobic002G279300 Sobic008G156900--Sobic001G331100 Sobic010G234800 Sobic010G234800 Sobic008G156900--Sobic010G234800 Sobic001G496700 Sobic001G496700 Sobic008G156900--Sobic001G496700 Sobic006G100900 Sobic006G100900 Sobic010G126100--Sobic006G100900 Sobic004G224700 Sobic004G224700 Sobic010G126100--Sobic004G224700 Sobic003G305300 Sobic003G305300 Sobic010G126100--Sobic003G305300 Sobic008G064601 Sobic008G064601 Sobic010G126100--Sobic008G064601 Sobic006G060700 Sobic006G060700 Sobic010G126100--Sobic006G060700 Sobic002G242600 Sobic002G242600 Sobic010G126100--Sobic002G242600 Sobic002G190100 Sobic002G190100 Sobic010G126100--Sobic002G190100 Sobic001G042301 Sobic001G042301 Sobic010G126100--Sobic001G042301 Sobic004G191200 Sobic004G191200 Sobic010G126100--Sobic004G191200 Sobic003G023800--Sobic003G052700 Sobic003G023800--Sobic006G060700 Sobic003G023800--Sobic003G217632 Sobic006G278800 Sobic006G278800 Sobic003G023800--Sobic006G278800 Sobic004G205500 Sobic004G205500 Sobic003G023800--Sobic004G205500 Sobic003G023800--Sobic002G306300 Sobic003G290600 Sobic003G290600 Sobic003G023800--Sobic003G290600 Sobic002G348700 Sobic002G348700 Sobic003G023800--Sobic002G348700 Sobic009G102800 Sobic009G102800 Sobic003G023800--Sobic009G102800 Sobic010G207700--Sobic006G157800 Sobic003G202300 Sobic003G202300 Sobic010G207700--Sobic003G202300 Sobic006G178800 Sobic006G178800 Sobic010G207700--Sobic006G178800 Sobic010G207700--Sobic002G285450 Sobic009G055900 Sobic009G055900 Sobic010G207700--Sobic009G055900 Sobic010G143300 Sobic010G143300 Sobic010G207700--Sobic010G143300 Sobic002G396200 Sobic002G396200 Sobic010G207700--Sobic002G396200 Sobic007G222600 Sobic007G222600 Sobic010G207700--Sobic007G222600 Sobic008G143600 Sobic008G143600 Sobic010G207700--Sobic008G143600 Sobic004G115600 Sobic004G115600 Sobic001G331100--Sobic004G115600 Sobic006G108000 Sobic006G108000 Sobic001G331100--Sobic006G108000 Sobic001G331100--Sobic002G279300 Sobic001G331100--Sobic009G254400 Sobic006G155900 Sobic006G155900 Sobic001G331100--Sobic006G155900 Sobic001G331100--Sobic008G163800 Sobic001G331100--Sobic003G406500 Sobic003G040100 Sobic003G040100 Sobic001G331100--Sobic003G040100 Sobic001G331100--Sobic001G263500 Sobic002G019900 Sobic002G019900 Sobic002G285450--Sobic002G019900 Sobic002G406400 Sobic002G406400 Sobic002G285450--Sobic002G406400 Sobic009G157000 Sobic009G157000 Sobic002G285450--Sobic009G157000 Sobic002G283800 Sobic002G283800 Sobic002G285450--Sobic002G283800 Sobic004G132400 Sobic004G132400 Sobic002G285450--Sobic004G132400 Sobic001G516800 Sobic001G516800 Sobic002G285450--Sobic001G516800 Sobic009G010900 Sobic009G010900 Sobic002G285450--Sobic009G010900 Sobic001G030200 Sobic001G030200 Sobic002G285450--Sobic001G030200 Sobic007G139000 Sobic007G139000 Sobic002G285450--Sobic007G139000 Sobic006G157800--Sobic010G207700 Sobic009G151100 Sobic009G151100 Sobic006G157800--Sobic009G151100 Sobic006G157800--Sobic002G396200 Sobic003G148400 Sobic003G148400 Sobic006G157800--Sobic003G148400 Sobic006G157800--Sobic007G222600 Sobic003G223100 Sobic003G223100 Sobic006G157800--Sobic003G223100 Sobic009G216300 Sobic009G216300 Sobic006G157800--Sobic009G216300 Sobic001G247000 Sobic001G247000 Sobic006G157800--Sobic001G247000 Sobic001G312700 Sobic001G312700 Sobic006G157800--Sobic001G312700
Octagon: transcription factors


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