Gene annotation
Transcriptome id Sobic.003G023800.1
Synonym Sb03g002270
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
peptide-N4-asparagine amidase A, putative, expressed
UniProt C5XL56
Pfam PF12222
Panther DB PTHR31104 PTHR31104:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14920 : Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
RAP-DB (Rice) LOC_Os01g10950.1 : peptide-N4-asparagine amidase A, putative, expressed
MaizeGDB (Corn) Zm00025a035881 , Zm00025a035882
Brachypodium KQK03251 , KQK03250 , KQK03248
Barley HORVU3Hr1G029260.4 , HORVU3Hr1G029260.1 , HORVU3Hr1G029260.2 , HORVU3Hr1G029260.3
Wheat TraesCS3B02G168300
Populus -


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cDNA sequences
Sobic.003G023800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G052700 -(PubMedID : 23108465)@alliin lyase precursor, putative, expressed K16903: L-tryptophan---pyruvate aminotransferase
2 Sobic.006G060700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic proline-rich protein, putative, expressed -
3 Sobic.003G217632 - -
4 Sobic.006G278800 expressed protein -
5 Sobic.004G205500 expressed protein -
6 Sobic.002G306300 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
7 Sobic.003G290600 stress-induced protein, putative, expressed -
8 Sobic.002G348700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carboxyl-terminal peptidase, putative, expressed -
9 Sobic.009G102800 MRH1, putative, expressed -
10 Sobic.007G156101 - -
11 Sobic.009G144200 glycosyl transferase, putative, expressed -
12 Sobic.004G044100 expressed protein -
13 Sobic.006G133600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
14 Sobic.008G190500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
15 Sobic.002G330800 BTBN15 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
16 Sobic.008G156900 similar to Auxin-responsive protein IAA30(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf"(PubMedID : 20499123)@OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
17 Sobic.006G004000 - -
18 Sobic.001G482300 3-ketoacyl-CoA synthase 10, putative, expressed K15397: 3-ketoacyl-CoA synthase
19 Sobic.004G354700 PCF-like (ClassI) Subclade 1 TCP(PubMedID : 21444336)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
20 Sobic.001G461200 DUF538 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G023800 Sobic003G023800 Sobic003G052700 Sobic003G052700 Sobic003G023800--Sobic003G052700 Sobic006G060700 Sobic006G060700 Sobic003G023800--Sobic006G060700 Sobic003G217632 Sobic003G217632 Sobic003G023800--Sobic003G217632 Sobic006G278800 Sobic006G278800 Sobic003G023800--Sobic006G278800 Sobic004G205500 Sobic004G205500 Sobic003G023800--Sobic004G205500 Sobic002G306300 Sobic002G306300 Sobic003G023800--Sobic002G306300 Sobic003G290600 Sobic003G290600 Sobic003G023800--Sobic003G290600 Sobic002G348700 Sobic002G348700 Sobic003G023800--Sobic002G348700 Sobic009G102800 Sobic009G102800 Sobic003G023800--Sobic009G102800 Sobic007G017400 Sobic007G017400 Sobic003G052700--Sobic007G017400 Sobic003G052700--Sobic003G023800 Sobic003G052700--Sobic003G217632 Sobic010G092100 Sobic010G092100 Sobic003G052700--Sobic010G092100 Sobic007G156101 Sobic007G156101 Sobic003G052700--Sobic007G156101 Sobic003G052700--Sobic002G306300 Sobic008G147101 Sobic008G147101 Sobic003G052700--Sobic008G147101 Sobic002G330800 Sobic002G330800 Sobic003G052700--Sobic002G330800 Sobic001G361900 Sobic001G361900 Sobic003G052700--Sobic001G361900 Sobic008G008500 Sobic008G008500 Sobic006G060700--Sobic008G008500 Sobic003G305300 Sobic003G305300 Sobic006G060700--Sobic003G305300 Sobic007G090415 Sobic007G090415 Sobic006G060700--Sobic007G090415 Sobic008G131700 Sobic008G131700 Sobic006G060700--Sobic008G131700 Sobic002G190100 Sobic002G190100 Sobic006G060700--Sobic002G190100 Sobic009G083300 Sobic009G083300 Sobic006G060700--Sobic009G083300 Sobic006G060200 Sobic006G060200 Sobic006G060700--Sobic006G060200 Sobic002G242600 Sobic002G242600 Sobic006G060700--Sobic002G242600 Sobic005G084000 Sobic005G084000 Sobic006G060700--Sobic005G084000 Sobic003G217632--Sobic003G052700 Sobic003G217632--Sobic002G330800 Sobic008G156900 Sobic008G156900 Sobic003G217632--Sobic008G156900 Sobic010G126100 Sobic010G126100 Sobic003G217632--Sobic010G126100 Sobic003G217632--Sobic003G023800 Sobic010G207700 Sobic010G207700 Sobic003G217632--Sobic010G207700 Sobic001G331100 Sobic001G331100 Sobic003G217632--Sobic001G331100 Sobic002G285450 Sobic002G285450 Sobic003G217632--Sobic002G285450 Sobic006G157800 Sobic006G157800 Sobic003G217632--Sobic006G157800 Sobic002G229800 Sobic002G229800 Sobic006G278800--Sobic002G229800 Sobic004G155900 Sobic004G155900 Sobic006G278800--Sobic004G155900 Sobic004G059100 Sobic004G059100 Sobic006G278800--Sobic004G059100 Sobic006G278800--Sobic002G306300 Sobic001G474300 Sobic001G474300 Sobic006G278800--Sobic001G474300 Sobic008G145300 Sobic008G145300 Sobic006G278800--Sobic008G145300 Sobic006G108000 Sobic006G108000 Sobic006G278800--Sobic006G108000 Sobic006G278800--Sobic002G348700 Sobic009G254400 Sobic009G254400 Sobic006G278800--Sobic009G254400 Sobic004G154600 Sobic004G154600 Sobic004G205500--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic004G205500--Sobic004G199700 Sobic003G174900 Sobic003G174900 Sobic004G205500--Sobic003G174900 Sobic003G420201 Sobic003G420201 Sobic004G205500--Sobic003G420201 Sobic007G210900 Sobic007G210900 Sobic004G205500--Sobic007G210900 Sobic002G367300 Sobic002G367300 Sobic004G205500--Sobic002G367300 Sobic004G205500--Sobic002G348700 Sobic006G248300 Sobic006G248300 Sobic004G205500--Sobic006G248300 Sobic008G086200 Sobic008G086200 Sobic004G205500--Sobic008G086200 Sobic006G247500 Sobic006G247500 Sobic002G306300--Sobic006G247500 Sobic004G297800 Sobic004G297800 Sobic002G306300--Sobic004G297800 Sobic010G189800 Sobic010G189800 Sobic002G306300--Sobic010G189800 Sobic002G285300 Sobic002G285300 Sobic002G306300--Sobic002G285300 Sobic002G306300--Sobic008G145300 Sobic004G066300 Sobic004G066300 Sobic002G306300--Sobic004G066300 Sobic007G081300 Sobic007G081300 Sobic002G306300--Sobic007G081300 Sobic004G066000 Sobic004G066000 Sobic002G306300--Sobic004G066000 Sobic002G306300--Sobic006G278800 Sobic005G117100 Sobic005G117100 Sobic003G290600--Sobic005G117100 Sobic006G073150 Sobic006G073150 Sobic003G290600--Sobic006G073150 Sobic001G267266 Sobic001G267266 Sobic003G290600--Sobic001G267266 Sobic002G045800 Sobic002G045800 Sobic003G290600--Sobic002G045800 Sobic004G296100 Sobic004G296100 Sobic003G290600--Sobic004G296100 Sobic003G029300 Sobic003G029300 Sobic003G290600--Sobic003G029300 Sobic003G023666 Sobic003G023666 Sobic003G290600--Sobic003G023666 Sobic006G053800 Sobic006G053800 Sobic003G290600--Sobic006G053800 Sobic003G290600--Sobic009G102800 Sobic002G216600 Sobic002G216600 Sobic002G348700--Sobic002G216600 Sobic002G348700--Sobic004G199700 Sobic002G348700--Sobic003G174900 Sobic002G348700--Sobic007G210900 Sobic002G348700--Sobic004G205500 Sobic003G420800 Sobic003G420800 Sobic002G348700--Sobic003G420800 Sobic009G259500 Sobic009G259500 Sobic002G348700--Sobic009G259500 Sobic006G167300 Sobic006G167300 Sobic002G348700--Sobic006G167300 Sobic009G164900 Sobic009G164900 Sobic002G348700--Sobic009G164900 Sobic009G102800--Sobic003G029300 Sobic007G154800 Sobic007G154800 Sobic009G102800--Sobic007G154800 Sobic003G176200 Sobic003G176200 Sobic009G102800--Sobic003G176200 Sobic007G123200 Sobic007G123200 Sobic009G102800--Sobic007G123200 Sobic009G064766 Sobic009G064766 Sobic009G102800--Sobic009G064766 Sobic009G102800--Sobic003G420800 Sobic004G151900 Sobic004G151900 Sobic009G102800--Sobic004G151900 Sobic001G339400 Sobic001G339400 Sobic009G102800--Sobic001G339400 Sobic008G124100 Sobic008G124100 Sobic009G102800--Sobic008G124100
Octagon: transcription factors


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