Gene annotation
Transcriptome id Sobic.003G225300.1
Synonym ABIL1, Sb03g028350
Functional annotation expressed protein
UniProt C5XR63
Pfam -
Panther DB PTHR10460 PTHR10460:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46225 : ABI-1-like 1
RAP-DB (Rice) LOC_Os01g43420.1 : expressed protein
MaizeGDB (Corn) Zm00025a036733 , Zm00025a028373
Brachypodium KQK08797 , KQK08796
Barley HORVU1Hr1G092730.6 , HORVU1Hr1G092730.7 , HORVU1Hr1G092730.4 , HORVU1Hr1G092730.2 , HORVU1Hr1G092730.3 , HORVU1Hr1G092730.1
Wheat TraesCS3B02G254600 , TraesCS1A02G424300 , TraesCS1A02G424300 , TraesCS1B02G456600 , TraesCS3D02G228600 , TraesCS1D02G433300 , TraesCS3A02G225000 , TraesCS3A02G225000
Populus -


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cDNA sequences
Sobic.003G225300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G275100 green ripe-like, putative, expressed -
2 Sobic.009G011700 protein kinase APK1A, chloroplast precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
3 Sobic.009G215400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
5 Sobic.009G171700 SAG20, putative, expressed -
6 Sobic.006G240500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
7 Sobic.004G079100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
8 Sobic.003G380000 expressed protein -
9 Sobic.004G058500 cell cycle control protein, putative, expressed -
10 Sobic.004G308400 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
11 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
12 Sobic.002G291300 hydrolase, NUDIX family protein, expressed K18453: ADP-ribose/FAD diphosphatase
13 Sobic.008G097100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.010G253800 expressed protein -
15 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
16 Sobic.004G027900 - -
17 Sobic.001G335400 protein of unknown function DUF1675 domain containing protein, expressed -
18 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
19 Sobic.008G180900 YIF1B, putative, expressed -
20 Sobic.009G160000 basic helix-loop-helix DND-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic003G225300 Sobic003G225300 Sobic003G275100 Sobic003G275100 Sobic003G225300--Sobic003G275100 Sobic009G011700 Sobic009G011700 Sobic003G225300--Sobic009G011700 Sobic009G215400 Sobic009G215400 Sobic003G225300--Sobic009G215400 Sobic004G293700 Sobic004G293700 Sobic003G225300--Sobic004G293700 Sobic009G171700 Sobic009G171700 Sobic003G225300--Sobic009G171700 Sobic006G240500 Sobic006G240500 Sobic003G225300--Sobic006G240500 Sobic004G079100 Sobic004G079100 Sobic003G225300--Sobic004G079100 Sobic003G380000 Sobic003G380000 Sobic003G225300--Sobic003G380000 Sobic004G058500 Sobic004G058500 Sobic003G225300--Sobic004G058500 Sobic010G186200 Sobic010G186200 Sobic003G275100--Sobic010G186200 Sobic003G275100--Sobic004G293700 Sobic003G253000 Sobic003G253000 Sobic003G275100--Sobic003G253000 Sobic002G264400 Sobic002G264400 Sobic003G275100--Sobic002G264400 Sobic001G124600 Sobic001G124600 Sobic003G275100--Sobic001G124600 Sobic002G202300 Sobic002G202300 Sobic003G275100--Sobic002G202300 Sobic002G180600 Sobic002G180600 Sobic003G275100--Sobic002G180600 Sobic010G243200 Sobic010G243200 Sobic003G275100--Sobic010G243200 Sobic003G220600 Sobic003G220600 Sobic003G275100--Sobic003G220600 Sobic001G478300 Sobic001G478300 Sobic009G011700--Sobic001G478300 Sobic008G180900 Sobic008G180900 Sobic009G011700--Sobic008G180900 Sobic001G076000 Sobic001G076000 Sobic009G011700--Sobic001G076000 Sobic001G427800 Sobic001G427800 Sobic009G011700--Sobic001G427800 Sobic004G231400 Sobic004G231400 Sobic009G011700--Sobic004G231400 Sobic004G049100 Sobic004G049100 Sobic009G011700--Sobic004G049100 Sobic001G371300 Sobic001G371300 Sobic009G011700--Sobic001G371300 Sobic009G237600 Sobic009G237600 Sobic009G011700--Sobic009G237600 Sobic010G071200 Sobic010G071200 Sobic009G011700--Sobic010G071200 Sobic003G323800 Sobic003G323800 Sobic009G215400--Sobic003G323800 Sobic002G042100 Sobic002G042100 Sobic009G215400--Sobic002G042100 Sobic004G243000 Sobic004G243000 Sobic009G215400--Sobic004G243000 Sobic003G303100 Sobic003G303100 Sobic009G215400--Sobic003G303100 Sobic003G250600 Sobic003G250600 Sobic009G215400--Sobic003G250600 Sobic001G279500 Sobic001G279500 Sobic009G215400--Sobic001G279500 Sobic002G235500 Sobic002G235500 Sobic009G215400--Sobic002G235500 Sobic001G299500 Sobic001G299500 Sobic009G215400--Sobic001G299500 Sobic006G162100 Sobic006G162100 Sobic009G215400--Sobic006G162100 Sobic010G253800 Sobic010G253800 Sobic004G293700--Sobic010G253800 Sobic004G293700--Sobic004G079100 Sobic010G083700 Sobic010G083700 Sobic004G293700--Sobic010G083700 Sobic001G054200 Sobic001G054200 Sobic004G293700--Sobic001G054200 Sobic004G248800 Sobic004G248800 Sobic004G293700--Sobic004G248800 Sobic004G293700--Sobic009G171700 Sobic004G293700--Sobic002G264400 Sobic006G141500 Sobic006G141500 Sobic004G293700--Sobic006G141500 Sobic004G293700--Sobic003G220600 Sobic001G078500 Sobic001G078500 Sobic009G171700--Sobic001G078500 Sobic010G168600 Sobic010G168600 Sobic009G171700--Sobic010G168600 Sobic009G246950 Sobic009G246950 Sobic009G171700--Sobic009G246950 Sobic009G171700--Sobic004G293700 Sobic009G171700--Sobic010G083700 Sobic009G171700--Sobic010G253800 Sobic009G171700--Sobic008G180900 Sobic007G186300 Sobic007G186300 Sobic009G171700--Sobic007G186300 Sobic002G256300 Sobic002G256300 Sobic009G171700--Sobic002G256300 Sobic007G177100 Sobic007G177100 Sobic006G240500--Sobic007G177100 Sobic004G212900 Sobic004G212900 Sobic006G240500--Sobic004G212900 Sobic001G483400 Sobic001G483400 Sobic006G240500--Sobic001G483400 Sobic002G245800 Sobic002G245800 Sobic006G240500--Sobic002G245800 Sobic007G126100 Sobic007G126100 Sobic006G240500--Sobic007G126100 Sobic002G174200 Sobic002G174200 Sobic006G240500--Sobic002G174200 Sobic007G212200 Sobic007G212200 Sobic006G240500--Sobic007G212200 Sobic004G166400 Sobic004G166400 Sobic006G240500--Sobic004G166400 Sobic002G421600 Sobic002G421600 Sobic006G240500--Sobic002G421600 Sobic004G079100--Sobic004G293700 Sobic001G138300 Sobic001G138300 Sobic004G079100--Sobic001G138300 Sobic004G079100--Sobic001G054200 Sobic004G079100--Sobic010G083700 Sobic003G115800 Sobic003G115800 Sobic004G079100--Sobic003G115800 Sobic004G079100--Sobic007G186300 Sobic004G079100--Sobic009G246950 Sobic004G079100--Sobic009G171700 Sobic004G079100--Sobic001G371300 Sobic010G232100 Sobic010G232100 Sobic003G380000--Sobic010G232100 Sobic005G228000 Sobic005G228000 Sobic003G380000--Sobic005G228000 Sobic002G345300 Sobic002G345300 Sobic003G380000--Sobic002G345300 Sobic010G178200 Sobic010G178200 Sobic003G380000--Sobic010G178200 Sobic003G285800 Sobic003G285800 Sobic003G380000--Sobic003G285800 Sobic010G135000 Sobic010G135000 Sobic003G380000--Sobic010G135000 Sobic009G046600 Sobic009G046600 Sobic003G380000--Sobic009G046600 Sobic004G157000 Sobic004G157000 Sobic003G380000--Sobic004G157000 Sobic002G046100 Sobic002G046100 Sobic003G380000--Sobic002G046100 Sobic009G177800 Sobic009G177800 Sobic004G058500--Sobic009G177800 Sobic009G155200 Sobic009G155200 Sobic004G058500--Sobic009G155200 Sobic010G224200 Sobic010G224200 Sobic004G058500--Sobic010G224200 Sobic002G423300 Sobic002G423300 Sobic004G058500--Sobic002G423300 Sobic004G050000 Sobic004G050000 Sobic004G058500--Sobic004G050000 Sobic003G192100 Sobic003G192100 Sobic004G058500--Sobic003G192100 Sobic002G183200 Sobic002G183200 Sobic004G058500--Sobic002G183200 Sobic008G111100 Sobic008G111100 Sobic004G058500--Sobic008G111100 Sobic004G307000 Sobic004G307000 Sobic004G058500--Sobic004G307000
Octagon: transcription factors


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