Gene annotation
Transcriptome id Sobic.006G240500.1
Synonym ethylene response factor 74, Sb06g030660, DEAR3, SbERF74
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt A0A1B6PNK7
Pfam PF00847
Panther DB PTHR31729 PTHR31729:SF1
NCBI CDD -
KEGG Orthology K09286; EREBP-like factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G23340 : DREB and EAR motif protein 3
RAP-DB (Rice) LOC_Os04g55520.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a057202 , Zm00025a009545 , Zm00025a049905 , Zm00025a044642 , Zm00025a041622
Brachypodium KQK19450 , PNT62013
Barley HORVU2Hr1G113940.2 , HORVU2Hr1G113940.1 , HORVU2Hr1G113940.4 , HORVU2Hr1G113940.3
Wheat TraesCS2D02G511600 , TraesCS2D02G511600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.004G212900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
3 Sobic.001G483400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
4 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
5 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
6 Sobic.002G174200 WRKY74, expressed -
7 Sobic.007G212200 AN1-like zinc finger domain containing protein, expressed -
8 Sobic.004G166400 expressed protein -
9 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
10 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
11 Sobic.002G354900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@gibberellin response modulator protein, putative, expressed -
12 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.006G044932 - -
14 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
15 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
16 Sobic.001G422900 zinc finger family protein, putative, expressed -
17 Sobic.006G157500 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
18 Sobic.002G333300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase receptor precursor, putative, expressed -
19 Sobic.001G223100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
20 Sobic.006G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -


Gene co-expression network
sample Sobic006G240500 Sobic006G240500 Sobic007G177100 Sobic007G177100 Sobic006G240500--Sobic007G177100 Sobic004G212900 Sobic004G212900 Sobic006G240500--Sobic004G212900 Sobic001G483400 Sobic001G483400 Sobic006G240500--Sobic001G483400 Sobic002G245800 Sobic002G245800 Sobic006G240500--Sobic002G245800 Sobic007G126100 Sobic007G126100 Sobic006G240500--Sobic007G126100 Sobic002G174200 Sobic002G174200 Sobic006G240500--Sobic002G174200 Sobic007G212200 Sobic007G212200 Sobic006G240500--Sobic007G212200 Sobic004G166400 Sobic004G166400 Sobic006G240500--Sobic004G166400 Sobic002G421600 Sobic002G421600 Sobic006G240500--Sobic002G421600 Sobic009G159200 Sobic009G159200 Sobic007G177100--Sobic009G159200 Sobic007G177100--Sobic007G126100 Sobic007G177100--Sobic004G212900 Sobic006G157500 Sobic006G157500 Sobic007G177100--Sobic006G157500 Sobic007G177100--Sobic004G166400 Sobic010G030401 Sobic010G030401 Sobic007G177100--Sobic010G030401 Sobic002G254200 Sobic002G254200 Sobic007G177100--Sobic002G254200 Sobic007G197600 Sobic007G197600 Sobic007G177100--Sobic007G197600 Sobic003G360000 Sobic003G360000 Sobic007G177100--Sobic003G360000 Sobic004G212900--Sobic006G157500 Sobic004G212900--Sobic007G177100 Sobic003G382800 Sobic003G382800 Sobic004G212900--Sobic003G382800 Sobic010G274900 Sobic010G274900 Sobic004G212900--Sobic010G274900 Sobic002G335300 Sobic002G335300 Sobic004G212900--Sobic002G335300 Sobic009G074100 Sobic009G074100 Sobic004G212900--Sobic009G074100 Sobic001G477600 Sobic001G477600 Sobic004G212900--Sobic001G477600 Sobic002G291900 Sobic002G291900 Sobic004G212900--Sobic002G291900 Sobic003G357300 Sobic003G357300 Sobic004G212900--Sobic003G357300 Sobic005G010200 Sobic005G010200 Sobic001G483400--Sobic005G010200 Sobic010G220200 Sobic010G220200 Sobic001G483400--Sobic010G220200 Sobic009G129000 Sobic009G129000 Sobic001G483400--Sobic009G129000 Sobic001G483400--Sobic002G174200 Sobic004G065500 Sobic004G065500 Sobic001G483400--Sobic004G065500 Sobic006G230900 Sobic006G230900 Sobic001G483400--Sobic006G230900 Sobic006G190500 Sobic006G190500 Sobic001G483400--Sobic006G190500 Sobic010G217800 Sobic010G217800 Sobic001G483400--Sobic010G217800 Sobic002G082600 Sobic002G082600 Sobic001G483400--Sobic002G082600 Sobic002G405600 Sobic002G405600 Sobic002G245800--Sobic002G405600 Sobic001G040200 Sobic001G040200 Sobic002G245800--Sobic001G040200 Sobic003G324400 Sobic003G324400 Sobic002G245800--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G245800--Sobic009G247900 Sobic001G422900 Sobic001G422900 Sobic002G245800--Sobic001G422900 Sobic009G023200 Sobic009G023200 Sobic002G245800--Sobic009G023200 Sobic001G095300 Sobic001G095300 Sobic002G245800--Sobic001G095300 Sobic002G140300 Sobic002G140300 Sobic002G245800--Sobic002G140300 Sobic006G179500 Sobic006G179500 Sobic002G245800--Sobic006G179500 Sobic007G126100--Sobic007G177100 Sobic007G126100--Sobic004G212900 Sobic007G126100--Sobic002G421600 Sobic007G126100--Sobic002G254200 Sobic009G016201 Sobic009G016201 Sobic007G126100--Sobic009G016201 Sobic007G126100--Sobic009G159200 Sobic004G172700 Sobic004G172700 Sobic007G126100--Sobic004G172700 Sobic007G126100--Sobic006G157500 Sobic002G282400 Sobic002G282400 Sobic007G126100--Sobic002G282400 Sobic001G259600 Sobic001G259600 Sobic002G174200--Sobic001G259600 Sobic009G036000 Sobic009G036000 Sobic002G174200--Sobic009G036000 Sobic002G174200--Sobic001G483400 Sobic001G259700 Sobic001G259700 Sobic002G174200--Sobic001G259700 Sobic007G213800 Sobic007G213800 Sobic002G174200--Sobic007G213800 Sobic006G190100 Sobic006G190100 Sobic002G174200--Sobic006G190100 Sobic002G174200--Sobic002G405600 Sobic002G174200--Sobic002G291900 Sobic003G313800 Sobic003G313800 Sobic002G174200--Sobic003G313800 Sobic002G354900 Sobic002G354900 Sobic007G212200--Sobic002G354900 Sobic007G011000 Sobic007G011000 Sobic007G212200--Sobic007G011000 Sobic009G204100 Sobic009G204100 Sobic007G212200--Sobic009G204100 Sobic002G118600 Sobic002G118600 Sobic007G212200--Sobic002G118600 Sobic007G212200--Sobic002G245800 Sobic001G410100 Sobic001G410100 Sobic007G212200--Sobic001G410100 Sobic003G361100 Sobic003G361100 Sobic007G212200--Sobic003G361100 Sobic006G089300 Sobic006G089300 Sobic007G212200--Sobic006G089300 Sobic003G353800 Sobic003G353800 Sobic007G212200--Sobic003G353800 Sobic004G166400--Sobic007G177100 Sobic009G075900 Sobic009G075900 Sobic004G166400--Sobic009G075900 Sobic004G166400--Sobic009G159200 Sobic002G314700 Sobic002G314700 Sobic004G166400--Sobic002G314700 Sobic010G166500 Sobic010G166500 Sobic004G166400--Sobic010G166500 Sobic003G334600 Sobic003G334600 Sobic004G166400--Sobic003G334600 Sobic004G166400--Sobic002G254200 Sobic009G221400 Sobic009G221400 Sobic004G166400--Sobic009G221400 Sobic003G297600 Sobic003G297600 Sobic004G166400--Sobic003G297600 Sobic002G421600--Sobic007G126100 Sobic006G269200 Sobic006G269200 Sobic002G421600--Sobic006G269200 Sobic002G421600--Sobic007G177100 Sobic002G421600--Sobic002G254200 Sobic003G034400 Sobic003G034400 Sobic002G421600--Sobic003G034400 Sobic003G293900 Sobic003G293900 Sobic002G421600--Sobic003G293900 Sobic001G225200 Sobic001G225200 Sobic002G421600--Sobic001G225200 Sobic006G047000 Sobic006G047000 Sobic002G421600--Sobic006G047000 Sobic006G241600 Sobic006G241600 Sobic002G421600--Sobic006G241600
Octagon: transcription factors


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