Gene annotation
Transcriptome id Sobic.003G252500.1,Sobic.003G252500.2
Synonym GSL5, GSL05, PMR4, ATGSL5, ATGSL05
Functional annotation 1,3-beta-glucan synthase component, putative, expressed
UniProt A0A1B6Q586
Pfam PF14288 PF02364
Panther DB PTHR12741 PTHR12741:SF14
NCBI CDD -
KEGG Orthology K11000; callose synthase
Gene Ontology GO:0016020; membrane GO:0006075(1->3)-beta-D-glucan biosynthetic process GO:00038431,3-beta-D-glucan synthase activity GO:00001481,3-beta-D-glucan synthase complex


Orthologs (automatic annotation)
TAIR AT4G03550 : glucan synthase-like 5
RAP-DB (Rice) LOC_Os01g55040.1 : 1,3-beta-glucan synthase component, putative, expressed
MaizeGDB (Corn) Zm00025a028089 , Zm00025a004058 , Zm00025a027538
Brachypodium PNT72560 , KQK09789
Barley HORVU5Hr1G062460.1 , HORVU4Hr1G085510.24 , HORVU4Hr1G085510.9 , HORVU4Hr1G085510.3 , HORVU4Hr1G085510.2 , HORVU4Hr1G085510.1 , HORVU4Hr1G085510.7 , HORVU4Hr1G085510.5 , HORVU4Hr1G085510.4 , HORVU3Hr1G072540.1 , HORVU3Hr1G072540.3 , HORVU3Hr1G072540.2 , HORVU3Hr1G072540.5 , HORVU3Hr1G072540.4 , HORVU3Hr1G072540.6 , HORVU2Hr1G109970.1 , HORVU2Hr1G109970.2 , HORVU2Hr1G109970.3 , HORVU4Hr1G085510.39 , HORVU4Hr1G085510.38 , HORVU4Hr1G085510.35 , HORVU4Hr1G085510.34 , HORVU4Hr1G085510.37 , HORVU4Hr1G085510.36 , HORVU4Hr1G085510.33 , HORVU4Hr1G085510.32 , HORVU4Hr1G063770.1 , HORVU3Hr1G061700.3 , HORVU3Hr1G061700.2 , HORVU3Hr1G061700.1 , HORVU3Hr1G061700.4 , HORVU4Hr1G085510.23 , HORVU4Hr1G085510.20 , HORVU4Hr1G085510.21 , HORVU4Hr1G085510.26 , HORVU4Hr1G085510.25 , HORVU4Hr1G085510.29 , HORVU4Hr1G085510.19 , HORVU4Hr1G085510.18 , HORVU4Hr1G085510.13 , HORVU4Hr1G085510.12 , HORVU4Hr1G085510.11 , HORVU4Hr1G085510.10 , HORVU4Hr1G085510.16 , HORVU4Hr1G085510.15
Wheat TraesCS3D02G246000 , TraesCS3B02G274100 , TraesCS4D02G346600 , TraesCS2A02G493100 , TraesCS5A02G520600 , TraesCS5A02G520600 , TraesCS5A02G520600 , TraesCS3A02G245500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G353600 sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@transporter, major facilitator family, putative, expressed K15378: solute carrier family 45, member 1/2/4
2 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
3 Sobic.004G337900 ENTH domain containing protein, expressed K12471: epsin
4 Sobic.003G361300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
5 Sobic.001G450800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
6 Sobic.006G207900 DNA binding protein, putative, expressed -
7 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
8 Sobic.003G353400 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
9 Sobic.003G336100 auxin efflux carrier component, putative, expressed -
10 Sobic.002G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed -
11 Sobic.003G327600 domain of unknown function, DUF250 domain containing protein, expressed -
12 Sobic.006G078300 - -
13 Sobic.002G239900 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
14 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
15 Sobic.010G272101 - -
16 Sobic.002G270800 amino acid transporter, putative, expressed -
17 Sobic.003G237800 hydrolase, alpha/beta fold family domain containing protein, expressed -
18 Sobic.004G337500 GATA zinc finger domain containing protein, expressed -
19 Sobic.001G430700 expressed protein -
20 Sobic.003G272400 DUF292 domain containing protein, expressed -


Gene co-expression network
sample Sobic003G252500 Sobic003G252500 Sobic004G353600 Sobic004G353600 Sobic003G252500--Sobic004G353600 Sobic001G157400 Sobic001G157400 Sobic003G252500--Sobic001G157400 Sobic004G337900 Sobic004G337900 Sobic003G252500--Sobic004G337900 Sobic003G361300 Sobic003G361300 Sobic003G252500--Sobic003G361300 Sobic001G450800 Sobic001G450800 Sobic003G252500--Sobic001G450800 Sobic006G207900 Sobic006G207900 Sobic003G252500--Sobic006G207900 Sobic004G207900 Sobic004G207900 Sobic003G252500--Sobic004G207900 Sobic003G353400 Sobic003G353400 Sobic003G252500--Sobic003G353400 Sobic003G336100 Sobic003G336100 Sobic003G252500--Sobic003G336100 Sobic003G272400 Sobic003G272400 Sobic004G353600--Sobic003G272400 Sobic002G306000 Sobic002G306000 Sobic004G353600--Sobic002G306000 Sobic006G078300 Sobic006G078300 Sobic004G353600--Sobic006G078300 Sobic003G087100 Sobic003G087100 Sobic004G353600--Sobic003G087100 Sobic003G378000 Sobic003G378000 Sobic004G353600--Sobic003G378000 Sobic004G353600--Sobic001G157400 Sobic003G332000 Sobic003G332000 Sobic004G353600--Sobic003G332000 Sobic001G075800 Sobic001G075800 Sobic004G353600--Sobic001G075800 Sobic006G203000 Sobic006G203000 Sobic004G353600--Sobic006G203000 Sobic001G050800 Sobic001G050800 Sobic001G157400--Sobic001G050800 Sobic002G023900 Sobic002G023900 Sobic001G157400--Sobic002G023900 Sobic006G026400 Sobic006G026400 Sobic001G157400--Sobic006G026400 Sobic002G068800 Sobic002G068800 Sobic001G157400--Sobic002G068800 Sobic003G278700 Sobic003G278700 Sobic001G157400--Sobic003G278700 Sobic003G227600 Sobic003G227600 Sobic001G157400--Sobic003G227600 Sobic006G032200 Sobic006G032200 Sobic001G157400--Sobic006G032200 Sobic001G157400--Sobic006G078300 Sobic009G170100 Sobic009G170100 Sobic001G157400--Sobic009G170100 Sobic004G337900--Sobic003G353400 Sobic004G337900--Sobic001G450800 Sobic004G337900--Sobic003G361300 Sobic004G337900--Sobic003G278700 Sobic003G198200 Sobic003G198200 Sobic004G337900--Sobic003G198200 Sobic003G198150 Sobic003G198150 Sobic004G337900--Sobic003G198150 Sobic004G337900--Sobic001G157400 Sobic009G229300 Sobic009G229300 Sobic004G337900--Sobic009G229300 Sobic009G099000 Sobic009G099000 Sobic004G337900--Sobic009G099000 Sobic003G361300--Sobic001G450800 Sobic001G430700 Sobic001G430700 Sobic003G361300--Sobic001G430700 Sobic003G361300--Sobic003G198150 Sobic008G044750 Sobic008G044750 Sobic003G361300--Sobic008G044750 Sobic003G361300--Sobic003G227600 Sobic003G040800 Sobic003G040800 Sobic003G361300--Sobic003G040800 Sobic009G216900 Sobic009G216900 Sobic003G361300--Sobic009G216900 Sobic003G233900 Sobic003G233900 Sobic003G361300--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic003G361300--Sobic009G128300 Sobic001G450800--Sobic003G361300 Sobic001G450800--Sobic001G430700 Sobic001G450800--Sobic003G198150 Sobic001G106000 Sobic001G106000 Sobic001G450800--Sobic001G106000 Sobic001G450800--Sobic003G040800 Sobic001G450800--Sobic003G227600 Sobic001G450800--Sobic008G044750 Sobic001G450800--Sobic009G216900 Sobic004G285100 Sobic004G285100 Sobic001G450800--Sobic004G285100 Sobic006G217300 Sobic006G217300 Sobic006G207900--Sobic006G217300 Sobic009G169400 Sobic009G169400 Sobic006G207900--Sobic009G169400 Sobic006G207900--Sobic003G272400 Sobic003G043800 Sobic003G043800 Sobic006G207900--Sobic003G043800 Sobic003G126300 Sobic003G126300 Sobic006G207900--Sobic003G126300 Sobic001G312500 Sobic001G312500 Sobic006G207900--Sobic001G312500 Sobic006G207900--Sobic004G207900 Sobic001G122500 Sobic001G122500 Sobic006G207900--Sobic001G122500 Sobic004G124500 Sobic004G124500 Sobic006G207900--Sobic004G124500 Sobic001G161700 Sobic001G161700 Sobic004G207900--Sobic001G161700 Sobic009G077600 Sobic009G077600 Sobic004G207900--Sobic009G077600 Sobic004G100200 Sobic004G100200 Sobic004G207900--Sobic004G100200 Sobic001G023100 Sobic001G023100 Sobic004G207900--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic004G207900--Sobic003G346400 Sobic004G025300 Sobic004G025300 Sobic004G207900--Sobic004G025300 Sobic002G141700 Sobic002G141700 Sobic004G207900--Sobic002G141700 Sobic008G129600 Sobic008G129600 Sobic004G207900--Sobic008G129600 Sobic002G294100 Sobic002G294100 Sobic004G207900--Sobic002G294100 Sobic003G353400--Sobic004G337900 Sobic001G099100 Sobic001G099100 Sobic003G353400--Sobic001G099100 Sobic007G225300 Sobic007G225300 Sobic003G353400--Sobic007G225300 Sobic006G242100 Sobic006G242100 Sobic003G353400--Sobic006G242100 Sobic009G030200 Sobic009G030200 Sobic003G353400--Sobic009G030200 Sobic007G178200 Sobic007G178200 Sobic003G353400--Sobic007G178200 Sobic003G319000 Sobic003G319000 Sobic003G353400--Sobic003G319000 Sobic010G050900 Sobic010G050900 Sobic003G353400--Sobic010G050900 Sobic003G312400 Sobic003G312400 Sobic003G353400--Sobic003G312400 Sobic007G196900 Sobic007G196900 Sobic003G336100--Sobic007G196900 Sobic003G336100--Sobic003G198200 Sobic003G336100--Sobic004G124500 Sobic003G336100--Sobic003G272400 Sobic005G121200 Sobic005G121200 Sobic003G336100--Sobic005G121200 Sobic003G336100--Sobic006G207900 Sobic003G336100--Sobic003G198150 Sobic003G229000 Sobic003G229000 Sobic003G336100--Sobic003G229000 Sobic010G165300 Sobic010G165300 Sobic003G336100--Sobic010G165300
Octagon: transcription factors


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