Gene annotation
Transcriptome id Sobic.003G272200.1
Synonym Sb03g032420
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt C5XHM5
Pfam PF00010 PF14215
Panther DB PTHR11514 PTHR11514:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46510 : ABA-inducible BHLH-type transcription factor
RAP-DB (Rice) LOC_Os01g50940.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047661 , Zm00025a027847 , Zm00025a051819 , Zm00025a003465
Brachypodium KQK09396
Barley HORVU3Hr1G066390.1 , HORVU1Hr1G050560.1 , HORVU1Hr1G050560.2
Wheat TraesCS1A02G193200 , TraesCS3D02G253700 , TraesCS3B02G288700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G181900 expressed protein -
2 Sobic.009G169900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
3 Sobic.003G393400 exo70 exocyst complex subunit domain containing protein, expressed -
4 Sobic.004G181400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed K16286: E3 ubiquitin-protein ligase EL5
5 Sobic.007G049300 OsFBX381 - F-box domain containing protein, expressed -
6 Sobic.004G227400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
7 Sobic.007G049700 - -
8 Sobic.009G025800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@tetraspanin family protein, putative, expressed -
9 Sobic.001G476100 expressed protein -
10 Sobic.001G071300 expressed protein -
11 Sobic.002G330600 eukaryotic translation initiation factor-related, putative, expressed -
12 Sobic.007G077300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.002G182900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G185000 agenet domain containing protein, expressed -
15 Sobic.001G237300 wheat copper-binding protein(PubMedID : 26444258)@heavy-metal-associated domain-containing protein, putative, expressed -
16 Sobic.003G334500 - -
17 Sobic.010G163150 - -
18 Sobic.002G371800 DC1 domain-containing protein, putative, expressed -
19 Sobic.006G050550 - -
20 Sobic.007G125100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G272200 Sobic003G272200 Sobic007G181900 Sobic007G181900 Sobic003G272200--Sobic007G181900 Sobic009G169900 Sobic009G169900 Sobic003G272200--Sobic009G169900 Sobic003G393400 Sobic003G393400 Sobic003G272200--Sobic003G393400 Sobic004G181400 Sobic004G181400 Sobic003G272200--Sobic004G181400 Sobic007G049300 Sobic007G049300 Sobic003G272200--Sobic007G049300 Sobic004G227400 Sobic004G227400 Sobic003G272200--Sobic004G227400 Sobic007G049700 Sobic007G049700 Sobic003G272200--Sobic007G049700 Sobic009G025800 Sobic009G025800 Sobic003G272200--Sobic009G025800 Sobic001G476100 Sobic001G476100 Sobic003G272200--Sobic001G476100 Sobic007G181900--Sobic003G272200 Sobic002G248600 Sobic002G248600 Sobic007G181900--Sobic002G248600 Sobic007G181900--Sobic003G393400 Sobic002G041900 Sobic002G041900 Sobic007G181900--Sobic002G041900 Sobic001G299900 Sobic001G299900 Sobic007G181900--Sobic001G299900 Sobic001G032400 Sobic001G032400 Sobic007G181900--Sobic001G032400 Sobic001G423600 Sobic001G423600 Sobic007G181900--Sobic001G423600 Sobic004G303500 Sobic004G303500 Sobic007G181900--Sobic004G303500 Sobic007G181900--Sobic001G476100 Sobic009G169900--Sobic003G272200 Sobic009G169900--Sobic003G393400 Sobic009G184300 Sobic009G184300 Sobic009G169900--Sobic009G184300 Sobic002G192101 Sobic002G192101 Sobic009G169900--Sobic002G192101 Sobic009G169900--Sobic007G181900 Sobic006G123000 Sobic006G123000 Sobic009G169900--Sobic006G123000 Sobic002G299800 Sobic002G299800 Sobic009G169900--Sobic002G299800 Sobic007G076800 Sobic007G076800 Sobic009G169900--Sobic007G076800 Sobic010G078800 Sobic010G078800 Sobic009G169900--Sobic010G078800 Sobic003G393400--Sobic007G181900 Sobic010G163200 Sobic010G163200 Sobic003G393400--Sobic010G163200 Sobic003G393400--Sobic009G184300 Sobic003G393400--Sobic001G423600 Sobic003G393400--Sobic003G272200 Sobic001G192400 Sobic001G192400 Sobic003G393400--Sobic001G192400 Sobic005G126900 Sobic005G126900 Sobic003G393400--Sobic005G126900 Sobic004G208000 Sobic004G208000 Sobic003G393400--Sobic004G208000 Sobic002G405000 Sobic002G405000 Sobic003G393400--Sobic002G405000 Sobic010G002600 Sobic010G002600 Sobic004G181400--Sobic010G002600 Sobic006G192900 Sobic006G192900 Sobic004G181400--Sobic006G192900 Sobic008G041500 Sobic008G041500 Sobic004G181400--Sobic008G041500 Sobic002G319900 Sobic002G319900 Sobic004G181400--Sobic002G319900 Sobic009G035000 Sobic009G035000 Sobic004G181400--Sobic009G035000 Sobic003G267150 Sobic003G267150 Sobic004G181400--Sobic003G267150 Sobic004G149150 Sobic004G149150 Sobic004G181400--Sobic004G149150 Sobic008G108100 Sobic008G108100 Sobic004G181400--Sobic008G108100 Sobic004G173300 Sobic004G173300 Sobic004G181400--Sobic004G173300 Sobic009G139100 Sobic009G139100 Sobic007G049300--Sobic009G139100 Sobic007G179100 Sobic007G179100 Sobic007G049300--Sobic007G179100 Sobic003G185000 Sobic003G185000 Sobic007G049300--Sobic003G185000 Sobic007G049300--Sobic008G041500 Sobic002G330600 Sobic002G330600 Sobic007G049300--Sobic002G330600 Sobic007G049300--Sobic010G002600 Sobic009G199401 Sobic009G199401 Sobic007G049300--Sobic009G199401 Sobic007G049300--Sobic002G319900 Sobic003G282400 Sobic003G282400 Sobic007G049300--Sobic003G282400 Sobic005G087800 Sobic005G087800 Sobic004G227400--Sobic005G087800 Sobic005G115800 Sobic005G115800 Sobic004G227400--Sobic005G115800 Sobic010G076500 Sobic010G076500 Sobic004G227400--Sobic010G076500 Sobic004G310600 Sobic004G310600 Sobic004G227400--Sobic004G310600 Sobic009G000700 Sobic009G000700 Sobic004G227400--Sobic009G000700 Sobic003G078501 Sobic003G078501 Sobic004G227400--Sobic003G078501 Sobic003G233900 Sobic003G233900 Sobic004G227400--Sobic003G233900 Sobic010G006700 Sobic010G006700 Sobic004G227400--Sobic010G006700 Sobic003G373150 Sobic003G373150 Sobic004G227400--Sobic003G373150 Sobic010G241400 Sobic010G241400 Sobic007G049700--Sobic010G241400 Sobic001G134150 Sobic001G134150 Sobic007G049700--Sobic001G134150 Sobic001G217850 Sobic001G217850 Sobic007G049700--Sobic001G217850 Sobic002G268600 Sobic002G268600 Sobic007G049700--Sobic002G268600 Sobic007G049700--Sobic004G181400 Sobic010G238000 Sobic010G238000 Sobic007G049700--Sobic010G238000 Sobic004G176950 Sobic004G176950 Sobic007G049700--Sobic004G176950 Sobic007G049700--Sobic006G192900 Sobic010G102700 Sobic010G102700 Sobic007G049700--Sobic010G102700 Sobic009G025800--Sobic009G199401 Sobic002G421100 Sobic002G421100 Sobic009G025800--Sobic002G421100 Sobic010G229025 Sobic010G229025 Sobic009G025800--Sobic010G229025 Sobic009G025800--Sobic006G192900 Sobic003G334500 Sobic003G334500 Sobic009G025800--Sobic003G334500 Sobic001G489400 Sobic001G489400 Sobic009G025800--Sobic001G489400 Sobic004G093800 Sobic004G093800 Sobic009G025800--Sobic004G093800 Sobic008G142500 Sobic008G142500 Sobic009G025800--Sobic008G142500 Sobic002G307500 Sobic002G307500 Sobic009G025800--Sobic002G307500 Sobic001G321700 Sobic001G321700 Sobic001G476100--Sobic001G321700 Sobic004G106200 Sobic004G106200 Sobic001G476100--Sobic004G106200 Sobic004G138400 Sobic004G138400 Sobic001G476100--Sobic004G138400 Sobic009G111800 Sobic009G111800 Sobic001G476100--Sobic009G111800 Sobic010G065001 Sobic010G065001 Sobic001G476100--Sobic010G065001 Sobic008G081500 Sobic008G081500 Sobic001G476100--Sobic008G081500 Sobic001G319000 Sobic001G319000 Sobic001G476100--Sobic001G319000 Sobic003G403600 Sobic003G403600 Sobic001G476100--Sobic003G403600 Sobic005G097500 Sobic005G097500 Sobic001G476100--Sobic005G097500
Octagon: transcription factors


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