Gene annotation
Transcriptome id Sobic.009G169900.1
Synonym Sb09g023110
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
glutaredoxin, putative, expressed
UniProt C5YZF0
Pfam PF00462
Panther DB PTHR10168 PTHR10168:SF95
NCBI CDD -
KEGG Orthology K17479; glutaredoxin domain-containing cysteine-rich protein 1
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G58530 : Glutaredoxin family protein
RAP-DB (Rice) LOC_Os05g39450.1 : glutaredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a043958 , Zm00025a039737 , Zm00025a037771
Brachypodium -
Barley HORVU3Hr1G087930.1
Wheat TraesCS3D02G343100
Populus -


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cDNA sequences
Sobic.009G169900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G272200 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.003G393400 exo70 exocyst complex subunit domain containing protein, expressed -
3 Sobic.009G184300 AP2 domain containing protein, expressed -
4 Sobic.002G192101 - -
5 Sobic.007G181900 expressed protein -
6 Sobic.006G123000 WD domain, G-beta repeat domain containing protein, expressed -
7 Sobic.002G299800 expressed protein -
8 Sobic.007G076800 B3 DNA binding domain containing protein, expressed -
9 Sobic.010G078800 expressed protein -
10 Sobic.007G038900 expressed protein -
11 Sobic.004G295400 amino acid kinase, putative, expressed K00930: acetylglutamate kinase
12 Sobic.006G278600 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed K10767: mRNA N6-methyladenine demethylase
13 Sobic.002G316301 - -
14 Sobic.002G058600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsFBX237 - F-box domain containing protein, expressed -
15 Sobic.005G098200 TKL_IRAK_CR4L.7 - The CR4L subfamily has homology with Crinkly4, expressed -
16 Sobic.009G064600 phototropic-responsive NPH3 family protein, putative, expressed -
17 Sobic.005G168500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
18 Sobic.009G235300 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K01247: DNA-3-methyladenine glycosylase II
19 Sobic.007G182101 "TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054) -
20 Sobic.009G190400 expressed protein -


Gene co-expression network
sample Sobic009G169900 Sobic009G169900 Sobic003G272200 Sobic003G272200 Sobic009G169900--Sobic003G272200 Sobic003G393400 Sobic003G393400 Sobic009G169900--Sobic003G393400 Sobic009G184300 Sobic009G184300 Sobic009G169900--Sobic009G184300 Sobic002G192101 Sobic002G192101 Sobic009G169900--Sobic002G192101 Sobic007G181900 Sobic007G181900 Sobic009G169900--Sobic007G181900 Sobic006G123000 Sobic006G123000 Sobic009G169900--Sobic006G123000 Sobic002G299800 Sobic002G299800 Sobic009G169900--Sobic002G299800 Sobic007G076800 Sobic007G076800 Sobic009G169900--Sobic007G076800 Sobic010G078800 Sobic010G078800 Sobic009G169900--Sobic010G078800 Sobic003G272200--Sobic007G181900 Sobic003G272200--Sobic009G169900 Sobic003G272200--Sobic003G393400 Sobic004G181400 Sobic004G181400 Sobic003G272200--Sobic004G181400 Sobic007G049300 Sobic007G049300 Sobic003G272200--Sobic007G049300 Sobic004G227400 Sobic004G227400 Sobic003G272200--Sobic004G227400 Sobic007G049700 Sobic007G049700 Sobic003G272200--Sobic007G049700 Sobic009G025800 Sobic009G025800 Sobic003G272200--Sobic009G025800 Sobic001G476100 Sobic001G476100 Sobic003G272200--Sobic001G476100 Sobic003G393400--Sobic007G181900 Sobic010G163200 Sobic010G163200 Sobic003G393400--Sobic010G163200 Sobic003G393400--Sobic009G184300 Sobic001G423600 Sobic001G423600 Sobic003G393400--Sobic001G423600 Sobic003G393400--Sobic003G272200 Sobic001G192400 Sobic001G192400 Sobic003G393400--Sobic001G192400 Sobic005G126900 Sobic005G126900 Sobic003G393400--Sobic005G126900 Sobic004G208000 Sobic004G208000 Sobic003G393400--Sobic004G208000 Sobic002G405000 Sobic002G405000 Sobic003G393400--Sobic002G405000 Sobic003G265300 Sobic003G265300 Sobic009G184300--Sobic003G265300 Sobic009G184300--Sobic010G078800 Sobic008G065100 Sobic008G065100 Sobic009G184300--Sobic008G065100 Sobic004G132700 Sobic004G132700 Sobic009G184300--Sobic004G132700 Sobic004G295400 Sobic004G295400 Sobic009G184300--Sobic004G295400 Sobic002G316301 Sobic002G316301 Sobic009G184300--Sobic002G316301 Sobic002G367850 Sobic002G367850 Sobic009G184300--Sobic002G367850 Sobic004G007032 Sobic004G007032 Sobic009G184300--Sobic004G007032 Sobic009G236500 Sobic009G236500 Sobic009G184300--Sobic009G236500 Sobic001G109100 Sobic001G109100 Sobic002G192101--Sobic001G109100 Sobic004G337500 Sobic004G337500 Sobic002G192101--Sobic004G337500 Sobic001G145100 Sobic001G145100 Sobic002G192101--Sobic001G145100 Sobic009G188800 Sobic009G188800 Sobic002G192101--Sobic009G188800 Sobic010G076500 Sobic010G076500 Sobic002G192101--Sobic010G076500 Sobic001G095750 Sobic001G095750 Sobic002G192101--Sobic001G095750 Sobic004G275100 Sobic004G275100 Sobic002G192101--Sobic004G275100 Sobic001G044800 Sobic001G044800 Sobic002G192101--Sobic001G044800 Sobic008G166700 Sobic008G166700 Sobic002G192101--Sobic008G166700 Sobic007G181900--Sobic003G272200 Sobic002G248600 Sobic002G248600 Sobic007G181900--Sobic002G248600 Sobic007G181900--Sobic003G393400 Sobic002G041900 Sobic002G041900 Sobic007G181900--Sobic002G041900 Sobic001G299900 Sobic001G299900 Sobic007G181900--Sobic001G299900 Sobic001G032400 Sobic001G032400 Sobic007G181900--Sobic001G032400 Sobic007G181900--Sobic001G423600 Sobic004G303500 Sobic004G303500 Sobic007G181900--Sobic004G303500 Sobic007G181900--Sobic001G476100 Sobic009G187000 Sobic009G187000 Sobic006G123000--Sobic009G187000 Sobic006G278600 Sobic006G278600 Sobic006G123000--Sobic006G278600 Sobic007G206700 Sobic007G206700 Sobic006G123000--Sobic007G206700 Sobic005G098200 Sobic005G098200 Sobic006G123000--Sobic005G098200 Sobic002G001300 Sobic002G001300 Sobic006G123000--Sobic002G001300 Sobic001G494150 Sobic001G494150 Sobic006G123000--Sobic001G494150 Sobic003G083700 Sobic003G083700 Sobic006G123000--Sobic003G083700 Sobic006G123000--Sobic007G076800 Sobic008G136900 Sobic008G136900 Sobic006G123000--Sobic008G136900 Sobic004G156600 Sobic004G156600 Sobic002G299800--Sobic004G156600 Sobic002G299800--Sobic010G078800 Sobic006G186200 Sobic006G186200 Sobic002G299800--Sobic006G186200 Sobic002G299800--Sobic007G076800 Sobic004G061600 Sobic004G061600 Sobic002G299800--Sobic004G061600 Sobic003G390300 Sobic003G390300 Sobic002G299800--Sobic003G390300 Sobic001G062700 Sobic001G062700 Sobic002G299800--Sobic001G062700 Sobic002G299800--Sobic008G136900 Sobic002G299800--Sobic003G265300 Sobic007G076800--Sobic003G390300 Sobic007G076800--Sobic004G061600 Sobic004G107400 Sobic004G107400 Sobic007G076800--Sobic004G107400 Sobic007G076800--Sobic008G136900 Sobic009G005800 Sobic009G005800 Sobic007G076800--Sobic009G005800 Sobic007G076800--Sobic001G062700 Sobic002G010500 Sobic002G010500 Sobic007G076800--Sobic002G010500 Sobic010G119600 Sobic010G119600 Sobic007G076800--Sobic010G119600 Sobic007G076800--Sobic007G206700 Sobic010G078800--Sobic003G265300 Sobic010G078800--Sobic002G367850 Sobic007G206550 Sobic007G206550 Sobic010G078800--Sobic007G206550 Sobic005G066800 Sobic005G066800 Sobic010G078800--Sobic005G066800 Sobic010G078800--Sobic002G299800 Sobic001G075900 Sobic001G075900 Sobic010G078800--Sobic001G075900 Sobic010G078800--Sobic004G295400 Sobic003G073620 Sobic003G073620 Sobic010G078800--Sobic003G073620 Sobic010G078800--Sobic009G184300
Octagon: transcription factors


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