Gene annotation
Transcriptome id Sobic.001G237300.1
Synonym Sb01g020970, WCBP1
Functional annotation wheat copper-binding protein (PubMedID : 26444258)
heavy-metal-associated domain-containing protein, putative, expressed
UniProt C5X0H2
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF151
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36950 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os10g30450.1 : heavy-metal-associated domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a006806 , Zm00025a011750 , Zm00025a017722 , Zm00025a055907 , Zm00025a011977 , Zm00025a053432
Brachypodium KQJ82290 , KQJ96875 , KQK23609 , PNT78181 , KQJ81970 , PNT60922
Barley HORVU5Hr1G062690.1 , HORVU5Hr1G057730.1 , HORVU5Hr1G124450.1 , HORVU5Hr1G124450.3 , HORVU5Hr1G124450.2 , HORVU2Hr1G011060.1 , HORVU1Hr1G036920.1 , HORVU1Hr1G036920.2
Wheat TraesCS1B02G157000 , TraesCS1A02G139900 , TraesCS1A02G139900 , TraesCS4A02G316200 , TraesCS2B02G077100 , TraesCS7B02G001700 , TraesCS7B02G001700 , TraesCS1D02G139400 , TraesCS5B02G571000 , TraesCS5B02G571000 , TraesCS5B02G571000 , TraesCS5D02G199500 , TraesCS5B02G563300 , TraesCS5D02G562000 , TraesCS5B02G191700 , TraesCS2B02G569600 , TraesCS5B02G571000 , TraesCS5D02G562000 , TraesCS5A02G191400
Populus -


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cDNA sequences
Sobic.001G237300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
2 Sobic.004G257900 - -
3 Sobic.008G160100 - -
4 Sobic.008G143901 - -
5 Sobic.006G243000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB4, putative, expressed -
6 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
7 Sobic.010G220100 cell cycle control protein, putative, expressed -
8 Sobic.007G213500 expressed protein -
9 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
10 Sobic.009G252600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
11 Sobic.004G337700 expressed protein -
12 Sobic.003G106100 expressed protein -
13 Sobic.004G310400 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
14 Sobic.003G416900 esterase, putative, expressed -
15 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
16 Sobic.002G395900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
17 Sobic.002G197400 expressed protein -
18 Sobic.001G533900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G212800 prefoldin, putative, expressed K04797: pfdA, prefoldin alpha subunit
20 Sobic.003G118500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic001G237300 Sobic001G237300 Sobic004G026000 Sobic004G026000 Sobic001G237300--Sobic004G026000 Sobic004G257900 Sobic004G257900 Sobic001G237300--Sobic004G257900 Sobic008G160100 Sobic008G160100 Sobic001G237300--Sobic008G160100 Sobic008G143901 Sobic008G143901 Sobic001G237300--Sobic008G143901 Sobic006G243000 Sobic006G243000 Sobic001G237300--Sobic006G243000 Sobic001G096200 Sobic001G096200 Sobic001G237300--Sobic001G096200 Sobic010G220100 Sobic010G220100 Sobic001G237300--Sobic010G220100 Sobic007G213500 Sobic007G213500 Sobic001G237300--Sobic007G213500 Sobic004G314100 Sobic004G314100 Sobic001G237300--Sobic004G314100 Sobic004G310400 Sobic004G310400 Sobic004G026000--Sobic004G310400 Sobic004G026000--Sobic007G213500 Sobic004G026000--Sobic004G314100 Sobic001G104100 Sobic001G104100 Sobic004G026000--Sobic001G104100 Sobic004G026000--Sobic001G096200 Sobic006G121200 Sobic006G121200 Sobic004G026000--Sobic006G121200 Sobic003G106100 Sobic003G106100 Sobic004G026000--Sobic003G106100 Sobic004G231501 Sobic004G231501 Sobic004G026000--Sobic004G231501 Sobic001G028500 Sobic001G028500 Sobic004G026000--Sobic001G028500 Sobic002G197500 Sobic002G197500 Sobic004G257900--Sobic002G197500 Sobic002G207601 Sobic002G207601 Sobic004G257900--Sobic002G207601 Sobic001G156401 Sobic001G156401 Sobic004G257900--Sobic001G156401 Sobic004G257900--Sobic008G143901 Sobic006G213350 Sobic006G213350 Sobic004G257900--Sobic006G213350 Sobic004G257900--Sobic008G160100 Sobic004G257900--Sobic004G310400 Sobic007G189900 Sobic007G189900 Sobic004G257900--Sobic007G189900 Sobic004G257900--Sobic001G096200 Sobic001G520000 Sobic001G520000 Sobic008G160100--Sobic001G520000 Sobic001G483001 Sobic001G483001 Sobic008G160100--Sobic001G483001 Sobic008G160100--Sobic006G213350 Sobic005G228650 Sobic005G228650 Sobic008G160100--Sobic005G228650 Sobic008G160100--Sobic004G026000 Sobic008G160100--Sobic004G310400 Sobic004G315400 Sobic004G315400 Sobic008G160100--Sobic004G315400 Sobic008G160100--Sobic008G143901 Sobic010G012200 Sobic010G012200 Sobic008G160100--Sobic010G012200 Sobic008G143901--Sobic001G483001 Sobic008G143901--Sobic006G243000 Sobic008G143901--Sobic006G213350 Sobic002G413700 Sobic002G413700 Sobic008G143901--Sobic002G413700 Sobic008G143901--Sobic001G520000 Sobic008G143901--Sobic008G160100 Sobic001G139800 Sobic001G139800 Sobic008G143901--Sobic001G139800 Sobic008G143901--Sobic001G096200 Sobic008G143901--Sobic001G156401 Sobic006G243000--Sobic008G143901 Sobic006G243000--Sobic001G096200 Sobic006G243000--Sobic006G213350 Sobic002G395900 Sobic002G395900 Sobic006G243000--Sobic002G395900 Sobic006G243000--Sobic001G483001 Sobic006G243000--Sobic001G520000 Sobic006G243000--Sobic004G026000 Sobic009G045100 Sobic009G045100 Sobic006G243000--Sobic009G045100 Sobic001G018550 Sobic001G018550 Sobic006G243000--Sobic001G018550 Sobic001G096200--Sobic004G310400 Sobic001G096200--Sobic004G026000 Sobic001G096200--Sobic001G520000 Sobic001G096200--Sobic004G314100 Sobic003G155800 Sobic003G155800 Sobic001G096200--Sobic003G155800 Sobic001G096200--Sobic006G243000 Sobic003G118500 Sobic003G118500 Sobic001G096200--Sobic003G118500 Sobic003G253700 Sobic003G253700 Sobic001G096200--Sobic003G253700 Sobic001G096200--Sobic004G231501 Sobic008G185000 Sobic008G185000 Sobic010G220100--Sobic008G185000 Sobic001G341900 Sobic001G341900 Sobic010G220100--Sobic001G341900 Sobic001G435800 Sobic001G435800 Sobic010G220100--Sobic001G435800 Sobic002G252700 Sobic002G252700 Sobic010G220100--Sobic002G252700 Sobic009G114900 Sobic009G114900 Sobic010G220100--Sobic009G114900 Sobic004G337700 Sobic004G337700 Sobic010G220100--Sobic004G337700 Sobic005G155001 Sobic005G155001 Sobic010G220100--Sobic005G155001 Sobic007G061500 Sobic007G061500 Sobic010G220100--Sobic007G061500 Sobic010G220100--Sobic007G213500 Sobic007G213500--Sobic004G026000 Sobic007G213500--Sobic006G121200 Sobic007G213500--Sobic004G314100 Sobic007G017300 Sobic007G017300 Sobic007G213500--Sobic007G017300 Sobic001G483200 Sobic001G483200 Sobic007G213500--Sobic001G483200 Sobic001G368000 Sobic001G368000 Sobic007G213500--Sobic001G368000 Sobic007G213500--Sobic003G106100 Sobic007G213500--Sobic007G061500 Sobic007G213500--Sobic001G104100 Sobic004G314100--Sobic007G061500 Sobic004G314100--Sobic003G106100 Sobic004G314100--Sobic004G231501 Sobic004G314100--Sobic001G028500 Sobic004G314100--Sobic004G026000 Sobic004G314100--Sobic007G213500 Sobic004G314100--Sobic004G310400 Sobic004G314100--Sobic001G104100 Sobic004G314100--Sobic007G017300
Octagon: transcription factors


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