Gene annotation
Transcriptome id Sobic.009G025800.1
Synonym Sb09g002180, TET3
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
tetraspanin family protein, putative, expressed
UniProt C5YZ33
Pfam PF00335
Panther DB PTHR32191 PTHR32191:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G45600 : tetraspanin3
RAP-DB (Rice) LOC_Os05g03140.1 : tetraspanin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a040754 , Zm00025a038197 , Zm00025a039028
Brachypodium KQK07839 , KQK16868
Barley HORVU1Hr1G012690.1 , HORVU1Hr1G012690.2 , HORVU1Hr1G012690.4 , HORVU3Hr1G034560.4 , HORVU3Hr1G034560.1 , HORVU3Hr1G034560.3 , HORVU3Hr1G034560.2 , HORVU1Hr1G012690.3
Wheat TraesCS7D02G488300 , TraesCS1A02G062100 , TraesCS7A02G500900 , TraesCS7B02G408200 , TraesCS1D02G063000 , TraesCS1B02G080500
Populus -


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cDNA sequences
Sobic.009G025800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G199401 - -
2 Sobic.002G421100 KIP1, putative, expressed -
3 Sobic.010G229025 - -
4 Sobic.006G192900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
5 Sobic.003G334500 - -
6 Sobic.001G489400 3-dehydroquinate synthase, putative, expressed -
7 Sobic.004G093800 integral membrane protein, putative, expressed -
8 Sobic.008G142500 Leucine Rich Repeat family protein, expressed -
9 Sobic.002G307500 MATH domain containing protein, expressed -
10 Sobic.003G162600 expressed protein -
11 Sobic.009G134700 - -
12 Sobic.006G221500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed -
13 Sobic.003G068100 receptor kinase, putative, expressed -
14 Sobic.006G083050 - -
15 Sobic.001G014600 - -
16 Sobic.009G035000 expressed protein -
17 Sobic.009G025750 - -
18 Sobic.003G357900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@strictosidine synthase, putative, expressed -
19 Sobic.008G041500 - -
20 Sobic.001G183550 - -


Gene co-expression network
sample Sobic009G025800 Sobic009G025800 Sobic009G199401 Sobic009G199401 Sobic009G025800--Sobic009G199401 Sobic002G421100 Sobic002G421100 Sobic009G025800--Sobic002G421100 Sobic010G229025 Sobic010G229025 Sobic009G025800--Sobic010G229025 Sobic006G192900 Sobic006G192900 Sobic009G025800--Sobic006G192900 Sobic003G334500 Sobic003G334500 Sobic009G025800--Sobic003G334500 Sobic001G489400 Sobic001G489400 Sobic009G025800--Sobic001G489400 Sobic004G093800 Sobic004G093800 Sobic009G025800--Sobic004G093800 Sobic008G142500 Sobic008G142500 Sobic009G025800--Sobic008G142500 Sobic002G307500 Sobic002G307500 Sobic009G025800--Sobic002G307500 Sobic009G199401--Sobic002G421100 Sobic009G199401--Sobic001G489400 Sobic009G199401--Sobic010G229025 Sobic003G162600 Sobic003G162600 Sobic009G199401--Sobic003G162600 Sobic006G221500 Sobic006G221500 Sobic009G199401--Sobic006G221500 Sobic009G199401--Sobic004G093800 Sobic009G199401--Sobic008G142500 Sobic005G116700 Sobic005G116700 Sobic009G199401--Sobic005G116700 Sobic004G186950 Sobic004G186950 Sobic009G199401--Sobic004G186950 Sobic002G421100--Sobic009G199401 Sobic002G421100--Sobic008G142500 Sobic006G083050 Sobic006G083050 Sobic002G421100--Sobic006G083050 Sobic002G421100--Sobic010G229025 Sobic002G421100--Sobic001G489400 Sobic002G421100--Sobic003G162600 Sobic003G068100 Sobic003G068100 Sobic002G421100--Sobic003G068100 Sobic002G421100--Sobic006G221500 Sobic001G014600 Sobic001G014600 Sobic002G421100--Sobic001G014600 Sobic010G229025--Sobic009G199401 Sobic010G229025--Sobic001G489400 Sobic010G229025--Sobic002G421100 Sobic010G229025--Sobic004G093800 Sobic001G183550 Sobic001G183550 Sobic010G229025--Sobic001G183550 Sobic010G229025--Sobic002G307500 Sobic010G229025--Sobic003G162600 Sobic009G025750 Sobic009G025750 Sobic010G229025--Sobic009G025750 Sobic010G229025--Sobic006G083050 Sobic010G241400 Sobic010G241400 Sobic006G192900--Sobic010G241400 Sobic010G002600 Sobic010G002600 Sobic006G192900--Sobic010G002600 Sobic006G192900--Sobic002G307500 Sobic009G035000 Sobic009G035000 Sobic006G192900--Sobic009G035000 Sobic006G009200 Sobic006G009200 Sobic006G192900--Sobic006G009200 Sobic008G041500 Sobic008G041500 Sobic006G192900--Sobic008G041500 Sobic004G181400 Sobic004G181400 Sobic006G192900--Sobic004G181400 Sobic006G192900--Sobic004G093800 Sobic002G062400 Sobic002G062400 Sobic006G192900--Sobic002G062400 Sobic003G334500--Sobic008G041500 Sobic007G179100 Sobic007G179100 Sobic003G334500--Sobic007G179100 Sobic009G134700 Sobic009G134700 Sobic003G334500--Sobic009G134700 Sobic003G334500--Sobic006G083050 Sobic006G214800 Sobic006G214800 Sobic003G334500--Sobic006G214800 Sobic001G180950 Sobic001G180950 Sobic003G334500--Sobic001G180950 Sobic010G156300 Sobic010G156300 Sobic003G334500--Sobic010G156300 Sobic003G334500--Sobic008G142500 Sobic010G166850 Sobic010G166850 Sobic003G334500--Sobic010G166850 Sobic001G489400--Sobic009G199401 Sobic001G489400--Sobic003G162600 Sobic001G489400--Sobic004G093800 Sobic001G489400--Sobic010G229025 Sobic001G489400--Sobic002G421100 Sobic001G489400--Sobic002G307500 Sobic001G489400--Sobic006G221500 Sobic002G207601 Sobic002G207601 Sobic001G489400--Sobic002G207601 Sobic001G489400--Sobic005G116700 Sobic004G093800--Sobic002G307500 Sobic004G093800--Sobic001G489400 Sobic004G093800--Sobic009G199401 Sobic004G173300 Sobic004G173300 Sobic004G093800--Sobic004G173300 Sobic004G093800--Sobic010G002600 Sobic004G093800--Sobic008G142500 Sobic004G093800--Sobic010G229025 Sobic004G093800--Sobic006G192900 Sobic005G131500 Sobic005G131500 Sobic004G093800--Sobic005G131500 Sobic008G142500--Sobic001G014600 Sobic009G173700 Sobic009G173700 Sobic008G142500--Sobic009G173700 Sobic001G326500 Sobic001G326500 Sobic008G142500--Sobic001G326500 Sobic008G142500--Sobic009G035000 Sobic008G142500--Sobic006G083050 Sobic005G116800 Sobic005G116800 Sobic008G142500--Sobic005G116800 Sobic008G142500--Sobic002G421100 Sobic008G142500--Sobic003G068100 Sobic008G142500--Sobic006G221500 Sobic002G307500--Sobic004G093800 Sobic002G307500--Sobic006G192900 Sobic002G307500--Sobic001G489400 Sobic002G307500--Sobic010G229025 Sobic002G307500--Sobic009G199401 Sobic006G235801 Sobic006G235801 Sobic002G307500--Sobic006G235801 Sobic002G307500--Sobic006G221500 Sobic002G307500--Sobic010G002600 Sobic006G136300 Sobic006G136300 Sobic002G307500--Sobic006G136300
Octagon: transcription factors


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