Gene annotation
Transcriptome id Sobic.003G276750.1
Synonym -
Functional annotation -
UniProt A0A1W0VZ72
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G120200 expressed protein -
2 Sobic.006G063700 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
3 Sobic.008G164800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@No apical meristem protein, putative, expressed -
4 Sobic.001G468100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G274800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.002G058500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD-linked oxidoreductase protein, putative, expressed K18204: D-2-hydroxyglutarate dehydrogenase
7 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
8 Sobic.003G338300 - -
9 Sobic.007G209300 expressed protein -
10 Sobic.007G186200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@solute carrier family 35 member F1, putative, expressed K15287: solute carrier family 35, member F1/2
11 Sobic.001G395700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ proteins of unknown function domain containing protein, expressed -
12 Sobic.006G139000 carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed -
13 Sobic.007G092700 - -
14 Sobic.007G216201 - -
15 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
16 Sobic.002G195000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@proline-rich protein 6, putative, expressed -
17 Sobic.003G105800 No apical meristem protein, putative, expressed -
18 Sobic.003G428400 beta-galactosidase, putative, expressed K01190: beta-galactosidase
19 Sobic.003G304200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phospholipase, patatin family, putative, expressed K14674: TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase
20 Sobic.007G034000 expressed protein -


Gene co-expression network
sample Sobic003G276750 Sobic003G276750 Sobic009G120200 Sobic009G120200 Sobic003G276750--Sobic009G120200 Sobic006G063700 Sobic006G063700 Sobic003G276750--Sobic006G063700 Sobic008G164800 Sobic008G164800 Sobic003G276750--Sobic008G164800 Sobic001G468100 Sobic001G468100 Sobic003G276750--Sobic001G468100 Sobic001G274800 Sobic001G274800 Sobic003G276750--Sobic001G274800 Sobic002G058500 Sobic002G058500 Sobic003G276750--Sobic002G058500 Sobic006G181300 Sobic006G181300 Sobic003G276750--Sobic006G181300 Sobic003G338300 Sobic003G338300 Sobic003G276750--Sobic003G338300 Sobic007G209300 Sobic007G209300 Sobic003G276750--Sobic007G209300 Sobic001G150600 Sobic001G150600 Sobic009G120200--Sobic001G150600 Sobic005G221000 Sobic005G221000 Sobic009G120200--Sobic005G221000 Sobic003G315500 Sobic003G315500 Sobic009G120200--Sobic003G315500 Sobic001G150650 Sobic001G150650 Sobic009G120200--Sobic001G150650 Sobic006G100332 Sobic006G100332 Sobic009G120200--Sobic006G100332 Sobic010G212350 Sobic010G212350 Sobic009G120200--Sobic010G212350 Sobic004G255000 Sobic004G255000 Sobic009G120200--Sobic004G255000 Sobic003G087200 Sobic003G087200 Sobic009G120200--Sobic003G087200 Sobic002G210800 Sobic002G210800 Sobic009G120200--Sobic002G210800 Sobic001G524000 Sobic001G524000 Sobic006G063700--Sobic001G524000 Sobic003G304200 Sobic003G304200 Sobic006G063700--Sobic003G304200 Sobic005G197100 Sobic005G197100 Sobic006G063700--Sobic005G197100 Sobic001G106100 Sobic001G106100 Sobic006G063700--Sobic001G106100 Sobic006G004500 Sobic006G004500 Sobic006G063700--Sobic006G004500 Sobic009G166600 Sobic009G166600 Sobic006G063700--Sobic009G166600 Sobic008G021000 Sobic008G021000 Sobic006G063700--Sobic008G021000 Sobic004G237400 Sobic004G237400 Sobic006G063700--Sobic004G237400 Sobic007G088100 Sobic007G088100 Sobic006G063700--Sobic007G088100 Sobic004G320600 Sobic004G320600 Sobic008G164800--Sobic004G320600 Sobic004G321800 Sobic004G321800 Sobic008G164800--Sobic004G321800 Sobic006G226400 Sobic006G226400 Sobic008G164800--Sobic006G226400 Sobic008G164800--Sobic006G100332 Sobic008G164800--Sobic003G087200 Sobic008G164800--Sobic006G181300 Sobic007G068100 Sobic007G068100 Sobic008G164800--Sobic007G068100 Sobic007G186200 Sobic007G186200 Sobic008G164800--Sobic007G186200 Sobic003G388251 Sobic003G388251 Sobic008G164800--Sobic003G388251 Sobic001G468100--Sobic007G186200 Sobic009G207600 Sobic009G207600 Sobic001G468100--Sobic009G207600 Sobic001G468100--Sobic002G058500 Sobic001G468100--Sobic001G150600 Sobic008G153400 Sobic008G153400 Sobic001G468100--Sobic008G153400 Sobic001G325200 Sobic001G325200 Sobic001G468100--Sobic001G325200 Sobic001G468100--Sobic004G321800 Sobic001G438600 Sobic001G438600 Sobic001G468100--Sobic001G438600 Sobic001G468100--Sobic003G087200 Sobic003G184900 Sobic003G184900 Sobic001G274800--Sobic003G184900 Sobic001G274800--Sobic006G100332 Sobic001G274800--Sobic004G321800 Sobic002G324000 Sobic002G324000 Sobic001G274800--Sobic002G324000 Sobic004G206401 Sobic004G206401 Sobic001G274800--Sobic004G206401 Sobic003G105800 Sobic003G105800 Sobic001G274800--Sobic003G105800 Sobic001G274800--Sobic007G068100 Sobic001G274800--Sobic007G186200 Sobic001G182500 Sobic001G182500 Sobic001G274800--Sobic001G182500 Sobic006G139000 Sobic006G139000 Sobic002G058500--Sobic006G139000 Sobic001G227800 Sobic001G227800 Sobic002G058500--Sobic001G227800 Sobic001G395700 Sobic001G395700 Sobic002G058500--Sobic001G395700 Sobic005G019800 Sobic005G019800 Sobic002G058500--Sobic005G019800 Sobic002G215700 Sobic002G215700 Sobic002G058500--Sobic002G215700 Sobic004G101900 Sobic004G101900 Sobic002G058500--Sobic004G101900 Sobic003G226200 Sobic003G226200 Sobic002G058500--Sobic003G226200 Sobic004G124200 Sobic004G124200 Sobic002G058500--Sobic004G124200 Sobic001G280000 Sobic001G280000 Sobic002G058500--Sobic001G280000 Sobic001G069900 Sobic001G069900 Sobic006G181300--Sobic001G069900 Sobic006G181300--Sobic003G087200 Sobic009G114000 Sobic009G114000 Sobic006G181300--Sobic009G114000 Sobic006G091700 Sobic006G091700 Sobic006G181300--Sobic006G091700 Sobic006G181300--Sobic004G321800 Sobic006G181300--Sobic009G207600 Sobic001G015500 Sobic001G015500 Sobic006G181300--Sobic001G015500 Sobic008G079300 Sobic008G079300 Sobic006G181300--Sobic008G079300 Sobic006G181300--Sobic001G150600 Sobic003G084000 Sobic003G084000 Sobic003G338300--Sobic003G084000 Sobic002G160400 Sobic002G160400 Sobic003G338300--Sobic002G160400 Sobic004G188800 Sobic004G188800 Sobic003G338300--Sobic004G188800 Sobic009G212600 Sobic009G212600 Sobic003G338300--Sobic009G212600 Sobic005G079900 Sobic005G079900 Sobic003G338300--Sobic005G079900 Sobic003G338300--Sobic001G395700 Sobic005G046250 Sobic005G046250 Sobic003G338300--Sobic005G046250 Sobic003G029800 Sobic003G029800 Sobic003G338300--Sobic003G029800 Sobic009G234800 Sobic009G234800 Sobic003G338300--Sobic009G234800 Sobic007G216201 Sobic007G216201 Sobic007G209300--Sobic007G216201 Sobic001G520400 Sobic001G520400 Sobic007G209300--Sobic001G520400 Sobic007G209300--Sobic003G276750 Sobic002G190500 Sobic002G190500 Sobic007G209300--Sobic002G190500 Sobic003G025900 Sobic003G025900 Sobic007G209300--Sobic003G025900 Sobic007G209300--Sobic005G019800 Sobic004G060900 Sobic004G060900 Sobic007G209300--Sobic004G060900 Sobic007G163901 Sobic007G163901 Sobic007G209300--Sobic007G163901 Sobic003G241050 Sobic003G241050 Sobic007G209300--Sobic003G241050
Octagon: transcription factors


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