Gene annotation
Transcriptome id Sobic.003G297900.1
Synonym Sb03g034800
Functional annotation heat- and acid-stable phosphoprotein, putative, expressed
UniProt C5XK58
Pfam PF10252
Panther DB PTHR22055 PTHR22055:SF2
NCBI CDD KOG3375; Phosphoprotein/predicted coiled-coil protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G46020 : -
RAP-DB (Rice) LOC_Os01g54920.1 : heat- and acid-stable phosphoprotein, putative, expressed
MaizeGDB (Corn) Zm00025a040039 , Zm00025a037937 , Zm00025a027626
Brachypodium KQK09762
Barley -
Wheat TraesCS3D02G291400 , TraesCS3D02G291400 , TraesCS3A02G291700 , TraesCS3B02G326300 , TraesCS3B02G326300
Populus -


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cDNA sequences
Sobic.003G297900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
2 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
3 Sobic.002G054300 ABC transporter, ATP-binding protein, putative, expressed K06184: ATP-binding cassette, subfamily F, member 1
4 Sobic.001G358000 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed K12900: FUS-interacting serine-arginine-rich protein 1
5 Sobic.001G332500 WRKY81, expressed -
6 Sobic.002G117000 expressed protein -
7 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
8 Sobic.009G165800 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
9 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
10 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
11 Sobic.004G121100 expressed protein -
12 Sobic.010G184100 mitochondrial carrier protein, putative, expressed -
13 Sobic.001G260400 transcription initiation factor, putative, expressed K03136: TFIIE1, GTF2E1, TFA1, transcription initiation factor TFIIE subunit alpha
14 Sobic.009G179700 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
15 Sobic.004G164400 expressed protein -
16 Sobic.002G352600 expressed protein -
17 Sobic.006G017000 WD domain, G-beta repeat domain containing protein, expressed K12862: PLRG1, PRL1, pleiotropic regulator 1
18 Sobic.007G207400 Ser/Thr protein phosphatase family protein, putative, expressed K04460: serine/threonine-protein phosphatase 5
19 Sobic.003G015900 CWC15 homolog A, putative, expressed K12863: protein CWC15
20 Sobic.001G113000 tRNA synthetases class II domain containing protein, expressed K01893: NARS, asparaginyl-tRNA synthetase


Gene co-expression network
sample Sobic003G297900 Sobic003G297900 Sobic001G080700 Sobic001G080700 Sobic003G297900--Sobic001G080700 Sobic002G350300 Sobic002G350300 Sobic003G297900--Sobic002G350300 Sobic002G054300 Sobic002G054300 Sobic003G297900--Sobic002G054300 Sobic001G358000 Sobic001G358000 Sobic003G297900--Sobic001G358000 Sobic001G332500 Sobic001G332500 Sobic003G297900--Sobic001G332500 Sobic002G117000 Sobic002G117000 Sobic003G297900--Sobic002G117000 Sobic007G075900 Sobic007G075900 Sobic003G297900--Sobic007G075900 Sobic009G165800 Sobic009G165800 Sobic003G297900--Sobic009G165800 Sobic001G392300 Sobic001G392300 Sobic003G297900--Sobic001G392300 Sobic001G080700--Sobic001G392300 Sobic001G080700--Sobic009G165800 Sobic010G251000 Sobic010G251000 Sobic001G080700--Sobic010G251000 Sobic004G066200 Sobic004G066200 Sobic001G080700--Sobic004G066200 Sobic003G264200 Sobic003G264200 Sobic001G080700--Sobic003G264200 Sobic009G222500 Sobic009G222500 Sobic001G080700--Sobic009G222500 Sobic006G101700 Sobic006G101700 Sobic001G080700--Sobic006G101700 Sobic001G080700--Sobic001G332500 Sobic001G007000 Sobic001G007000 Sobic001G080700--Sobic001G007000 Sobic008G179700 Sobic008G179700 Sobic002G350300--Sobic008G179700 Sobic009G205200 Sobic009G205200 Sobic002G350300--Sobic009G205200 Sobic009G179700 Sobic009G179700 Sobic002G350300--Sobic009G179700 Sobic001G107500 Sobic001G107500 Sobic002G350300--Sobic001G107500 Sobic001G512700 Sobic001G512700 Sobic002G350300--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic002G350300--Sobic007G132400 Sobic010G028300 Sobic010G028300 Sobic002G350300--Sobic010G028300 Sobic001G119300 Sobic001G119300 Sobic002G350300--Sobic001G119300 Sobic006G088100 Sobic006G088100 Sobic002G350300--Sobic006G088100 Sobic002G054300--Sobic001G080700 Sobic001G386300 Sobic001G386300 Sobic002G054300--Sobic001G386300 Sobic001G375700 Sobic001G375700 Sobic002G054300--Sobic001G375700 Sobic002G054300--Sobic001G332500 Sobic002G054300--Sobic001G392300 Sobic002G054300--Sobic009G205200 Sobic002G161800 Sobic002G161800 Sobic002G054300--Sobic002G161800 Sobic002G054300--Sobic008G179700 Sobic002G054300--Sobic010G251000 Sobic001G358000--Sobic009G165800 Sobic004G353200 Sobic004G353200 Sobic001G358000--Sobic004G353200 Sobic004G146800 Sobic004G146800 Sobic001G358000--Sobic004G146800 Sobic010G223700 Sobic010G223700 Sobic001G358000--Sobic010G223700 Sobic004G121100 Sobic004G121100 Sobic001G358000--Sobic004G121100 Sobic001G113000 Sobic001G113000 Sobic001G358000--Sobic001G113000 Sobic001G358000--Sobic001G080700 Sobic006G200600 Sobic006G200600 Sobic001G358000--Sobic006G200600 Sobic007G019800 Sobic007G019800 Sobic001G358000--Sobic007G019800 Sobic001G332500--Sobic001G080700 Sobic001G122832 Sobic001G122832 Sobic001G332500--Sobic001G122832 Sobic003G253600 Sobic003G253600 Sobic001G332500--Sobic003G253600 Sobic001G332500--Sobic001G375700 Sobic001G332500--Sobic001G392300 Sobic003G221900 Sobic003G221900 Sobic001G332500--Sobic003G221900 Sobic007G136800 Sobic007G136800 Sobic001G332500--Sobic007G136800 Sobic003G398700 Sobic003G398700 Sobic001G332500--Sobic003G398700 Sobic006G185100 Sobic006G185100 Sobic001G332500--Sobic006G185100 Sobic002G117000--Sobic001G080700 Sobic002G117000--Sobic003G264200 Sobic010G074300 Sobic010G074300 Sobic002G117000--Sobic010G074300 Sobic001G539500 Sobic001G539500 Sobic002G117000--Sobic001G539500 Sobic003G220800 Sobic003G220800 Sobic002G117000--Sobic003G220800 Sobic004G131800 Sobic004G131800 Sobic002G117000--Sobic004G131800 Sobic008G070800 Sobic008G070800 Sobic002G117000--Sobic008G070800 Sobic002G117000--Sobic001G392300 Sobic002G117000--Sobic001G332500 Sobic007G075900--Sobic004G353200 Sobic007G075900--Sobic001G392300 Sobic009G177500 Sobic009G177500 Sobic007G075900--Sobic009G177500 Sobic009G044800 Sobic009G044800 Sobic007G075900--Sobic009G044800 Sobic008G014500 Sobic008G014500 Sobic007G075900--Sobic008G014500 Sobic004G274200 Sobic004G274200 Sobic007G075900--Sobic004G274200 Sobic003G401100 Sobic003G401100 Sobic007G075900--Sobic003G401100 Sobic004G084300 Sobic004G084300 Sobic007G075900--Sobic004G084300 Sobic009G124700 Sobic009G124700 Sobic007G075900--Sobic009G124700 Sobic009G165800--Sobic001G080700 Sobic001G047400 Sobic001G047400 Sobic009G165800--Sobic001G047400 Sobic009G165800--Sobic006G101700 Sobic002G110700 Sobic002G110700 Sobic009G165800--Sobic002G110700 Sobic003G015900 Sobic003G015900 Sobic009G165800--Sobic003G015900 Sobic010G083700 Sobic010G083700 Sobic009G165800--Sobic010G083700 Sobic009G165800--Sobic010G251000 Sobic009G165800--Sobic004G121100 Sobic009G165800--Sobic003G264200 Sobic001G392300--Sobic001G080700 Sobic007G061000 Sobic007G061000 Sobic001G392300--Sobic007G061000 Sobic001G392300--Sobic009G177500 Sobic001G392300--Sobic004G353200 Sobic001G392300--Sobic001G007000 Sobic001G392300--Sobic007G075900 Sobic001G392300--Sobic009G044800 Sobic008G047800 Sobic008G047800 Sobic001G392300--Sobic008G047800 Sobic001G392300--Sobic006G200600
Octagon: transcription factors


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