Gene annotation
Transcriptome id Sobic.002G117000.1
Synonym Sb02g009980
Functional annotation expressed protein
UniProt C5X4E8
Pfam -
Panther DB PTHR34797 PTHR34797:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45980 : -
RAP-DB (Rice) LOC_Os07g23550.1 : expressed protein
MaizeGDB (Corn) Zm00025a012456 , Zm00025a045733
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G117000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
2 Sobic.003G264200 Ser/Thr protein phosphatase family protein, putative, expressed K15498: serine/threonine-protein phosphatase 6 catalytic subunit
3 Sobic.010G074300 smr domain containing protein, expressed -
4 Sobic.001G539500 SKP1, putative, expressed -
5 Sobic.003G220800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
6 Sobic.004G131800 sirohydrochlorin ferrochelatase, putative, expressed -
7 Sobic.008G070800 expressed protein -
8 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
9 Sobic.001G332500 WRKY81, expressed -
10 Sobic.003G297900 heat- and acid-stable phosphoprotein, putative, expressed -
11 Sobic.002G383800 GTP-binding protein, putative, expressed K06944: uncharacterized protein
12 Sobic.002G047700 CK1_CaseinKinase_1a.6 - CK1 includes the casein kinase 1 kinases, expressed -
13 Sobic.007G052300 expressed protein -
14 Sobic.009G222500 expressed protein -
15 Sobic.003G176000 lipase family protein, putative, expressed -
16 Sobic.004G353800 expressed protein -
17 Sobic.003G253600 protein kinase domain containing protein, expressed -
18 Sobic.001G221800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
19 Sobic.006G096900 expressed protein -
20 Sobic.009G084000 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4


Gene co-expression network
sample Sobic002G117000 Sobic002G117000 Sobic001G080700 Sobic001G080700 Sobic002G117000--Sobic001G080700 Sobic003G264200 Sobic003G264200 Sobic002G117000--Sobic003G264200 Sobic010G074300 Sobic010G074300 Sobic002G117000--Sobic010G074300 Sobic001G539500 Sobic001G539500 Sobic002G117000--Sobic001G539500 Sobic003G220800 Sobic003G220800 Sobic002G117000--Sobic003G220800 Sobic004G131800 Sobic004G131800 Sobic002G117000--Sobic004G131800 Sobic008G070800 Sobic008G070800 Sobic002G117000--Sobic008G070800 Sobic001G392300 Sobic001G392300 Sobic002G117000--Sobic001G392300 Sobic001G332500 Sobic001G332500 Sobic002G117000--Sobic001G332500 Sobic001G080700--Sobic001G392300 Sobic009G165800 Sobic009G165800 Sobic001G080700--Sobic009G165800 Sobic010G251000 Sobic010G251000 Sobic001G080700--Sobic010G251000 Sobic004G066200 Sobic004G066200 Sobic001G080700--Sobic004G066200 Sobic001G080700--Sobic003G264200 Sobic009G222500 Sobic009G222500 Sobic001G080700--Sobic009G222500 Sobic006G101700 Sobic006G101700 Sobic001G080700--Sobic006G101700 Sobic001G080700--Sobic001G332500 Sobic001G007000 Sobic001G007000 Sobic001G080700--Sobic001G007000 Sobic001G031100 Sobic001G031100 Sobic003G264200--Sobic001G031100 Sobic003G264200--Sobic001G080700 Sobic007G166400 Sobic007G166400 Sobic003G264200--Sobic007G166400 Sobic003G264200--Sobic009G222500 Sobic006G049700 Sobic006G049700 Sobic003G264200--Sobic006G049700 Sobic003G264200--Sobic006G101700 Sobic002G047700 Sobic002G047700 Sobic003G264200--Sobic002G047700 Sobic003G264200--Sobic009G165800 Sobic007G166100 Sobic007G166100 Sobic003G264200--Sobic007G166100 Sobic010G147100 Sobic010G147100 Sobic010G074300--Sobic010G147100 Sobic004G118200 Sobic004G118200 Sobic010G074300--Sobic004G118200 Sobic007G190000 Sobic007G190000 Sobic010G074300--Sobic007G190000 Sobic010G074300--Sobic001G080700 Sobic002G311100 Sobic002G311100 Sobic010G074300--Sobic002G311100 Sobic010G131900 Sobic010G131900 Sobic010G074300--Sobic010G131900 Sobic009G074400 Sobic009G074400 Sobic010G074300--Sobic009G074400 Sobic003G316500 Sobic003G316500 Sobic010G074300--Sobic003G316500 Sobic001G268200 Sobic001G268200 Sobic010G074300--Sobic001G268200 Sobic005G160400 Sobic005G160400 Sobic001G539500--Sobic005G160400 Sobic010G265300 Sobic010G265300 Sobic001G539500--Sobic010G265300 Sobic006G096900 Sobic006G096900 Sobic001G539500--Sobic006G096900 Sobic001G539500--Sobic001G080700 Sobic007G084100 Sobic007G084100 Sobic001G539500--Sobic007G084100 Sobic007G009700 Sobic007G009700 Sobic001G539500--Sobic007G009700 Sobic004G353800 Sobic004G353800 Sobic001G539500--Sobic004G353800 Sobic007G052300 Sobic007G052300 Sobic001G539500--Sobic007G052300 Sobic010G021500 Sobic010G021500 Sobic001G539500--Sobic010G021500 Sobic009G084000 Sobic009G084000 Sobic003G220800--Sobic009G084000 Sobic001G100900 Sobic001G100900 Sobic003G220800--Sobic001G100900 Sobic003G043300 Sobic003G043300 Sobic003G220800--Sobic003G043300 Sobic003G220800--Sobic010G074300 Sobic001G241100 Sobic001G241100 Sobic003G220800--Sobic001G241100 Sobic002G359400 Sobic002G359400 Sobic003G220800--Sobic002G359400 Sobic003G220800--Sobic002G047700 Sobic006G092400 Sobic006G092400 Sobic003G220800--Sobic006G092400 Sobic010G147000 Sobic010G147000 Sobic003G220800--Sobic010G147000 Sobic003G176000 Sobic003G176000 Sobic004G131800--Sobic003G176000 Sobic002G211800 Sobic002G211800 Sobic004G131800--Sobic002G211800 Sobic002G170200 Sobic002G170200 Sobic004G131800--Sobic002G170200 Sobic006G127600 Sobic006G127600 Sobic004G131800--Sobic006G127600 Sobic010G032900 Sobic010G032900 Sobic004G131800--Sobic010G032900 Sobic002G344000 Sobic002G344000 Sobic004G131800--Sobic002G344000 Sobic006G056700 Sobic006G056700 Sobic004G131800--Sobic006G056700 Sobic001G178300 Sobic001G178300 Sobic004G131800--Sobic001G178300 Sobic002G294800 Sobic002G294800 Sobic004G131800--Sobic002G294800 Sobic008G070800--Sobic001G080700 Sobic008G070800--Sobic001G392300 Sobic006G185100 Sobic006G185100 Sobic008G070800--Sobic006G185100 Sobic005G059800 Sobic005G059800 Sobic008G070800--Sobic005G059800 Sobic001G151100 Sobic001G151100 Sobic008G070800--Sobic001G151100 Sobic008G070800--Sobic002G047700 Sobic008G070800--Sobic002G294800 Sobic001G333100 Sobic001G333100 Sobic008G070800--Sobic001G333100 Sobic002G383800 Sobic002G383800 Sobic008G070800--Sobic002G383800 Sobic001G392300--Sobic001G080700 Sobic007G061000 Sobic007G061000 Sobic001G392300--Sobic007G061000 Sobic009G177500 Sobic009G177500 Sobic001G392300--Sobic009G177500 Sobic004G353200 Sobic004G353200 Sobic001G392300--Sobic004G353200 Sobic001G392300--Sobic001G007000 Sobic007G075900 Sobic007G075900 Sobic001G392300--Sobic007G075900 Sobic009G044800 Sobic009G044800 Sobic001G392300--Sobic009G044800 Sobic008G047800 Sobic008G047800 Sobic001G392300--Sobic008G047800 Sobic006G200600 Sobic006G200600 Sobic001G392300--Sobic006G200600 Sobic001G332500--Sobic001G080700 Sobic001G122832 Sobic001G122832 Sobic001G332500--Sobic001G122832 Sobic003G253600 Sobic003G253600 Sobic001G332500--Sobic003G253600 Sobic001G375700 Sobic001G375700 Sobic001G332500--Sobic001G375700 Sobic001G332500--Sobic001G392300 Sobic003G221900 Sobic003G221900 Sobic001G332500--Sobic003G221900 Sobic007G136800 Sobic007G136800 Sobic001G332500--Sobic007G136800 Sobic003G398700 Sobic003G398700 Sobic001G332500--Sobic003G398700 Sobic001G332500--Sobic006G185100
Octagon: transcription factors


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