Gene annotation
Transcriptome id Sobic.004G353800.1
Synonym Sb04g038050
Functional annotation expressed protein
UniProt A0A194YT34
Pfam -
Panther DB PTHR13466 PTHR13466:SF6
NCBI CDD KOG2238; Uncharacterized conserved protein TEX2, contains PH domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17820 : Putative integral membrane protein conserved region (DUF2404)
RAP-DB (Rice) LOC_Os02g58110.1 : expressed protein
MaizeGDB (Corn) Zm00025a032732
Brachypodium KQK01564
Barley HORVU6Hr1G093660.1 , HORVU6Hr1G093660.3 , HORVU6Hr1G093660.4 , HORVU6Hr1G093660.5 , HORVU6Hr1G093660.6
Wheat TraesCS6D02G394800 , TraesCS6B02G460100 , TraesCS6A02G412100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G539500 SKP1, putative, expressed -
2 Sobic.006G185100 ranBP1 domain containing protein, expressed K14295: NUP50, nuclear pore complex protein Nup50
3 Sobic.007G052300 expressed protein -
4 Sobic.002G121600 myb-like DNA-binding domain containing protein, expressed -
5 Sobic.001G178600 metal ion binding protein, putative, expressed -
6 Sobic.005G100700 mRNA-capping enzyme, putative, expressed -
7 Sobic.007G009700 nucleic acid binding protein, putative, expressed K12839: SMNDC1, survival of motor neuron-related-splicing factor 30
8 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
9 Sobic.010G237900 RNA recognition motif containing protein, putative, expressed -
10 Sobic.006G096900 expressed protein -
11 Sobic.005G014300 expressed protein -
12 Sobic.001G026200 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
13 Sobic.001G332500 WRKY81, expressed -
14 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
15 Sobic.008G124700 splicing factor, arginine/serine-rich 18, putative, expressed -
16 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
17 Sobic.004G131800 sirohydrochlorin ferrochelatase, putative, expressed -
18 Sobic.002G252800 OsFBX332 - F-box domain containing protein, expressed -
19 Sobic.001G025000 FACT complex subunit SPT16, putative, expressed -
20 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic004G353800 Sobic004G353800 Sobic001G539500 Sobic001G539500 Sobic004G353800--Sobic001G539500 Sobic006G185100 Sobic006G185100 Sobic004G353800--Sobic006G185100 Sobic007G052300 Sobic007G052300 Sobic004G353800--Sobic007G052300 Sobic002G121600 Sobic002G121600 Sobic004G353800--Sobic002G121600 Sobic001G178600 Sobic001G178600 Sobic004G353800--Sobic001G178600 Sobic005G100700 Sobic005G100700 Sobic004G353800--Sobic005G100700 Sobic007G009700 Sobic007G009700 Sobic004G353800--Sobic007G009700 Sobic009G044800 Sobic009G044800 Sobic004G353800--Sobic009G044800 Sobic010G237900 Sobic010G237900 Sobic004G353800--Sobic010G237900 Sobic005G160400 Sobic005G160400 Sobic001G539500--Sobic005G160400 Sobic010G265300 Sobic010G265300 Sobic001G539500--Sobic010G265300 Sobic006G096900 Sobic006G096900 Sobic001G539500--Sobic006G096900 Sobic001G080700 Sobic001G080700 Sobic001G539500--Sobic001G080700 Sobic007G084100 Sobic007G084100 Sobic001G539500--Sobic007G084100 Sobic001G539500--Sobic007G009700 Sobic001G539500--Sobic004G353800 Sobic001G539500--Sobic007G052300 Sobic010G021500 Sobic010G021500 Sobic001G539500--Sobic010G021500 Sobic002G325300 Sobic002G325300 Sobic006G185100--Sobic002G325300 Sobic003G253600 Sobic003G253600 Sobic006G185100--Sobic003G253600 Sobic002G257750 Sobic002G257750 Sobic006G185100--Sobic002G257750 Sobic004G140600 Sobic004G140600 Sobic006G185100--Sobic004G140600 Sobic001G392300 Sobic001G392300 Sobic006G185100--Sobic001G392300 Sobic005G059800 Sobic005G059800 Sobic006G185100--Sobic005G059800 Sobic003G119600 Sobic003G119600 Sobic006G185100--Sobic003G119600 Sobic006G185100--Sobic001G080700 Sobic008G070800 Sobic008G070800 Sobic006G185100--Sobic008G070800 Sobic007G052300--Sobic001G080700 Sobic007G052300--Sobic007G009700 Sobic001G332500 Sobic001G332500 Sobic007G052300--Sobic001G332500 Sobic003G264200 Sobic003G264200 Sobic007G052300--Sobic003G264200 Sobic003G352200 Sobic003G352200 Sobic007G052300--Sobic003G352200 Sobic007G052300--Sobic003G253600 Sobic010G074300 Sobic010G074300 Sobic007G052300--Sobic010G074300 Sobic003G316500 Sobic003G316500 Sobic007G052300--Sobic003G316500 Sobic009G222500 Sobic009G222500 Sobic007G052300--Sobic009G222500 Sobic001G356500 Sobic001G356500 Sobic002G121600--Sobic001G356500 Sobic009G191100 Sobic009G191100 Sobic002G121600--Sobic009G191100 Sobic002G133400 Sobic002G133400 Sobic002G121600--Sobic002G133400 Sobic003G148000 Sobic003G148000 Sobic002G121600--Sobic003G148000 Sobic002G343901 Sobic002G343901 Sobic002G121600--Sobic002G343901 Sobic001G456900 Sobic001G456900 Sobic002G121600--Sobic001G456900 Sobic003G332800 Sobic003G332800 Sobic002G121600--Sobic003G332800 Sobic007G065400 Sobic007G065400 Sobic002G121600--Sobic007G065400 Sobic008G113100 Sobic008G113100 Sobic002G121600--Sobic008G113100 Sobic005G207500 Sobic005G207500 Sobic001G178600--Sobic005G207500 Sobic002G153700 Sobic002G153700 Sobic001G178600--Sobic002G153700 Sobic010G069100 Sobic010G069100 Sobic001G178600--Sobic010G069100 Sobic007G146900 Sobic007G146900 Sobic001G178600--Sobic007G146900 Sobic002G353600 Sobic002G353600 Sobic001G178600--Sobic002G353600 Sobic001G026200 Sobic001G026200 Sobic001G178600--Sobic001G026200 Sobic001G088100 Sobic001G088100 Sobic001G178600--Sobic001G088100 Sobic007G159900 Sobic007G159900 Sobic001G178600--Sobic007G159900 Sobic001G178600--Sobic008G113100 Sobic003G360400 Sobic003G360400 Sobic005G100700--Sobic003G360400 Sobic002G344000 Sobic002G344000 Sobic005G100700--Sobic002G344000 Sobic005G100700--Sobic007G159900 Sobic003G389200 Sobic003G389200 Sobic005G100700--Sobic003G389200 Sobic005G100700--Sobic008G113100 Sobic007G146100 Sobic007G146100 Sobic005G100700--Sobic007G146100 Sobic005G100700--Sobic006G096900 Sobic001G456300 Sobic001G456300 Sobic005G100700--Sobic001G456300 Sobic010G112100 Sobic010G112100 Sobic005G100700--Sobic010G112100 Sobic007G009700--Sobic009G044800 Sobic007G009700--Sobic001G088100 Sobic001G227400 Sobic001G227400 Sobic007G009700--Sobic001G227400 Sobic001G473600 Sobic001G473600 Sobic007G009700--Sobic001G473600 Sobic007G009700--Sobic006G096900 Sobic007G009700--Sobic003G360400 Sobic007G009700--Sobic003G352200 Sobic001G025000 Sobic001G025000 Sobic007G009700--Sobic001G025000 Sobic003G379200 Sobic003G379200 Sobic007G009700--Sobic003G379200 Sobic009G044800--Sobic003G360400 Sobic009G044800--Sobic003G352200 Sobic009G044800--Sobic001G227400 Sobic002G045600 Sobic002G045600 Sobic009G044800--Sobic002G045600 Sobic010G116600 Sobic010G116600 Sobic009G044800--Sobic010G116600 Sobic007G218000 Sobic007G218000 Sobic009G044800--Sobic007G218000 Sobic009G044800--Sobic001G025000 Sobic001G433800 Sobic001G433800 Sobic009G044800--Sobic001G433800 Sobic007G183900 Sobic007G183900 Sobic009G044800--Sobic007G183900 Sobic004G129300 Sobic004G129300 Sobic010G237900--Sobic004G129300 Sobic007G191700 Sobic007G191700 Sobic010G237900--Sobic007G191700 Sobic001G002600 Sobic001G002600 Sobic010G237900--Sobic001G002600 Sobic010G237900--Sobic007G084100 Sobic002G425500 Sobic002G425500 Sobic010G237900--Sobic002G425500 Sobic006G014100 Sobic006G014100 Sobic010G237900--Sobic006G014100 Sobic003G121300 Sobic003G121300 Sobic010G237900--Sobic003G121300 Sobic004G156800 Sobic004G156800 Sobic010G237900--Sobic004G156800 Sobic010G145800 Sobic010G145800 Sobic010G237900--Sobic010G145800
Octagon: transcription factors


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