Gene annotation
Transcriptome id Sobic.003G301000.1
Synonym Sb03g035020
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
SGS domain containing protein, expressed
UniProt C5XKR7
Pfam PF09032 PF04969
Panther DB PTHR13164
NCBI CDD KOG3260; Calcyclin-binding protein CacyBP
KEGG Orthology K04507; CACYBP, calcyclin binding protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G30070 : SGS domain-containing protein
RAP-DB (Rice) LOC_Os01g55270.1 : SGS domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040016 , Zm00025a027516
Brachypodium -
Barley HORVU3Hr1G072900.9 , HORVU3Hr1G072900.8 , HORVU3Hr1G072900.1 , HORVU3Hr1G072900.3 , HORVU3Hr1G072900.2 , HORVU3Hr1G072900.5 , HORVU3Hr1G072900.4 , HORVU3Hr1G072900.7 , HORVU3Hr1G072900.6
Wheat TraesCS3D02G294300 , TraesCS3B02G329100 , TraesCS3A02G294500
Populus -


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cDNA sequences
Sobic.003G301000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G104900 B12D protein, putative, expressed -
2 Sobic.003G387000 expressed protein -
3 Sobic.001G097600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@"salidroside biosynthesis, ethanol degradation II, phytol degradation"(PubMedID : 21853065)@dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
4 Sobic.006G148000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.006G231332 - -
6 Sobic.009G183300 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
7 Sobic.007G155200 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
8 Sobic.009G217000 chaperone protein dnaJ 10, putative, expressed -
9 Sobic.010G065900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@formin-like protein 13, putative, expressed -
10 Sobic.003G094200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alanyl-tRNA synthetase, putative, expressed -
11 Sobic.006G194000 DUF581 domain containing protein, expressed -
12 Sobic.009G169000 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01568: PDC, pyruvate decarboxylase
13 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
14 Sobic.001G437000 ACT domain containing protein, expressed -
15 Sobic.001G426000 Up-reguralion under heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
16 Sobic.004G283500 MATE domain containing protein, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
17 Sobic.009G255500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
18 Sobic.004G318100 adenylate kinase, putative, expressed K13800: CMPK1, UMP-CMP kinase
19 Sobic.003G357100 phosphatidic acid phosphatase-related, putative, expressed -
20 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic003G301000 Sobic003G301000 Sobic002G104900 Sobic002G104900 Sobic003G301000--Sobic002G104900 Sobic003G387000 Sobic003G387000 Sobic003G301000--Sobic003G387000 Sobic001G097600 Sobic001G097600 Sobic003G301000--Sobic001G097600 Sobic006G148000 Sobic006G148000 Sobic003G301000--Sobic006G148000 Sobic006G231332 Sobic006G231332 Sobic003G301000--Sobic006G231332 Sobic009G183300 Sobic009G183300 Sobic003G301000--Sobic009G183300 Sobic007G155200 Sobic007G155200 Sobic003G301000--Sobic007G155200 Sobic009G217000 Sobic009G217000 Sobic003G301000--Sobic009G217000 Sobic010G065900 Sobic010G065900 Sobic003G301000--Sobic010G065900 Sobic001G317000 Sobic001G317000 Sobic002G104900--Sobic001G317000 Sobic007G145600 Sobic007G145600 Sobic002G104900--Sobic007G145600 Sobic010G178500 Sobic010G178500 Sobic002G104900--Sobic010G178500 Sobic001G015100 Sobic001G015100 Sobic002G104900--Sobic001G015100 Sobic009G141800 Sobic009G141800 Sobic002G104900--Sobic009G141800 Sobic002G140400 Sobic002G140400 Sobic002G104900--Sobic002G140400 Sobic004G088551 Sobic004G088551 Sobic002G104900--Sobic004G088551 Sobic003G094200 Sobic003G094200 Sobic002G104900--Sobic003G094200 Sobic002G263400 Sobic002G263400 Sobic002G104900--Sobic002G263400 Sobic003G334600 Sobic003G334600 Sobic003G387000--Sobic003G334600 Sobic004G280200 Sobic004G280200 Sobic003G387000--Sobic004G280200 Sobic001G405500 Sobic001G405500 Sobic003G387000--Sobic001G405500 Sobic003G387000--Sobic009G183300 Sobic001G320900 Sobic001G320900 Sobic003G387000--Sobic001G320900 Sobic003G387000--Sobic009G141800 Sobic005G103300 Sobic005G103300 Sobic003G387000--Sobic005G103300 Sobic003G393900 Sobic003G393900 Sobic003G387000--Sobic003G393900 Sobic003G369100 Sobic003G369100 Sobic003G387000--Sobic003G369100 Sobic009G183400 Sobic009G183400 Sobic001G097600--Sobic009G183400 Sobic006G275200 Sobic006G275200 Sobic001G097600--Sobic006G275200 Sobic002G414600 Sobic002G414600 Sobic001G097600--Sobic002G414600 Sobic001G097600--Sobic001G317000 Sobic003G367200 Sobic003G367200 Sobic001G097600--Sobic003G367200 Sobic001G038900 Sobic001G038900 Sobic001G097600--Sobic001G038900 Sobic001G119400 Sobic001G119400 Sobic001G097600--Sobic001G119400 Sobic004G216600 Sobic004G216600 Sobic001G097600--Sobic004G216600 Sobic008G136400 Sobic008G136400 Sobic001G097600--Sobic008G136400 Sobic009G200700 Sobic009G200700 Sobic006G148000--Sobic009G200700 Sobic006G267000 Sobic006G267000 Sobic006G148000--Sobic006G267000 Sobic003G430400 Sobic003G430400 Sobic006G148000--Sobic003G430400 Sobic002G140300 Sobic002G140300 Sobic006G148000--Sobic002G140300 Sobic006G179500 Sobic006G179500 Sobic006G148000--Sobic006G179500 Sobic004G283500 Sobic004G283500 Sobic006G148000--Sobic004G283500 Sobic001G040200 Sobic001G040200 Sobic006G148000--Sobic001G040200 Sobic002G359300 Sobic002G359300 Sobic006G148000--Sobic002G359300 Sobic006G148000--Sobic001G320900 Sobic010G234600 Sobic010G234600 Sobic006G231332--Sobic010G234600 Sobic002G415600 Sobic002G415600 Sobic006G231332--Sobic002G415600 Sobic006G231100 Sobic006G231100 Sobic006G231332--Sobic006G231100 Sobic006G231200 Sobic006G231200 Sobic006G231332--Sobic006G231200 Sobic008G177800 Sobic008G177800 Sobic006G231332--Sobic008G177800 Sobic010G217800 Sobic010G217800 Sobic006G231332--Sobic010G217800 Sobic009G111200 Sobic009G111200 Sobic006G231332--Sobic009G111200 Sobic006G230900 Sobic006G230900 Sobic006G231332--Sobic006G230900 Sobic001G424200 Sobic001G424200 Sobic006G231332--Sobic001G424200 Sobic004G065500 Sobic004G065500 Sobic009G183300--Sobic004G065500 Sobic009G183300--Sobic003G387000 Sobic010G086200 Sobic010G086200 Sobic009G183300--Sobic010G086200 Sobic007G107850 Sobic007G107850 Sobic009G183300--Sobic007G107850 Sobic009G129000 Sobic009G129000 Sobic009G183300--Sobic009G129000 Sobic009G183300--Sobic006G231100 Sobic006G267200 Sobic006G267200 Sobic009G183300--Sobic006G267200 Sobic009G183300--Sobic006G231200 Sobic009G183300--Sobic008G177800 Sobic009G224100 Sobic009G224100 Sobic007G155200--Sobic009G224100 Sobic002G184200 Sobic002G184200 Sobic007G155200--Sobic002G184200 Sobic005G045900 Sobic005G045900 Sobic007G155200--Sobic005G045900 Sobic007G155200--Sobic002G140400 Sobic004G037000 Sobic004G037000 Sobic007G155200--Sobic004G037000 Sobic010G196600 Sobic010G196600 Sobic007G155200--Sobic010G196600 Sobic004G228500 Sobic004G228500 Sobic007G155200--Sobic004G228500 Sobic003G349600 Sobic003G349600 Sobic007G155200--Sobic003G349600 Sobic002G139400 Sobic002G139400 Sobic007G155200--Sobic002G139400 Sobic004G036600 Sobic004G036600 Sobic009G217000--Sobic004G036600 Sobic009G217000--Sobic003G094200 Sobic003G310700 Sobic003G310700 Sobic009G217000--Sobic003G310700 Sobic009G217000--Sobic010G065900 Sobic006G131400 Sobic006G131400 Sobic009G217000--Sobic006G131400 Sobic009G217000--Sobic004G065500 Sobic009G217000--Sobic009G141800 Sobic005G028700 Sobic005G028700 Sobic009G217000--Sobic005G028700 Sobic009G217000--Sobic006G267200 Sobic010G028200 Sobic010G028200 Sobic010G065900--Sobic010G028200 Sobic001G173300 Sobic001G173300 Sobic010G065900--Sobic001G173300 Sobic002G393400 Sobic002G393400 Sobic010G065900--Sobic002G393400 Sobic010G065900--Sobic009G141800 Sobic001G516600 Sobic001G516600 Sobic010G065900--Sobic001G516600 Sobic003G209000 Sobic003G209000 Sobic010G065900--Sobic003G209000 Sobic004G318100 Sobic004G318100 Sobic010G065900--Sobic004G318100 Sobic003G160700 Sobic003G160700 Sobic010G065900--Sobic003G160700 Sobic001G322200 Sobic001G322200 Sobic010G065900--Sobic001G322200
Octagon: transcription factors


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