Gene annotation
Transcriptome id Sobic.003G319600.1
Synonym RK3, Sb03g036650, ARK3
Functional annotation serine/threonine-protein kinase receptor precursor, putative, expressed
UniProt C5XLS4
Pfam PF11883 PF08276 PF01453 PF00954 PF07714
Panther DB PTHR27002 PTHR27002:SF137
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0004674; protein serine/threonine kinase activity GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21380 : receptor kinase 3
RAP-DB (Rice) LOC_Os01g57560.1 : serine/threonine-protein kinase receptor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a009643 , Zm00025a037893 , Zm00025a027258 , Zm00025a039879
Brachypodium PNT73004 , PNT73003 , KQK10098 , KQK05544
Barley HORVU3Hr1G077130.3 , HORVU3Hr1G077130.2 , HORVU3Hr1G077130.1 , HORVU3Hr1G077130.6 , HORVU3Hr1G077130.5 , HORVU3Hr1G077130.4 , HORVU1Hr1G066190.15 , HORVU1Hr1G066190.16 , HORVU1Hr1G066190.11 , HORVU1Hr1G066190.10 , HORVU1Hr1G066190.13 , HORVU1Hr1G066190.12 , HORVU3Hr1G077220.18 , HORVU3Hr1G077220.17 , HORVU3Hr1G077220.16 , HORVU3Hr1G077220.15 , HORVU3Hr1G077220.14 , HORVU3Hr1G077220.13 , HORVU3Hr1G077220.12 , HORVU3Hr1G077220.11 , HORVU3Hr1G077220.10 , HORVU3Hr1G077220.6 , HORVU1Hr1G066190.1 , HORVU1Hr1G066190.3 , HORVU1Hr1G066190.2 , HORVU1Hr1G066190.5 , HORVU1Hr1G066190.6 , HORVU1Hr1G066190.9 , HORVU1Hr1G066190.8 , HORVU3Hr1G077220.7 , HORVU3Hr1G077220.5 , HORVU3Hr1G077220.4 , HORVU3Hr1G077220.3 , HORVU3Hr1G077220.2 , HORVU3Hr1G077220.1 , HORVU3Hr1G077220.9 , HORVU3Hr1G077220.8
Wheat TraesCS1B02G333300 , TraesCS1B02G333300 , TraesCS1B02G333300 , TraesCS1B02G333300 , TraesCS1B02G333300 , TraesCS3B02G351800 , TraesCS3D02G317300 , TraesCS3D02G317300 , TraesCS3D02G317300 , TraesCS3D02G317300 , TraesCS3D02G317300 , TraesCS3D02G317300 , TraesCS3D02G317300 , TraesCS3A02G323700 , TraesCS3A02G323700 , TraesCS3A02G323700 , TraesCS1D02G320800 , TraesCS1D02G320800 , TraesCS1D02G320800 , TraesCS1A02G320900 , TraesCS1A02G320900 , TraesCS3D02G118900 , TraesCS3B02G352900 , TraesCS3B02G352900 , TraesCS3B02G352900 , TraesCS3B02G352900 , TraesCS3A02G323400 , TraesCS3A02G323400 , TraesCS3A02G493300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G300200 expressed protein -
2 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
3 Sobic.001G019400 protein kinase family protein, putative, expressed -
4 Sobic.010G190400 ZOS6-05 - C2H2 zinc finger protein, expressed -
5 Sobic.008G110700 flavin monooxygenase, putative, expressed -
6 Sobic.001G434100 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
7 Sobic.007G065300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
8 Sobic.005G204100 kelch repeat protein, putative, expressed -
9 Sobic.002G348700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carboxyl-terminal peptidase, putative, expressed -
10 Sobic.004G255800 AGC_PVPK_like_kin82y.7 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
11 Sobic.001G393401 - -
12 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
13 Sobic.010G010900 expressed protein -
14 Sobic.003G096300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
15 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
16 Sobic.004G205500 expressed protein -
17 Sobic.006G262100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
18 Sobic.001G482300 3-ketoacyl-CoA synthase 10, putative, expressed K15397: 3-ketoacyl-CoA synthase
19 Sobic.008G136100 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
20 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -


Gene co-expression network
sample Sobic003G319600 Sobic003G319600 Sobic003G300200 Sobic003G300200 Sobic003G319600--Sobic003G300200 Sobic002G098500 Sobic002G098500 Sobic003G319600--Sobic002G098500 Sobic001G019400 Sobic001G019400 Sobic003G319600--Sobic001G019400 Sobic010G190400 Sobic010G190400 Sobic003G319600--Sobic010G190400 Sobic008G110700 Sobic008G110700 Sobic003G319600--Sobic008G110700 Sobic001G434100 Sobic001G434100 Sobic003G319600--Sobic001G434100 Sobic007G065300 Sobic007G065300 Sobic003G319600--Sobic007G065300 Sobic005G204100 Sobic005G204100 Sobic003G319600--Sobic005G204100 Sobic002G348700 Sobic002G348700 Sobic003G319600--Sobic002G348700 Sobic001G267800 Sobic001G267800 Sobic003G300200--Sobic001G267800 Sobic003G300200--Sobic001G434100 Sobic002G072700 Sobic002G072700 Sobic003G300200--Sobic002G072700 Sobic009G141300 Sobic009G141300 Sobic003G300200--Sobic009G141300 Sobic003G300200--Sobic005G204100 Sobic002G139800 Sobic002G139800 Sobic003G300200--Sobic002G139800 Sobic001G221900 Sobic001G221900 Sobic003G300200--Sobic001G221900 Sobic010G010900 Sobic010G010900 Sobic003G300200--Sobic010G010900 Sobic007G189400 Sobic007G189400 Sobic003G300200--Sobic007G189400 Sobic008G038200 Sobic008G038200 Sobic002G098500--Sobic008G038200 Sobic002G098500--Sobic007G065300 Sobic003G096300 Sobic003G096300 Sobic002G098500--Sobic003G096300 Sobic002G098500--Sobic005G204100 Sobic010G135300 Sobic010G135300 Sobic002G098500--Sobic010G135300 Sobic010G020600 Sobic010G020600 Sobic002G098500--Sobic010G020600 Sobic002G216600 Sobic002G216600 Sobic002G098500--Sobic002G216600 Sobic002G098500--Sobic001G221900 Sobic007G032100 Sobic007G032100 Sobic002G098500--Sobic007G032100 Sobic009G014400 Sobic009G014400 Sobic001G019400--Sobic009G014400 Sobic001G427300 Sobic001G427300 Sobic001G019400--Sobic001G427300 Sobic001G019400--Sobic003G319600 Sobic003G117700 Sobic003G117700 Sobic001G019400--Sobic003G117700 Sobic007G145200 Sobic007G145200 Sobic001G019400--Sobic007G145200 Sobic008G063000 Sobic008G063000 Sobic001G019400--Sobic008G063000 Sobic008G153600 Sobic008G153600 Sobic001G019400--Sobic008G153600 Sobic004G118700 Sobic004G118700 Sobic001G019400--Sobic004G118700 Sobic007G017400 Sobic007G017400 Sobic001G019400--Sobic007G017400 Sobic001G393401 Sobic001G393401 Sobic010G190400--Sobic001G393401 Sobic010G190400--Sobic008G038200 Sobic010G190400--Sobic007G065300 Sobic001G384700 Sobic001G384700 Sobic010G190400--Sobic001G384700 Sobic009G173200 Sobic009G173200 Sobic010G190400--Sobic009G173200 Sobic009G141700 Sobic009G141700 Sobic010G190400--Sobic009G141700 Sobic006G046600 Sobic006G046600 Sobic010G190400--Sobic006G046600 Sobic001G482300 Sobic001G482300 Sobic010G190400--Sobic001G482300 Sobic010G190400--Sobic005G204100 Sobic002G374600 Sobic002G374600 Sobic008G110700--Sobic002G374600 Sobic008G110700--Sobic003G319600 Sobic009G223500 Sobic009G223500 Sobic008G110700--Sobic009G223500 Sobic002G275200 Sobic002G275200 Sobic008G110700--Sobic002G275200 Sobic003G175800 Sobic003G175800 Sobic008G110700--Sobic003G175800 Sobic001G181100 Sobic001G181100 Sobic008G110700--Sobic001G181100 Sobic003G185600 Sobic003G185600 Sobic008G110700--Sobic003G185600 Sobic001G076400 Sobic001G076400 Sobic008G110700--Sobic001G076400 Sobic001G309900 Sobic001G309900 Sobic008G110700--Sobic001G309900 Sobic007G165800 Sobic007G165800 Sobic001G434100--Sobic007G165800 Sobic004G274600 Sobic004G274600 Sobic001G434100--Sobic004G274600 Sobic001G286700 Sobic001G286700 Sobic001G434100--Sobic001G286700 Sobic003G027100 Sobic003G027100 Sobic001G434100--Sobic003G027100 Sobic001G199400 Sobic001G199400 Sobic001G434100--Sobic001G199400 Sobic001G470200 Sobic001G470200 Sobic001G434100--Sobic001G470200 Sobic001G434100--Sobic007G032100 Sobic010G235300 Sobic010G235300 Sobic001G434100--Sobic010G235300 Sobic004G357000 Sobic004G357000 Sobic001G434100--Sobic004G357000 Sobic007G065300--Sobic008G038200 Sobic007G065300--Sobic007G032100 Sobic007G065300--Sobic007G165800 Sobic007G065300--Sobic002G098500 Sobic007G065300--Sobic001G434100 Sobic007G065300--Sobic010G020600 Sobic007G065300--Sobic001G221900 Sobic009G235700 Sobic009G235700 Sobic007G065300--Sobic009G235700 Sobic001G298800 Sobic001G298800 Sobic007G065300--Sobic001G298800 Sobic005G204100--Sobic002G216600 Sobic009G259500 Sobic009G259500 Sobic005G204100--Sobic009G259500 Sobic005G204100--Sobic002G072700 Sobic007G142900 Sobic007G142900 Sobic005G204100--Sobic007G142900 Sobic005G204100--Sobic002G098500 Sobic005G204100--Sobic001G221900 Sobic005G204100--Sobic001G384700 Sobic006G272500 Sobic006G272500 Sobic005G204100--Sobic006G272500 Sobic005G204100--Sobic007G189400 Sobic002G348700--Sobic002G216600 Sobic004G199700 Sobic004G199700 Sobic002G348700--Sobic004G199700 Sobic003G174900 Sobic003G174900 Sobic002G348700--Sobic003G174900 Sobic007G210900 Sobic007G210900 Sobic002G348700--Sobic007G210900 Sobic004G205500 Sobic004G205500 Sobic002G348700--Sobic004G205500 Sobic003G420800 Sobic003G420800 Sobic002G348700--Sobic003G420800 Sobic002G348700--Sobic009G259500 Sobic006G167300 Sobic006G167300 Sobic002G348700--Sobic006G167300 Sobic009G164900 Sobic009G164900 Sobic002G348700--Sobic009G164900
Octagon: transcription factors


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