Gene annotation
| Transcriptome id | Sobic.008G110700.1 |
|---|---|
| Synonym | YUC6, Sb08g016500 |
| Functional annotation | flavin monooxygenase, putative, expressed |
| UniProt | C5YP57 |
| Pfam | PF00743 |
| Panther DB | PTHR23023 PTHR23023:SF149 |
| NCBI CDD | KOG1399; Flavin-containing monooxygenase |
| KEGG Orthology | - |
| Gene Ontology | GO:0004499; N,N-dimethylaniline monooxygenase activity |
Orthologs (automatic annotation)
| TAIR | AT5G25620 : Flavin-binding monooxygenase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os12g32750.1 : flavin monooxygenase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a013581 , Zm00025a040643 , Zm00025a028256 |
| Brachypodium | KQJ86578 |
| Barley | HORVU5Hr1G125560.3 , HORVU5Hr1G125560.1 , HORVU5Hr1G028100.1 , HORVU5Hr1G028100.2 , HORVU7Hr1G013170.1 , HORVU7Hr1G013170.3 , HORVU7Hr1G013170.2 , HORVU5Hr1G050630.3 , HORVU5Hr1G050630.2 , HORVU5Hr1G125560.2 |
| Wheat | TraesCS5D02G114500 , TraesCS7A02G065600 , TraesCS4A02G313200 , TraesCS2B02G010100 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G374600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@3-oxoacyl-synthase, putative, expressed | K09458: fabF, OXSM, 3-oxoacyl-[acyl-carrier-protein] synthase II |
| 2 | Sobic.003G319600 | serine/threonine-protein kinase receptor precursor, putative, expressed | - |
| 3 | Sobic.009G223500 | -(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 4 | Sobic.002G275200 | PPR repeat containing protein, expressed | - |
| 5 | Sobic.003G175800 | - | - |
| 6 | Sobic.001G181100 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@SCARECROW, putative, expressed | - |
| 7 | Sobic.003G185600 | asp/Glu racemase, putative, expressed | - |
| 8 | Sobic.001G076400 | H-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed | - |
| 9 | Sobic.001G309900 | transporter, major facilitator family, putative, expressed | - |
| 10 | Sobic.002G138100 | ACT domain containing protein, expressed | - |
| 11 | Sobic.007G010800 | similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein | - |
| 12 | Sobic.005G132000 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed | - |
| 13 | Sobic.008G002400 | expressed protein | - |
| 14 | Sobic.001G220000 | PPR repeat containing protein, expressed | - |
| 15 | Sobic.004G154700 | choline/ethanolamine kinase, putative, expressed | - |
| 16 | Sobic.004G018700 | expressed protein | - |
| 17 | Sobic.005G002400 | expressed protein | - |
| 18 | Sobic.002G052100 | early light-induced protein, chloroplast precursor, putative, expressed | - |
| 19 | Sobic.001G181000 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
| 20 | Sobic.009G123300 | NAD dependent epimerase/dehydratase family protein, putative, expressed | K06118: SQD1, UDP-sulfoquinovose synthase |
Gene co-expression network
Octagon: transcription factors
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