Gene annotation
Transcriptome id Sobic.002G374600.1
Synonym FAB1, ATKAS2, Sb02g039230, KAS2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
3-oxoacyl-synthase, putative, expressed
UniProt C5XE14
Pfam PF02801 PF00109
Panther DB PTHR11712 PTHR11712:SF287
NCBI CDD -
KEGG Orthology K09458; fabF, OXSM, 3-oxoacyl-[acyl-carrier-protein] synthase II
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74960 : fatty acid biosynthesis 1
RAP-DB (Rice) LOC_Os07g42420.1 : 3-oxoacyl-synthase, putative, expressed
MaizeGDB (Corn) Zm00025a052151 , Zm00025a048760 , Zm00025a015213
Brachypodium KQK15130 , KQK21343
Barley HORVU2Hr1G030950.1 , HORVU2Hr1G030950.2 , HORVU2Hr1G030950.3
Wheat TraesCS2A02G168500 , TraesCS2A02G168500 , TraesCS2B02G194700 , TraesCS2D02G176000
Populus PNS92951 , PNS92950


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cDNA sequences
Sobic.002G374600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
2 Sobic.009G119300 peptide chain release factor 2, putative, expressed -
3 Sobic.009G231800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf"(PubMedID : 20499123)@auxin response factor 15, putative, expressed K14486: K14486, auxin response factor
4 Sobic.009G245000 Glucose-1-phosphate adenylyltransferase large subunit(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
5 Sobic.003G304300 expressed protein -
6 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
7 Sobic.001G309900 transporter, major facilitator family, putative, expressed -
8 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
9 Sobic.008G110700 flavin monooxygenase, putative, expressed -
10 Sobic.003G185600 asp/Glu racemase, putative, expressed -
11 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
12 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G338800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
14 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
15 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.007G010800 similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein -
17 Sobic.007G016600 expressed protein -
18 Sobic.002G047400 "protein containing PDZ domain, a K-box domain, and a TPR region"(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SHOOT1 protein, putative, expressed -
19 Sobic.001G076400 H-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
20 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G374600 Sobic002G374600 Sobic003G186800 Sobic003G186800 Sobic002G374600--Sobic003G186800 Sobic009G119300 Sobic009G119300 Sobic002G374600--Sobic009G119300 Sobic009G231800 Sobic009G231800 Sobic002G374600--Sobic009G231800 Sobic009G245000 Sobic009G245000 Sobic002G374600--Sobic009G245000 Sobic003G304300 Sobic003G304300 Sobic002G374600--Sobic003G304300 Sobic001G018000 Sobic001G018000 Sobic002G374600--Sobic001G018000 Sobic001G309900 Sobic001G309900 Sobic002G374600--Sobic001G309900 Sobic004G268400 Sobic004G268400 Sobic002G374600--Sobic004G268400 Sobic008G110700 Sobic008G110700 Sobic002G374600--Sobic008G110700 Sobic003G380200 Sobic003G380200 Sobic003G186800--Sobic003G380200 Sobic003G186800--Sobic003G304300 Sobic009G225600 Sobic009G225600 Sobic003G186800--Sobic009G225600 Sobic006G191500 Sobic006G191500 Sobic003G186800--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic003G186800--Sobic001G485100 Sobic010G101000 Sobic010G101000 Sobic003G186800--Sobic010G101000 Sobic003G186800--Sobic004G268400 Sobic002G047400 Sobic002G047400 Sobic003G186800--Sobic002G047400 Sobic004G267700 Sobic004G267700 Sobic003G186800--Sobic004G267700 Sobic008G088821 Sobic008G088821 Sobic009G119300--Sobic008G088821 Sobic001G015200 Sobic001G015200 Sobic009G119300--Sobic001G015200 Sobic009G119300--Sobic010G101000 Sobic006G140500 Sobic006G140500 Sobic009G119300--Sobic006G140500 Sobic009G119300--Sobic003G186800 Sobic009G119300--Sobic004G268400 Sobic009G119300--Sobic001G018000 Sobic003G103300 Sobic003G103300 Sobic009G119300--Sobic003G103300 Sobic009G119300--Sobic004G267700 Sobic005G132000 Sobic005G132000 Sobic009G231800--Sobic005G132000 Sobic009G259100 Sobic009G259100 Sobic009G231800--Sobic009G259100 Sobic009G231800--Sobic003G186800 Sobic007G121300 Sobic007G121300 Sobic009G231800--Sobic007G121300 Sobic009G231800--Sobic001G485100 Sobic001G276300 Sobic001G276300 Sobic009G231800--Sobic001G276300 Sobic004G344600 Sobic004G344600 Sobic009G231800--Sobic004G344600 Sobic001G331600 Sobic001G331600 Sobic009G231800--Sobic001G331600 Sobic002G295100 Sobic002G295100 Sobic009G231800--Sobic002G295100 Sobic002G338800 Sobic002G338800 Sobic009G245000--Sobic002G338800 Sobic005G002400 Sobic005G002400 Sobic009G245000--Sobic005G002400 Sobic003G326000 Sobic003G326000 Sobic009G245000--Sobic003G326000 Sobic008G002400 Sobic008G002400 Sobic009G245000--Sobic008G002400 Sobic002G213400 Sobic002G213400 Sobic009G245000--Sobic002G213400 Sobic001G104900 Sobic001G104900 Sobic009G245000--Sobic001G104900 Sobic009G245000--Sobic001G018000 Sobic002G052000 Sobic002G052000 Sobic009G245000--Sobic002G052000 Sobic006G020300 Sobic006G020300 Sobic009G245000--Sobic006G020300 Sobic003G304300--Sobic004G267700 Sobic003G304300--Sobic006G191500 Sobic002G351200 Sobic002G351200 Sobic003G304300--Sobic002G351200 Sobic002G161400 Sobic002G161400 Sobic003G304300--Sobic002G161400 Sobic003G304300--Sobic004G344600 Sobic001G112900 Sobic001G112900 Sobic003G304300--Sobic001G112900 Sobic003G304300--Sobic003G186800 Sobic003G304300--Sobic003G380200 Sobic003G304300--Sobic004G268400 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic007G016600 Sobic007G016600 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G411100 Sobic001G411100 Sobic001G018000--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic001G309900--Sobic006G020300 Sobic003G175800 Sobic003G175800 Sobic001G309900--Sobic003G175800 Sobic001G309900--Sobic010G101000 Sobic001G309900--Sobic001G018000 Sobic001G309900--Sobic002G030900 Sobic001G104700 Sobic001G104700 Sobic001G309900--Sobic001G104700 Sobic001G309900--Sobic004G267700 Sobic001G309900--Sobic008G088821 Sobic001G309900--Sobic009G225600 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic004G268400--Sobic003G380200 Sobic008G110700--Sobic002G374600 Sobic003G319600 Sobic003G319600 Sobic008G110700--Sobic003G319600 Sobic009G223500 Sobic009G223500 Sobic008G110700--Sobic009G223500 Sobic002G275200 Sobic002G275200 Sobic008G110700--Sobic002G275200 Sobic008G110700--Sobic003G175800 Sobic001G181100 Sobic001G181100 Sobic008G110700--Sobic001G181100 Sobic003G185600 Sobic003G185600 Sobic008G110700--Sobic003G185600 Sobic001G076400 Sobic001G076400 Sobic008G110700--Sobic001G076400 Sobic008G110700--Sobic001G309900
Octagon: transcription factors


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