Gene annotation
Transcriptome id Sobic.001G076400.1,Sobic.001G076400.2,Sobic.001G076400.3
Synonym Sb01g006900
Functional annotation H-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed
UniProt A0A1B6QHS6
Pfam -
Panther DB PTHR31060 PTHR31060:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50780 : -
RAP-DB (Rice) LOC_Os03g55950.2,LOC_Os03g55950.4 : H-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed
MaizeGDB (Corn) Zm00025a008330
Brachypodium KQK13001 , KQK20909
Barley HORVU5Hr1G098300.1
Wheat TraesCS5A02G404600 , TraesCS5D02G414700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G261545 - K01669: deoxyribodipyrimidine photo-lyase
2 Sobic.009G103000 ubiquitin family protein, putative, expressed -
3 Sobic.007G010800 similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein -
4 Sobic.002G138100 ACT domain containing protein, expressed -
5 Sobic.005G132000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
6 Sobic.006G233700 PolI-like DNA polymerase, putative, expressed K02335: DNA polymerase I
7 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
8 Sobic.003G003450 - K01177: beta-amylase
9 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
10 Sobic.002G356900 threonyl-tRNA synthetase, putative, expressed K01868: TARS, threonyl-tRNA synthetase
11 Sobic.006G089500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 9, putative, expressed K14486: K14486, auxin response factor
12 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
13 Sobic.006G213700 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed K13237: peroxisomal 2,4-dienoyl-CoA reductase
14 Sobic.003G185600 asp/Glu racemase, putative, expressed -
15 Sobic.002G028400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
16 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
17 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
18 Sobic.007G087100 pentatricopeptide, putative, expressed -
19 Sobic.006G142600 lipase class 3 family protein, putative, expressed -
20 Sobic.003G409700 rieske domain containing protein, expressed -


Gene co-expression network
sample Sobic001G076400 Sobic001G076400 Sobic001G261545 Sobic001G261545 Sobic001G076400--Sobic001G261545 Sobic009G103000 Sobic009G103000 Sobic001G076400--Sobic009G103000 Sobic007G010800 Sobic007G010800 Sobic001G076400--Sobic007G010800 Sobic002G138100 Sobic002G138100 Sobic001G076400--Sobic002G138100 Sobic005G132000 Sobic005G132000 Sobic001G076400--Sobic005G132000 Sobic006G233700 Sobic006G233700 Sobic001G076400--Sobic006G233700 Sobic008G077500 Sobic008G077500 Sobic001G076400--Sobic008G077500 Sobic003G003450 Sobic003G003450 Sobic001G076400--Sobic003G003450 Sobic006G232600 Sobic006G232600 Sobic001G076400--Sobic006G232600 Sobic007G136200 Sobic007G136200 Sobic001G261545--Sobic007G136200 Sobic010G171600 Sobic010G171600 Sobic001G261545--Sobic010G171600 Sobic005G100600 Sobic005G100600 Sobic001G261545--Sobic005G100600 Sobic001G261545--Sobic009G103000 Sobic003G264800 Sobic003G264800 Sobic001G261545--Sobic003G264800 Sobic007G058001 Sobic007G058001 Sobic001G261545--Sobic007G058001 Sobic001G085600 Sobic001G085600 Sobic001G261545--Sobic001G085600 Sobic001G261545--Sobic006G232600 Sobic001G436400 Sobic001G436400 Sobic001G261545--Sobic001G436400 Sobic007G087100 Sobic007G087100 Sobic009G103000--Sobic007G087100 Sobic001G077300 Sobic001G077300 Sobic009G103000--Sobic001G077300 Sobic009G170200 Sobic009G170200 Sobic009G103000--Sobic009G170200 Sobic009G073900 Sobic009G073900 Sobic009G103000--Sobic009G073900 Sobic009G103000--Sobic003G003450 Sobic009G103000--Sobic006G232600 Sobic006G213700 Sobic006G213700 Sobic009G103000--Sobic006G213700 Sobic001G378100 Sobic001G378100 Sobic009G103000--Sobic001G378100 Sobic006G212800 Sobic006G212800 Sobic009G103000--Sobic006G212800 Sobic002G356900 Sobic002G356900 Sobic007G010800--Sobic002G356900 Sobic001G018000 Sobic001G018000 Sobic007G010800--Sobic001G018000 Sobic010G100900 Sobic010G100900 Sobic007G010800--Sobic010G100900 Sobic009G040400 Sobic009G040400 Sobic007G010800--Sobic009G040400 Sobic002G351200 Sobic002G351200 Sobic007G010800--Sobic002G351200 Sobic007G010800--Sobic003G003450 Sobic004G268400 Sobic004G268400 Sobic007G010800--Sobic004G268400 Sobic004G317700 Sobic004G317700 Sobic007G010800--Sobic004G317700 Sobic003G186800 Sobic003G186800 Sobic007G010800--Sobic003G186800 Sobic001G394800 Sobic001G394800 Sobic002G138100--Sobic001G394800 Sobic002G138100--Sobic007G010800 Sobic002G138100--Sobic009G040400 Sobic009G228100 Sobic009G228100 Sobic002G138100--Sobic009G228100 Sobic001G169900 Sobic001G169900 Sobic002G138100--Sobic001G169900 Sobic003G103300 Sobic003G103300 Sobic002G138100--Sobic003G103300 Sobic002G138100--Sobic003G003450 Sobic003G057233 Sobic003G057233 Sobic002G138100--Sobic003G057233 Sobic002G138100--Sobic002G356900 Sobic003G029500 Sobic003G029500 Sobic005G132000--Sobic003G029500 Sobic005G201000 Sobic005G201000 Sobic005G132000--Sobic005G201000 Sobic009G259100 Sobic009G259100 Sobic005G132000--Sobic009G259100 Sobic005G132000--Sobic009G040400 Sobic005G132000--Sobic007G010800 Sobic007G146400 Sobic007G146400 Sobic005G132000--Sobic007G146400 Sobic010G132600 Sobic010G132600 Sobic005G132000--Sobic010G132600 Sobic002G295100 Sobic002G295100 Sobic005G132000--Sobic002G295100 Sobic005G132000--Sobic003G003450 Sobic006G233700--Sobic006G232600 Sobic001G500600 Sobic001G500600 Sobic006G233700--Sobic001G500600 Sobic010G110400 Sobic010G110400 Sobic006G233700--Sobic010G110400 Sobic006G233700--Sobic009G170200 Sobic001G060500 Sobic001G060500 Sobic006G233700--Sobic001G060500 Sobic003G203300 Sobic003G203300 Sobic006G233700--Sobic003G203300 Sobic006G233700--Sobic010G171600 Sobic003G070900 Sobic003G070900 Sobic006G233700--Sobic003G070900 Sobic001G219700 Sobic001G219700 Sobic006G233700--Sobic001G219700 Sobic007G090900 Sobic007G090900 Sobic008G077500--Sobic007G090900 Sobic004G268300 Sobic004G268300 Sobic008G077500--Sobic004G268300 Sobic001G243200 Sobic001G243200 Sobic008G077500--Sobic001G243200 Sobic008G052900 Sobic008G052900 Sobic008G077500--Sobic008G052900 Sobic008G077500--Sobic009G103000 Sobic008G077500--Sobic006G212800 Sobic003G157900 Sobic003G157900 Sobic008G077500--Sobic003G157900 Sobic003G260100 Sobic003G260100 Sobic008G077500--Sobic003G260100 Sobic002G162400 Sobic002G162400 Sobic008G077500--Sobic002G162400 Sobic003G003450--Sobic009G073900 Sobic003G003450--Sobic001G077300 Sobic001G509200 Sobic001G509200 Sobic003G003450--Sobic001G509200 Sobic003G003450--Sobic006G213700 Sobic002G081400 Sobic002G081400 Sobic003G003450--Sobic002G081400 Sobic003G003450--Sobic006G232600 Sobic006G090100 Sobic006G090100 Sobic003G003450--Sobic006G090100 Sobic003G003450--Sobic007G087100 Sobic001G207800 Sobic001G207800 Sobic003G003450--Sobic001G207800 Sobic006G232600--Sobic009G170200 Sobic006G232600--Sobic007G087100 Sobic006G232600--Sobic003G003450 Sobic006G232600--Sobic001G378100 Sobic006G232600--Sobic009G073900 Sobic006G232600--Sobic006G233700 Sobic006G232600--Sobic009G103000 Sobic006G232600--Sobic001G077300 Sobic006G232600--Sobic002G081400
Octagon: transcription factors


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