Gene annotation
Transcriptome id Sobic.004G154700.1
Synonym
Functional annotation choline/ethanolamine kinase, putative, expressed
UniProt A0A194YPW5
Pfam -
Panther DB PTHR22603 PTHR22603:SF42
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g08760.1 : choline/ethanolamine kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G277400 violaxanthin de-epoxidase, putative, expressed -
2 Sobic.009G040400 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
3 Sobic.007G010800 similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein -
4 Sobic.005G132000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
5 Sobic.005G038500 pentatricopeptide containing protein, putative, expressed -
6 Sobic.003G011900 expressed protein -
7 Sobic.003G057233 - -
8 Sobic.003G105900 expressed protein -
9 Sobic.001G282800 AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
10 Sobic.001G060100 CK1_CaseinKinase_1a.4 - CK1 includes the casein kinase 1 kinases, expressed -
11 Sobic.005G201000 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
12 Sobic.001G220000 PPR repeat containing protein, expressed -
13 Sobic.010G132600 selenoprotein O, putative, expressed -
14 Sobic.002G138100 ACT domain containing protein, expressed -
15 Sobic.001G052800 FHA domain containing protein, putative, expressed -
16 Sobic.003G298200 dehydrogenase, putative, expressed -
17 Sobic.003G003450 - K01177: beta-amylase
18 Sobic.009G244700 dnaJ domain containing protein, expressed -
19 Sobic.001G394800 tetratricopeptide repeat domain containing protein, expressed -
20 Sobic.002G275200 PPR repeat containing protein, expressed -


Gene co-expression network
sample Sobic004G154700 Sobic004G154700 Sobic003G277400 Sobic003G277400 Sobic004G154700--Sobic003G277400 Sobic009G040400 Sobic009G040400 Sobic004G154700--Sobic009G040400 Sobic007G010800 Sobic007G010800 Sobic004G154700--Sobic007G010800 Sobic005G132000 Sobic005G132000 Sobic004G154700--Sobic005G132000 Sobic005G038500 Sobic005G038500 Sobic004G154700--Sobic005G038500 Sobic003G011900 Sobic003G011900 Sobic004G154700--Sobic003G011900 Sobic003G057233 Sobic003G057233 Sobic004G154700--Sobic003G057233 Sobic003G105900 Sobic003G105900 Sobic004G154700--Sobic003G105900 Sobic001G282800 Sobic001G282800 Sobic004G154700--Sobic001G282800 Sobic003G277400--Sobic007G010800 Sobic003G277400--Sobic009G040400 Sobic003G277400--Sobic004G154700 Sobic002G258400 Sobic002G258400 Sobic003G277400--Sobic002G258400 Sobic004G154800 Sobic004G154800 Sobic003G277400--Sobic004G154800 Sobic001G220000 Sobic001G220000 Sobic003G277400--Sobic001G220000 Sobic003G185600 Sobic003G185600 Sobic003G277400--Sobic003G185600 Sobic006G108200 Sobic006G108200 Sobic003G277400--Sobic006G108200 Sobic002G356900 Sobic002G356900 Sobic003G277400--Sobic002G356900 Sobic009G040400--Sobic007G010800 Sobic009G040400--Sobic005G132000 Sobic009G040400--Sobic003G105900 Sobic005G201000 Sobic005G201000 Sobic009G040400--Sobic005G201000 Sobic003G029500 Sobic003G029500 Sobic009G040400--Sobic003G029500 Sobic010G092350 Sobic010G092350 Sobic009G040400--Sobic010G092350 Sobic002G275200 Sobic002G275200 Sobic009G040400--Sobic002G275200 Sobic009G040400--Sobic002G356900 Sobic002G138100 Sobic002G138100 Sobic009G040400--Sobic002G138100 Sobic007G010800--Sobic002G356900 Sobic001G018000 Sobic001G018000 Sobic007G010800--Sobic001G018000 Sobic010G100900 Sobic010G100900 Sobic007G010800--Sobic010G100900 Sobic007G010800--Sobic009G040400 Sobic002G351200 Sobic002G351200 Sobic007G010800--Sobic002G351200 Sobic003G003450 Sobic003G003450 Sobic007G010800--Sobic003G003450 Sobic004G268400 Sobic004G268400 Sobic007G010800--Sobic004G268400 Sobic004G317700 Sobic004G317700 Sobic007G010800--Sobic004G317700 Sobic003G186800 Sobic003G186800 Sobic007G010800--Sobic003G186800 Sobic005G132000--Sobic003G029500 Sobic005G132000--Sobic005G201000 Sobic009G259100 Sobic009G259100 Sobic005G132000--Sobic009G259100 Sobic005G132000--Sobic009G040400 Sobic005G132000--Sobic007G010800 Sobic007G146400 Sobic007G146400 Sobic005G132000--Sobic007G146400 Sobic010G132600 Sobic010G132600 Sobic005G132000--Sobic010G132600 Sobic002G295100 Sobic002G295100 Sobic005G132000--Sobic002G295100 Sobic005G132000--Sobic003G003450 Sobic004G146600 Sobic004G146600 Sobic005G038500--Sobic004G146600 Sobic005G038500--Sobic010G132600 Sobic003G107500 Sobic003G107500 Sobic005G038500--Sobic003G107500 Sobic005G038500--Sobic003G105900 Sobic005G187300 Sobic005G187300 Sobic005G038500--Sobic005G187300 Sobic010G014100 Sobic010G014100 Sobic005G038500--Sobic010G014100 Sobic003G310300 Sobic003G310300 Sobic005G038500--Sobic003G310300 Sobic001G094600 Sobic001G094600 Sobic005G038500--Sobic001G094600 Sobic004G001500 Sobic004G001500 Sobic005G038500--Sobic004G001500 Sobic001G060100 Sobic001G060100 Sobic003G011900--Sobic001G060100 Sobic001G198100 Sobic001G198100 Sobic003G011900--Sobic001G198100 Sobic010G255700 Sobic010G255700 Sobic003G011900--Sobic010G255700 Sobic003G011900--Sobic003G057233 Sobic010G243900 Sobic010G243900 Sobic003G011900--Sobic010G243900 Sobic001G169900 Sobic001G169900 Sobic003G011900--Sobic001G169900 Sobic004G258700 Sobic004G258700 Sobic003G011900--Sobic004G258700 Sobic006G079400 Sobic006G079400 Sobic003G011900--Sobic006G079400 Sobic002G006600 Sobic002G006600 Sobic003G011900--Sobic002G006600 Sobic001G394800 Sobic001G394800 Sobic003G057233--Sobic001G394800 Sobic003G057233--Sobic001G169900 Sobic003G057233--Sobic001G198100 Sobic003G017100 Sobic003G017100 Sobic003G057233--Sobic003G017100 Sobic003G057233--Sobic004G258700 Sobic010G248700 Sobic010G248700 Sobic003G057233--Sobic010G248700 Sobic003G057233--Sobic010G132600 Sobic010G002700 Sobic010G002700 Sobic003G057233--Sobic010G002700 Sobic006G219150 Sobic006G219150 Sobic003G057233--Sobic006G219150 Sobic003G105900--Sobic009G040400 Sobic003G298200 Sobic003G298200 Sobic003G105900--Sobic003G298200 Sobic003G264800 Sobic003G264800 Sobic003G105900--Sobic003G264800 Sobic009G162600 Sobic009G162600 Sobic003G105900--Sobic009G162600 Sobic003G105900--Sobic003G107500 Sobic003G105900--Sobic005G038500 Sobic003G105900--Sobic003G029500 Sobic009G103000 Sobic009G103000 Sobic003G105900--Sobic009G103000 Sobic007G079400 Sobic007G079400 Sobic003G105900--Sobic007G079400 Sobic003G150500 Sobic003G150500 Sobic001G282800--Sobic003G150500 Sobic001G411200 Sobic001G411200 Sobic001G282800--Sobic001G411200 Sobic001G282800--Sobic004G154700 Sobic002G004600 Sobic002G004600 Sobic001G282800--Sobic002G004600 Sobic009G231800 Sobic009G231800 Sobic001G282800--Sobic009G231800 Sobic002G043800 Sobic002G043800 Sobic001G282800--Sobic002G043800 Sobic004G151800 Sobic004G151800 Sobic001G282800--Sobic004G151800 Sobic004G143300 Sobic004G143300 Sobic001G282800--Sobic004G143300 Sobic002G407000 Sobic002G407000 Sobic001G282800--Sobic002G407000
Octagon: transcription factors


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