Gene annotation
Transcriptome id Sobic.009G244700.1
Synonym Sb09g029580
Functional annotation dnaJ domain containing protein, expressed
UniProt C5YWE9
Pfam -
Panther DB PTHR23172 PTHR23172:SF19
NCBI CDD KOG0431; Auxilin-like protein and related proteins containing DnaJ domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75310 : auxin-like 1 protein
RAP-DB (Rice) LOC_Os05g50370.1 : dnaJ domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028309 , Zm00025a044695
Brachypodium PNT70643 , KQK08881 , KQK08882 , KQK04659
Barley HORVU3Hr1G056550.10 , HORVU3Hr1G056550.8 , HORVU3Hr1G056550.9 , HORVU3Hr1G056550.1 , HORVU3Hr1G056550.2 , HORVU3Hr1G056550.3 , HORVU3Hr1G056550.4 , HORVU3Hr1G056550.5 , HORVU3Hr1G056550.6 , HORVU3Hr1G056550.7 , HORVU5Hr1G024350.7 , HORVU5Hr1G024350.6
Wheat TraesCS3D02G224500 , TraesCS3B02G258000 , TraesCS3B02G258000 , TraesCS3A02G226500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G492300 OsPP2Ac-5 - Phosphatase 2A isoform 5 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
2 Sobic.004G154700 choline/ethanolamine kinase, putative, expressed -
3 Sobic.010G009800 OsFBX182 - F-box domain containing protein, expressed -
4 Sobic.005G143900 regulator of chromosome condensation, putative, expressed -
5 Sobic.005G132000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
6 Sobic.004G355700 C2 domain containing protein, putative, expressed -
7 Sobic.010G014100 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
8 Sobic.002G188600 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
9 Sobic.005G038500 pentatricopeptide containing protein, putative, expressed -
10 Sobic.004G131800 sirohydrochlorin ferrochelatase, putative, expressed -
11 Sobic.003G277400 violaxanthin de-epoxidase, putative, expressed -
12 Sobic.010G223700 MYB transcription factor, putative, expressed -
13 Sobic.006G264000 WD domain, G-beta repeat domain containing protein, expressed -
14 Sobic.001G425800 src homology-3 domain protein 3, putative, expressed -
15 Sobic.002G048700 BT1 family protein, putative, expressed -
16 Sobic.001G057700 heat stress transcription factor, putative, expressed K09419: heat shock transcription factor, other eukaryote
17 Sobic.003G105900 expressed protein -
18 Sobic.001G226700 WD repeat-containing protein, putative, expressed -
19 Sobic.007G146400 chaperonin Cpn60/TCP-1, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
20 Sobic.010G132600 selenoprotein O, putative, expressed -


Gene co-expression network
sample Sobic009G244700 Sobic009G244700 Sobic001G492300 Sobic001G492300 Sobic009G244700--Sobic001G492300 Sobic004G154700 Sobic004G154700 Sobic009G244700--Sobic004G154700 Sobic010G009800 Sobic010G009800 Sobic009G244700--Sobic010G009800 Sobic005G143900 Sobic005G143900 Sobic009G244700--Sobic005G143900 Sobic005G132000 Sobic005G132000 Sobic009G244700--Sobic005G132000 Sobic004G355700 Sobic004G355700 Sobic009G244700--Sobic004G355700 Sobic010G014100 Sobic010G014100 Sobic009G244700--Sobic010G014100 Sobic002G188600 Sobic002G188600 Sobic009G244700--Sobic002G188600 Sobic005G038500 Sobic005G038500 Sobic009G244700--Sobic005G038500 Sobic004G131800 Sobic004G131800 Sobic001G492300--Sobic004G131800 Sobic001G492300--Sobic010G014100 Sobic010G226000 Sobic010G226000 Sobic001G492300--Sobic010G226000 Sobic003G316500 Sobic003G316500 Sobic001G492300--Sobic003G316500 Sobic001G389100 Sobic001G389100 Sobic001G492300--Sobic001G389100 Sobic001G456300 Sobic001G456300 Sobic001G492300--Sobic001G456300 Sobic009G074400 Sobic009G074400 Sobic001G492300--Sobic009G074400 Sobic001G451400 Sobic001G451400 Sobic001G492300--Sobic001G451400 Sobic001G492300--Sobic005G038500 Sobic003G277400 Sobic003G277400 Sobic004G154700--Sobic003G277400 Sobic009G040400 Sobic009G040400 Sobic004G154700--Sobic009G040400 Sobic007G010800 Sobic007G010800 Sobic004G154700--Sobic007G010800 Sobic004G154700--Sobic005G132000 Sobic004G154700--Sobic005G038500 Sobic003G011900 Sobic003G011900 Sobic004G154700--Sobic003G011900 Sobic003G057233 Sobic003G057233 Sobic004G154700--Sobic003G057233 Sobic003G105900 Sobic003G105900 Sobic004G154700--Sobic003G105900 Sobic001G282800 Sobic001G282800 Sobic004G154700--Sobic001G282800 Sobic007G165900 Sobic007G165900 Sobic010G009800--Sobic007G165900 Sobic003G379200 Sobic003G379200 Sobic010G009800--Sobic003G379200 Sobic003G104000 Sobic003G104000 Sobic010G009800--Sobic003G104000 Sobic006G261400 Sobic006G261400 Sobic010G009800--Sobic006G261400 Sobic001G395100 Sobic001G395100 Sobic010G009800--Sobic001G395100 Sobic002G052700 Sobic002G052700 Sobic010G009800--Sobic002G052700 Sobic001G515000 Sobic001G515000 Sobic010G009800--Sobic001G515000 Sobic001G096000 Sobic001G096000 Sobic010G009800--Sobic001G096000 Sobic008G124900 Sobic008G124900 Sobic010G009800--Sobic008G124900 Sobic010G223700 Sobic010G223700 Sobic005G143900--Sobic010G223700 Sobic006G251000 Sobic006G251000 Sobic005G143900--Sobic006G251000 Sobic006G264000 Sobic006G264000 Sobic005G143900--Sobic006G264000 Sobic003G362600 Sobic003G362600 Sobic005G143900--Sobic003G362600 Sobic005G143900--Sobic010G226000 Sobic010G076300 Sobic010G076300 Sobic005G143900--Sobic010G076300 Sobic006G101800 Sobic006G101800 Sobic005G143900--Sobic006G101800 Sobic002G048700 Sobic002G048700 Sobic005G143900--Sobic002G048700 Sobic001G251200 Sobic001G251200 Sobic005G143900--Sobic001G251200 Sobic003G029500 Sobic003G029500 Sobic005G132000--Sobic003G029500 Sobic005G201000 Sobic005G201000 Sobic005G132000--Sobic005G201000 Sobic009G259100 Sobic009G259100 Sobic005G132000--Sobic009G259100 Sobic005G132000--Sobic009G040400 Sobic005G132000--Sobic007G010800 Sobic007G146400 Sobic007G146400 Sobic005G132000--Sobic007G146400 Sobic010G132600 Sobic010G132600 Sobic005G132000--Sobic010G132600 Sobic002G295100 Sobic002G295100 Sobic005G132000--Sobic002G295100 Sobic003G003450 Sobic003G003450 Sobic005G132000--Sobic003G003450 Sobic003G271400 Sobic003G271400 Sobic004G355700--Sobic003G271400 Sobic001G212300 Sobic001G212300 Sobic004G355700--Sobic001G212300 Sobic004G337400 Sobic004G337400 Sobic004G355700--Sobic004G337400 Sobic004G042200 Sobic004G042200 Sobic004G355700--Sobic004G042200 Sobic005G198000 Sobic005G198000 Sobic004G355700--Sobic005G198000 Sobic008G168300 Sobic008G168300 Sobic004G355700--Sobic008G168300 Sobic003G276300 Sobic003G276300 Sobic004G355700--Sobic003G276300 Sobic005G106600 Sobic005G106600 Sobic004G355700--Sobic005G106600 Sobic003G191700 Sobic003G191700 Sobic004G355700--Sobic003G191700 Sobic003G107500 Sobic003G107500 Sobic010G014100--Sobic003G107500 Sobic002G211800 Sobic002G211800 Sobic010G014100--Sobic002G211800 Sobic001G128300 Sobic001G128300 Sobic010G014100--Sobic001G128300 Sobic010G014100--Sobic010G226000 Sobic001G310100 Sobic001G310100 Sobic010G014100--Sobic001G310100 Sobic002G344000 Sobic002G344000 Sobic010G014100--Sobic002G344000 Sobic001G100900 Sobic001G100900 Sobic010G014100--Sobic001G100900 Sobic010G014100--Sobic001G389100 Sobic002G213300 Sobic002G213300 Sobic010G014100--Sobic002G213300 Sobic002G408200 Sobic002G408200 Sobic002G188600--Sobic002G408200 Sobic002G188600--Sobic001G389100 Sobic006G219150 Sobic006G219150 Sobic002G188600--Sobic006G219150 Sobic001G456900 Sobic001G456900 Sobic002G188600--Sobic001G456900 Sobic002G188600--Sobic001G451400 Sobic004G258700 Sobic004G258700 Sobic002G188600--Sobic004G258700 Sobic001G046200 Sobic001G046200 Sobic002G188600--Sobic001G046200 Sobic001G036050 Sobic001G036050 Sobic002G188600--Sobic001G036050 Sobic010G139000 Sobic010G139000 Sobic002G188600--Sobic010G139000 Sobic004G146600 Sobic004G146600 Sobic005G038500--Sobic004G146600 Sobic005G038500--Sobic010G132600 Sobic005G038500--Sobic003G107500 Sobic005G038500--Sobic003G105900 Sobic005G187300 Sobic005G187300 Sobic005G038500--Sobic005G187300 Sobic005G038500--Sobic010G014100 Sobic003G310300 Sobic003G310300 Sobic005G038500--Sobic003G310300 Sobic001G094600 Sobic001G094600 Sobic005G038500--Sobic001G094600 Sobic004G001500 Sobic004G001500 Sobic005G038500--Sobic004G001500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.