Gene annotation
Transcriptome id Sobic.003G298200.1
Synonym Sb03g034820
Functional annotation dehydrogenase, putative, expressed
UniProt A0A1B6Q635
Pfam PF08240 PF13602
Panther DB PTHR11695 PTHR11695:SF509
NCBI CDD KOG1198; Zinc-binding oxidoreductase
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G15090 : GroES-like zinc-binding alcohol dehydrogenase family protein
RAP-DB (Rice) LOC_Os01g54940.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a027542
Brachypodium KQK09765 , KQK09764
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G298200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G150100 expressed protein -
2 Sobic.004G086300 FAD binding domain of DNA photolyase domain containing protein, expressed K02295: cryptochrome
3 Sobic.003G150500 uncharacterized aarF domain-containing protein kinase 4, putative, expressed K08869: ADCK, aarF domain-containing kinase
4 Sobic.003G107500 expressed protein K10841: ERCC6, CSB, DNA excision repair protein ERCC-6
5 Sobic.003G105900 expressed protein -
6 Sobic.005G201000 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
7 Sobic.009G040400 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
8 Sobic.002G043800 regulator of chromosome condensation/beta-lactamase-inhibitor protein II, putative, expressed -
9 Sobic.009G103000 ubiquitin family protein, putative, expressed -
10 Sobic.002G275100 response regulator receiver domain containing protein, expressed K12130: pseudo-response regulator 5
11 Sobic.005G038500 pentatricopeptide containing protein, putative, expressed -
12 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
13 Sobic.002G196200 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM motif family protein, expressed K13464: jasmonate ZIM domain-containing protein
14 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
15 Sobic.007G010800 similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein -
16 Sobic.008G167600 VTC2, putative, expressed -
17 Sobic.003G029500 zinc finger, C3HC4 type family protein, expressed -
18 Sobic.001G310100 WD domain, G-beta repeat domain containing protein, expressed K11804: DDB1- and CUL4-associated factor 8
19 Sobic.004G151300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF803 domain containing, putative, expressed -
20 Sobic.003G003450 - K01177: beta-amylase


Gene co-expression network
sample Sobic003G298200 Sobic003G298200 Sobic010G150100 Sobic010G150100 Sobic003G298200--Sobic010G150100 Sobic004G086300 Sobic004G086300 Sobic003G298200--Sobic004G086300 Sobic003G150500 Sobic003G150500 Sobic003G298200--Sobic003G150500 Sobic003G107500 Sobic003G107500 Sobic003G298200--Sobic003G107500 Sobic003G105900 Sobic003G105900 Sobic003G298200--Sobic003G105900 Sobic005G201000 Sobic005G201000 Sobic003G298200--Sobic005G201000 Sobic009G040400 Sobic009G040400 Sobic003G298200--Sobic009G040400 Sobic002G043800 Sobic002G043800 Sobic003G298200--Sobic002G043800 Sobic009G103000 Sobic009G103000 Sobic003G298200--Sobic009G103000 Sobic004G151300 Sobic004G151300 Sobic010G150100--Sobic004G151300 Sobic004G312600 Sobic004G312600 Sobic010G150100--Sobic004G312600 Sobic001G331600 Sobic001G331600 Sobic010G150100--Sobic001G331600 Sobic001G345100 Sobic001G345100 Sobic010G150100--Sobic001G345100 Sobic004G143300 Sobic004G143300 Sobic010G150100--Sobic004G143300 Sobic004G127800 Sobic004G127800 Sobic010G150100--Sobic004G127800 Sobic010G150100--Sobic002G043800 Sobic007G227100 Sobic007G227100 Sobic010G150100--Sobic007G227100 Sobic003G003450 Sobic003G003450 Sobic010G150100--Sobic003G003450 Sobic004G086300--Sobic003G298200 Sobic004G086300--Sobic003G150500 Sobic007G010800 Sobic007G010800 Sobic004G086300--Sobic007G010800 Sobic003G428600 Sobic003G428600 Sobic004G086300--Sobic003G428600 Sobic003G426900 Sobic003G426900 Sobic004G086300--Sobic003G426900 Sobic003G277400 Sobic003G277400 Sobic004G086300--Sobic003G277400 Sobic002G295100 Sobic002G295100 Sobic004G086300--Sobic002G295100 Sobic004G086300--Sobic001G331600 Sobic004G086300--Sobic010G150100 Sobic003G150500--Sobic002G043800 Sobic003G150500--Sobic003G298200 Sobic003G150500--Sobic003G107500 Sobic003G150500--Sobic010G150100 Sobic001G282800 Sobic001G282800 Sobic003G150500--Sobic001G282800 Sobic001G411200 Sobic001G411200 Sobic003G150500--Sobic001G411200 Sobic005G176100 Sobic005G176100 Sobic003G150500--Sobic005G176100 Sobic003G150500--Sobic004G151300 Sobic003G150500--Sobic004G086300 Sobic004G001500 Sobic004G001500 Sobic003G107500--Sobic004G001500 Sobic003G107500--Sobic002G043800 Sobic002G383600 Sobic002G383600 Sobic003G107500--Sobic002G383600 Sobic001G310100 Sobic001G310100 Sobic003G107500--Sobic001G310100 Sobic004G146600 Sobic004G146600 Sobic003G107500--Sobic004G146600 Sobic003G107500--Sobic003G298200 Sobic003G373500 Sobic003G373500 Sobic003G107500--Sobic003G373500 Sobic005G187300 Sobic005G187300 Sobic003G107500--Sobic005G187300 Sobic010G014100 Sobic010G014100 Sobic003G107500--Sobic010G014100 Sobic003G105900--Sobic009G040400 Sobic003G105900--Sobic003G298200 Sobic003G264800 Sobic003G264800 Sobic003G105900--Sobic003G264800 Sobic009G162600 Sobic009G162600 Sobic003G105900--Sobic009G162600 Sobic003G105900--Sobic003G107500 Sobic005G038500 Sobic005G038500 Sobic003G105900--Sobic005G038500 Sobic003G029500 Sobic003G029500 Sobic003G105900--Sobic003G029500 Sobic003G105900--Sobic009G103000 Sobic007G079400 Sobic007G079400 Sobic003G105900--Sobic007G079400 Sobic005G201000--Sobic003G029500 Sobic005G132000 Sobic005G132000 Sobic005G201000--Sobic005G132000 Sobic005G201000--Sobic009G040400 Sobic006G051800 Sobic006G051800 Sobic005G201000--Sobic006G051800 Sobic005G201000--Sobic007G010800 Sobic005G201000--Sobic010G150100 Sobic010G092350 Sobic010G092350 Sobic005G201000--Sobic010G092350 Sobic003G057233 Sobic003G057233 Sobic005G201000--Sobic003G057233 Sobic001G298900 Sobic001G298900 Sobic005G201000--Sobic001G298900 Sobic009G040400--Sobic007G010800 Sobic009G040400--Sobic005G132000 Sobic009G040400--Sobic003G105900 Sobic009G040400--Sobic005G201000 Sobic009G040400--Sobic003G029500 Sobic009G040400--Sobic010G092350 Sobic002G275200 Sobic002G275200 Sobic009G040400--Sobic002G275200 Sobic002G356900 Sobic002G356900 Sobic009G040400--Sobic002G356900 Sobic002G138100 Sobic002G138100 Sobic009G040400--Sobic002G138100 Sobic002G043800--Sobic010G150100 Sobic002G043800--Sobic003G107500 Sobic002G043800--Sobic004G146600 Sobic008G167600 Sobic008G167600 Sobic002G043800--Sobic008G167600 Sobic002G043800--Sobic004G151300 Sobic002G043800--Sobic003G150500 Sobic002G043800--Sobic004G312600 Sobic003G271400 Sobic003G271400 Sobic002G043800--Sobic003G271400 Sobic002G043800--Sobic002G295100 Sobic007G087100 Sobic007G087100 Sobic009G103000--Sobic007G087100 Sobic001G077300 Sobic001G077300 Sobic009G103000--Sobic001G077300 Sobic009G170200 Sobic009G170200 Sobic009G103000--Sobic009G170200 Sobic009G073900 Sobic009G073900 Sobic009G103000--Sobic009G073900 Sobic009G103000--Sobic003G003450 Sobic006G232600 Sobic006G232600 Sobic009G103000--Sobic006G232600 Sobic006G213700 Sobic006G213700 Sobic009G103000--Sobic006G213700 Sobic001G378100 Sobic001G378100 Sobic009G103000--Sobic001G378100 Sobic006G212800 Sobic006G212800 Sobic009G103000--Sobic006G212800
Octagon: transcription factors


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