Gene annotation
Transcriptome id Sobic.003G150500.1
Synonym ABC1, ATABC1, Sb03g013060, ATATH10
Functional annotation uncharacterized aarF domain-containing protein kinase 4, putative, expressed
UniProt C5XIW6
Pfam PF03109
Panther DB PTHR10566 PTHR10566:SF65
NCBI CDD -
KEGG Orthology K08869; ADCK, aarF domain-containing kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G01660 : ABC transporter 1
RAP-DB (Rice) LOC_Os01g21610.1 : uncharacterized aarF domain-containing protein kinase 4, putative, expressed
MaizeGDB (Corn) Zm00025a036144
Brachypodium KQK04157
Barley HORVU6Hr1G019930.6 , HORVU6Hr1G019930.7 , HORVU6Hr1G019930.4 , HORVU6Hr1G019930.5 , HORVU6Hr1G019930.2 , HORVU6Hr1G019930.3 , HORVU6Hr1G019930.1
Wheat TraesCS6B02G139300 , TraesCS6D02G099800 , TraesCS6D02G099800 , TraesCS6D02G099800 , TraesCS6A02G111200 , TraesCS6A02G111200 , TraesCS6A02G111200 , TraesCS6B02G139300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G043800 regulator of chromosome condensation/beta-lactamase-inhibitor protein II, putative, expressed -
2 Sobic.003G298200 dehydrogenase, putative, expressed -
3 Sobic.003G107500 expressed protein K10841: ERCC6, CSB, DNA excision repair protein ERCC-6
4 Sobic.010G150100 expressed protein -
5 Sobic.001G282800 AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
6 Sobic.001G411200 cat eye syndrome critical region protein 5 precursor, putative, expressed -
7 Sobic.005G176100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mannose-6-phosphate isomerase, putative, expressed K01809: manA, mannose-6-phosphate isomerase
8 Sobic.004G151300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF803 domain containing, putative, expressed -
9 Sobic.004G086300 FAD binding domain of DNA photolyase domain containing protein, expressed K02295: cryptochrome
10 Sobic.001G310100 WD domain, G-beta repeat domain containing protein, expressed K11804: DDB1- and CUL4-associated factor 8
11 Sobic.004G282900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
12 Sobic.003G271400 chloride transporter, chloride channel family, putative, expressed -
13 Sobic.008G167600 VTC2, putative, expressed -
14 Sobic.006G250800 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
15 Sobic.002G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
16 Sobic.001G331600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
17 Sobic.002G252300 expressed protein -
18 Sobic.010G134000 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
19 Sobic.002G407000 4-alpha-glucanotransferase, putative, expressed K00705: 4-alpha-glucanotransferase
20 Sobic.003G105900 expressed protein -


Gene co-expression network
sample Sobic003G150500 Sobic003G150500 Sobic002G043800 Sobic002G043800 Sobic003G150500--Sobic002G043800 Sobic003G298200 Sobic003G298200 Sobic003G150500--Sobic003G298200 Sobic003G107500 Sobic003G107500 Sobic003G150500--Sobic003G107500 Sobic010G150100 Sobic010G150100 Sobic003G150500--Sobic010G150100 Sobic001G282800 Sobic001G282800 Sobic003G150500--Sobic001G282800 Sobic001G411200 Sobic001G411200 Sobic003G150500--Sobic001G411200 Sobic005G176100 Sobic005G176100 Sobic003G150500--Sobic005G176100 Sobic004G151300 Sobic004G151300 Sobic003G150500--Sobic004G151300 Sobic004G086300 Sobic004G086300 Sobic003G150500--Sobic004G086300 Sobic002G043800--Sobic010G150100 Sobic002G043800--Sobic003G107500 Sobic004G146600 Sobic004G146600 Sobic002G043800--Sobic004G146600 Sobic008G167600 Sobic008G167600 Sobic002G043800--Sobic008G167600 Sobic002G043800--Sobic004G151300 Sobic002G043800--Sobic003G150500 Sobic004G312600 Sobic004G312600 Sobic002G043800--Sobic004G312600 Sobic003G271400 Sobic003G271400 Sobic002G043800--Sobic003G271400 Sobic002G295100 Sobic002G295100 Sobic002G043800--Sobic002G295100 Sobic003G298200--Sobic010G150100 Sobic003G298200--Sobic004G086300 Sobic003G298200--Sobic003G150500 Sobic003G298200--Sobic003G107500 Sobic003G105900 Sobic003G105900 Sobic003G298200--Sobic003G105900 Sobic005G201000 Sobic005G201000 Sobic003G298200--Sobic005G201000 Sobic009G040400 Sobic009G040400 Sobic003G298200--Sobic009G040400 Sobic003G298200--Sobic002G043800 Sobic009G103000 Sobic009G103000 Sobic003G298200--Sobic009G103000 Sobic004G001500 Sobic004G001500 Sobic003G107500--Sobic004G001500 Sobic003G107500--Sobic002G043800 Sobic002G383600 Sobic002G383600 Sobic003G107500--Sobic002G383600 Sobic001G310100 Sobic001G310100 Sobic003G107500--Sobic001G310100 Sobic003G107500--Sobic004G146600 Sobic003G107500--Sobic003G298200 Sobic003G373500 Sobic003G373500 Sobic003G107500--Sobic003G373500 Sobic005G187300 Sobic005G187300 Sobic003G107500--Sobic005G187300 Sobic010G014100 Sobic010G014100 Sobic003G107500--Sobic010G014100 Sobic010G150100--Sobic004G151300 Sobic010G150100--Sobic004G312600 Sobic001G331600 Sobic001G331600 Sobic010G150100--Sobic001G331600 Sobic001G345100 Sobic001G345100 Sobic010G150100--Sobic001G345100 Sobic004G143300 Sobic004G143300 Sobic010G150100--Sobic004G143300 Sobic004G127800 Sobic004G127800 Sobic010G150100--Sobic004G127800 Sobic010G150100--Sobic002G043800 Sobic007G227100 Sobic007G227100 Sobic010G150100--Sobic007G227100 Sobic003G003450 Sobic003G003450 Sobic010G150100--Sobic003G003450 Sobic001G282800--Sobic003G150500 Sobic001G282800--Sobic001G411200 Sobic004G154700 Sobic004G154700 Sobic001G282800--Sobic004G154700 Sobic002G004600 Sobic002G004600 Sobic001G282800--Sobic002G004600 Sobic009G231800 Sobic009G231800 Sobic001G282800--Sobic009G231800 Sobic001G282800--Sobic002G043800 Sobic004G151800 Sobic004G151800 Sobic001G282800--Sobic004G151800 Sobic001G282800--Sobic004G143300 Sobic002G407000 Sobic002G407000 Sobic001G282800--Sobic002G407000 Sobic001G411200--Sobic002G407000 Sobic001G411200--Sobic004G151800 Sobic001G411200--Sobic004G151300 Sobic001G411200--Sobic001G345100 Sobic001G411200--Sobic003G150500 Sobic002G252300 Sobic002G252300 Sobic001G411200--Sobic002G252300 Sobic001G411200--Sobic010G150100 Sobic010G134000 Sobic010G134000 Sobic001G411200--Sobic010G134000 Sobic001G411200--Sobic004G143300 Sobic001G112900 Sobic001G112900 Sobic005G176100--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic005G176100--Sobic003G339200 Sobic004G344600 Sobic004G344600 Sobic005G176100--Sobic004G344600 Sobic002G052100 Sobic002G052100 Sobic005G176100--Sobic002G052100 Sobic003G162400 Sobic003G162400 Sobic005G176100--Sobic003G162400 Sobic001G181100 Sobic001G181100 Sobic005G176100--Sobic001G181100 Sobic004G282900 Sobic004G282900 Sobic005G176100--Sobic004G282900 Sobic004G214800 Sobic004G214800 Sobic005G176100--Sobic004G214800 Sobic010G183600 Sobic010G183600 Sobic005G176100--Sobic010G183600 Sobic004G151300--Sobic010G150100 Sobic004G151300--Sobic008G167600 Sobic004G151300--Sobic001G345100 Sobic006G090100 Sobic006G090100 Sobic004G151300--Sobic006G090100 Sobic004G151300--Sobic004G312600 Sobic001G207800 Sobic001G207800 Sobic004G151300--Sobic001G207800 Sobic004G151300--Sobic001G331600 Sobic002G382700 Sobic002G382700 Sobic004G151300--Sobic002G382700 Sobic004G151300--Sobic007G227100 Sobic004G086300--Sobic003G298200 Sobic004G086300--Sobic003G150500 Sobic007G010800 Sobic007G010800 Sobic004G086300--Sobic007G010800 Sobic003G428600 Sobic003G428600 Sobic004G086300--Sobic003G428600 Sobic003G426900 Sobic003G426900 Sobic004G086300--Sobic003G426900 Sobic003G277400 Sobic003G277400 Sobic004G086300--Sobic003G277400 Sobic004G086300--Sobic002G295100 Sobic004G086300--Sobic001G331600 Sobic004G086300--Sobic010G150100
Octagon: transcription factors


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