Gene annotation
Transcriptome id Sobic.003G373100.1
Synonym Sb03g041370
Functional annotation patellin protein, putative, expressed
UniProt A0A1B6Q7A0
Pfam PF03765 PF00650
Panther DB PTHR23324 PTHR23324:SF81
NCBI CDD KOG1471; Phosphatidylinositol transfer protein SEC14 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G09160 : SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
RAP-DB (Rice) LOC_Os01g65380.1 : patellin protein, putative, expressed
MaizeGDB (Corn) Zm00025a043770 , Zm00025a026625 , Zm00025a039541
Brachypodium KQK06106 , KQK06107 , KQK06105 , KQK10837
Barley HORVU1Hr1G075150.4 , HORVU1Hr1G075150.1 , HORVU1Hr1G075150.3 , HORVU1Hr1G075150.2 , HORVU3Hr1G082150.1 , HORVU3Hr1G082110.5 , HORVU3Hr1G082110.4 , HORVU3Hr1G082110.7 , HORVU3Hr1G082110.6 , HORVU3Hr1G082110.1 , HORVU3Hr1G082110.3 , HORVU3Hr1G082110.2
Wheat TraesCS3A02G385300 , TraesCS1D02G268600 , TraesCS3D02G378300 , TraesCS1A02G268500 , TraesCS1A02G268500 , TraesCS1B02G279200 , TraesCS3B02G417500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G073300 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.001G532200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsRhmbd7 - Putative Rhomboid homologue, expressed -
3 Sobic.004G212300 determined the crystal structures of SbHCT in its apo-form and ternary complex with shikimate and p-coumaroyl-CoA(PubMedID : 23624856)@"shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
4 Sobic.001G113700 cytochrome b561, putative, expressed K08360: cytochrome b-561
5 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -
6 Sobic.008G151300 expressed protein -
7 Sobic.004G288700 similar to Aquaporin PIP1-3/PIP1-4(PubMedID : 29862293)@up-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
8 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
9 Sobic.005G231700 ZOS7-01 - C2H2 zinc finger protein, expressed -
10 Sobic.002G270000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BAG domain-containing protein, putative, expressed -
11 Sobic.002G337800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.006G087900 TKL_IRAK_CR4L.3 - The CR4L subfamily has homology with Crinkly4, expressed -
13 Sobic.001G084100 UDP-glucose 6-dehydrogenase 5(PubMedID : 26186930)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
14 Sobic.007G186100 protein kinase, putative, expressed K13436: pto-interacting protein 1
15 Sobic.002G272900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
16 Sobic.007G124301 - -
17 Sobic.007G057100 expressed protein -
18 Sobic.002G325900 aspartic proteinase nepenthesin precursor, putative, expressed -
19 Sobic.003G296700 protein kinase domain containing protein, expressed -
20 Sobic.009G220200 exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic003G373100 Sobic003G373100 Sobic009G073300 Sobic009G073300 Sobic003G373100--Sobic009G073300 Sobic001G532200 Sobic001G532200 Sobic003G373100--Sobic001G532200 Sobic004G212300 Sobic004G212300 Sobic003G373100--Sobic004G212300 Sobic001G113700 Sobic001G113700 Sobic003G373100--Sobic001G113700 Sobic009G208800 Sobic009G208800 Sobic003G373100--Sobic009G208800 Sobic008G151300 Sobic008G151300 Sobic003G373100--Sobic008G151300 Sobic004G288700 Sobic004G288700 Sobic003G373100--Sobic004G288700 Sobic001G516600 Sobic001G516600 Sobic003G373100--Sobic001G516600 Sobic005G231700 Sobic005G231700 Sobic003G373100--Sobic005G231700 Sobic009G073300--Sobic001G532200 Sobic004G286600 Sobic004G286600 Sobic009G073300--Sobic004G286600 Sobic008G177800 Sobic008G177800 Sobic009G073300--Sobic008G177800 Sobic001G437000 Sobic001G437000 Sobic009G073300--Sobic001G437000 Sobic006G231100 Sobic006G231100 Sobic009G073300--Sobic006G231100 Sobic007G057100 Sobic007G057100 Sobic009G073300--Sobic007G057100 Sobic009G073300--Sobic001G516600 Sobic006G194100 Sobic006G194100 Sobic009G073300--Sobic006G194100 Sobic001G173300 Sobic001G173300 Sobic009G073300--Sobic001G173300 Sobic001G532200--Sobic001G516600 Sobic001G084100 Sobic001G084100 Sobic001G532200--Sobic001G084100 Sobic001G532200--Sobic004G212300 Sobic001G513700 Sobic001G513700 Sobic001G532200--Sobic001G513700 Sobic009G248500 Sobic009G248500 Sobic001G532200--Sobic009G248500 Sobic007G151100 Sobic007G151100 Sobic001G532200--Sobic007G151100 Sobic010G052200 Sobic010G052200 Sobic001G532200--Sobic010G052200 Sobic001G532200--Sobic009G073300 Sobic009G027900 Sobic009G027900 Sobic001G532200--Sobic009G027900 Sobic004G212300--Sobic010G052200 Sobic004G212300--Sobic001G532200 Sobic003G119500 Sobic003G119500 Sobic004G212300--Sobic003G119500 Sobic004G062500 Sobic004G062500 Sobic004G212300--Sobic004G062500 Sobic004G212300--Sobic001G084100 Sobic004G212300--Sobic001G516600 Sobic006G156000 Sobic006G156000 Sobic004G212300--Sobic006G156000 Sobic002G040600 Sobic002G040600 Sobic004G212300--Sobic002G040600 Sobic010G252500 Sobic010G252500 Sobic004G212300--Sobic010G252500 Sobic009G220200 Sobic009G220200 Sobic001G113700--Sobic009G220200 Sobic001G217000 Sobic001G217000 Sobic001G113700--Sobic001G217000 Sobic001G051800 Sobic001G051800 Sobic001G113700--Sobic001G051800 Sobic002G210300 Sobic002G210300 Sobic001G113700--Sobic002G210300 Sobic003G338900 Sobic003G338900 Sobic001G113700--Sobic003G338900 Sobic001G113700--Sobic009G208800 Sobic001G113700--Sobic005G231700 Sobic002G379400 Sobic002G379400 Sobic001G113700--Sobic002G379400 Sobic003G296700 Sobic003G296700 Sobic001G113700--Sobic003G296700 Sobic009G208800--Sobic001G173300 Sobic004G257300 Sobic004G257300 Sobic009G208800--Sobic004G257300 Sobic009G208800--Sobic009G220200 Sobic009G208800--Sobic003G296700 Sobic009G208800--Sobic001G516600 Sobic009G208800--Sobic007G057100 Sobic002G294700 Sobic002G294700 Sobic009G208800--Sobic002G294700 Sobic009G208800--Sobic005G231700 Sobic009G208800--Sobic008G177800 Sobic008G151300--Sobic008G177800 Sobic008G151300--Sobic001G516600 Sobic010G262200 Sobic010G262200 Sobic008G151300--Sobic010G262200 Sobic004G333900 Sobic004G333900 Sobic008G151300--Sobic004G333900 Sobic005G010200 Sobic005G010200 Sobic008G151300--Sobic005G010200 Sobic008G151300--Sobic001G513700 Sobic010G234600 Sobic010G234600 Sobic008G151300--Sobic010G234600 Sobic002G272900 Sobic002G272900 Sobic008G151300--Sobic002G272900 Sobic008G151300--Sobic002G294700 Sobic006G176700 Sobic006G176700 Sobic004G288700--Sobic006G176700 Sobic004G288700--Sobic003G373100 Sobic004G222000 Sobic004G222000 Sobic004G288700--Sobic004G222000 Sobic002G270000 Sobic002G270000 Sobic004G288700--Sobic002G270000 Sobic002G124700 Sobic002G124700 Sobic004G288700--Sobic002G124700 Sobic004G288700--Sobic001G084100 Sobic009G002400 Sobic009G002400 Sobic004G288700--Sobic009G002400 Sobic001G294400 Sobic001G294400 Sobic004G288700--Sobic001G294400 Sobic004G288700--Sobic009G073300 Sobic001G516600--Sobic001G173300 Sobic001G516600--Sobic007G151100 Sobic003G037800 Sobic003G037800 Sobic001G516600--Sobic003G037800 Sobic001G516600--Sobic003G296700 Sobic010G268400 Sobic010G268400 Sobic001G516600--Sobic010G268400 Sobic001G516600--Sobic001G532200 Sobic006G131400 Sobic006G131400 Sobic001G516600--Sobic006G131400 Sobic001G516600--Sobic008G177800 Sobic002G245100 Sobic002G245100 Sobic001G516600--Sobic002G245100 Sobic006G087900 Sobic006G087900 Sobic005G231700--Sobic006G087900 Sobic001G063600 Sobic001G063600 Sobic005G231700--Sobic001G063600 Sobic002G325900 Sobic002G325900 Sobic005G231700--Sobic002G325900 Sobic005G231700--Sobic003G296700 Sobic010G080400 Sobic010G080400 Sobic005G231700--Sobic010G080400 Sobic005G231700--Sobic009G208800 Sobic008G159100 Sobic008G159100 Sobic005G231700--Sobic008G159100 Sobic002G337800 Sobic002G337800 Sobic005G231700--Sobic002G337800 Sobic004G025000 Sobic004G025000 Sobic005G231700--Sobic004G025000
Octagon: transcription factors


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