Gene annotation
Transcriptome id Sobic.003G402700.2,Sobic.003G402700.1
Synonym Sb03g043873
Functional annotation expressed protein
UniProt A0A1W0W149 , A0A1B6Q7U0
Pfam -
Panther DB PTHR39104
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07150 : -
RAP-DB (Rice) LOC_Os01g68960.1 : expressed protein
MaizeGDB (Corn) Zm00025a039331
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G393401 - -
2 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
3 Sobic.004G052800 DUF640 domain containing protein, putative, expressed -
4 Sobic.003G302000 expressed protein -
5 Sobic.001G184400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR55 - Auxin-responsive SAUR gene family member, expressed -
6 Sobic.007G152300 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
7 Sobic.006G153500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP25 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
8 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
9 Sobic.010G135300 expressed protein -
10 Sobic.003G300200 expressed protein -
11 Sobic.005G177900 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
12 Sobic.006G046600 expressed protein -
13 Sobic.002G071850 - -
14 Sobic.001G079900 expressed protein -
15 Sobic.002G007200 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.001G434100 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
17 Sobic.001G435201 - -
18 Sobic.006G154000 PCF-like (ClassI) Subclade 2 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
19 Sobic.010G021300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@histone H1, putative, expressed K11275: histone H1/5
20 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -


Gene co-expression network
sample Sobic003G402700 Sobic003G402700 Sobic001G393401 Sobic001G393401 Sobic003G402700--Sobic001G393401 Sobic001G384700 Sobic001G384700 Sobic003G402700--Sobic001G384700 Sobic004G052800 Sobic004G052800 Sobic003G402700--Sobic004G052800 Sobic003G302000 Sobic003G302000 Sobic003G402700--Sobic003G302000 Sobic001G184400 Sobic001G184400 Sobic003G402700--Sobic001G184400 Sobic007G152300 Sobic007G152300 Sobic003G402700--Sobic007G152300 Sobic006G153500 Sobic006G153500 Sobic003G402700--Sobic006G153500 Sobic002G216600 Sobic002G216600 Sobic003G402700--Sobic002G216600 Sobic010G135300 Sobic010G135300 Sobic003G402700--Sobic010G135300 Sobic003G023400 Sobic003G023400 Sobic001G393401--Sobic003G023400 Sobic001G393401--Sobic001G384700 Sobic001G393401--Sobic002G216600 Sobic002G060450 Sobic002G060450 Sobic001G393401--Sobic002G060450 Sobic010G190400 Sobic010G190400 Sobic001G393401--Sobic010G190400 Sobic005G204100 Sobic005G204100 Sobic001G393401--Sobic005G204100 Sobic001G393401--Sobic001G184400 Sobic002G049000 Sobic002G049000 Sobic001G393401--Sobic002G049000 Sobic001G393401--Sobic004G052800 Sobic001G384700--Sobic002G216600 Sobic001G079900 Sobic001G079900 Sobic001G384700--Sobic001G079900 Sobic009G141700 Sobic009G141700 Sobic001G384700--Sobic009G141700 Sobic006G046600 Sobic006G046600 Sobic001G384700--Sobic006G046600 Sobic001G384700--Sobic005G204100 Sobic001G384700--Sobic004G052800 Sobic005G168400 Sobic005G168400 Sobic001G384700--Sobic005G168400 Sobic001G379900 Sobic001G379900 Sobic001G384700--Sobic001G379900 Sobic001G434100 Sobic001G434100 Sobic001G384700--Sobic001G434100 Sobic004G052800--Sobic001G079900 Sobic004G052800--Sobic001G384700 Sobic004G052800--Sobic002G216600 Sobic005G177900 Sobic005G177900 Sobic004G052800--Sobic005G177900 Sobic007G197100 Sobic007G197100 Sobic004G052800--Sobic007G197100 Sobic004G052800--Sobic005G204100 Sobic005G032600 Sobic005G032600 Sobic004G052800--Sobic005G032600 Sobic004G012700 Sobic004G012700 Sobic004G052800--Sobic004G012700 Sobic004G052800--Sobic003G302000 Sobic007G165800 Sobic007G165800 Sobic003G302000--Sobic007G165800 Sobic004G274600 Sobic004G274600 Sobic003G302000--Sobic004G274600 Sobic007G163400 Sobic007G163400 Sobic003G302000--Sobic007G163400 Sobic007G170100 Sobic007G170100 Sobic003G302000--Sobic007G170100 Sobic007G180200 Sobic007G180200 Sobic003G302000--Sobic007G180200 Sobic003G356600 Sobic003G356600 Sobic003G302000--Sobic003G356600 Sobic005G199700 Sobic005G199700 Sobic003G302000--Sobic005G199700 Sobic008G097700 Sobic008G097700 Sobic003G302000--Sobic008G097700 Sobic001G286700 Sobic001G286700 Sobic003G302000--Sobic001G286700 Sobic001G184400--Sobic002G049000 Sobic010G091700 Sobic010G091700 Sobic001G184400--Sobic010G091700 Sobic002G367300 Sobic002G367300 Sobic001G184400--Sobic002G367300 Sobic002G090400 Sobic002G090400 Sobic001G184400--Sobic002G090400 Sobic010G208500 Sobic010G208500 Sobic001G184400--Sobic010G208500 Sobic002G297800 Sobic002G297800 Sobic001G184400--Sobic002G297800 Sobic005G195700 Sobic005G195700 Sobic001G184400--Sobic005G195700 Sobic001G184400--Sobic001G393401 Sobic001G422366 Sobic001G422366 Sobic001G184400--Sobic001G422366 Sobic007G152300--Sobic005G168400 Sobic004G003700 Sobic004G003700 Sobic007G152300--Sobic004G003700 Sobic001G143400 Sobic001G143400 Sobic007G152300--Sobic001G143400 Sobic006G154000 Sobic006G154000 Sobic007G152300--Sobic006G154000 Sobic007G152300--Sobic001G384700 Sobic010G168700 Sobic010G168700 Sobic007G152300--Sobic010G168700 Sobic002G050700 Sobic002G050700 Sobic007G152300--Sobic002G050700 Sobic009G185900 Sobic009G185900 Sobic007G152300--Sobic009G185900 Sobic007G152300--Sobic001G379900 Sobic006G153500--Sobic001G384700 Sobic003G300200 Sobic003G300200 Sobic006G153500--Sobic003G300200 Sobic006G153500--Sobic005G204100 Sobic009G259500 Sobic009G259500 Sobic006G153500--Sobic009G259500 Sobic006G153500--Sobic001G184400 Sobic006G153500--Sobic002G216600 Sobic002G072700 Sobic002G072700 Sobic006G153500--Sobic002G072700 Sobic006G153500--Sobic004G052800 Sobic005G029700 Sobic005G029700 Sobic006G153500--Sobic005G029700 Sobic002G216600--Sobic005G204100 Sobic002G216600--Sobic001G384700 Sobic004G144100 Sobic004G144100 Sobic002G216600--Sobic004G144100 Sobic002G216600--Sobic009G259500 Sobic004G199700 Sobic004G199700 Sobic002G216600--Sobic004G199700 Sobic002G216600--Sobic001G079900 Sobic002G216600--Sobic009G141700 Sobic003G174900 Sobic003G174900 Sobic002G216600--Sobic003G174900 Sobic002G348700 Sobic002G348700 Sobic002G216600--Sobic002G348700 Sobic002G142500 Sobic002G142500 Sobic010G135300--Sobic002G142500 Sobic006G257200 Sobic006G257200 Sobic010G135300--Sobic006G257200 Sobic002G098500 Sobic002G098500 Sobic010G135300--Sobic002G098500 Sobic001G113800 Sobic001G113800 Sobic010G135300--Sobic001G113800 Sobic008G038200 Sobic008G038200 Sobic010G135300--Sobic008G038200 Sobic001G019200 Sobic001G019200 Sobic010G135300--Sobic001G019200 Sobic001G047200 Sobic001G047200 Sobic010G135300--Sobic001G047200 Sobic002G293700 Sobic002G293700 Sobic010G135300--Sobic002G293700 Sobic001G298800 Sobic001G298800 Sobic010G135300--Sobic001G298800
Octagon: transcription factors


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