Gene annotation
Transcriptome id Sobic.004G013100.1
Synonym Sb04g001280, ATSPP, SPP
Functional annotation signal peptide peptidase domain containing protein, expressed
UniProt C5XSC1
Pfam PF04258
Panther DB PTHR12174
NCBI CDD KOG2443; Uncharacterized conserved protein
KEGG Orthology K09595; minor histocompatibility antigen H13
Gene Ontology GO:0016021; integral component of membrane GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT2G03120 : signal peptide peptidase
RAP-DB (Rice) LOC_Os05g36070.1 : signal peptide peptidase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a018720 , Zm00025a035047
Brachypodium KQJ92920 , KQK24085 , KQJ92919
Barley HORVU3Hr1G108010.9 , HORVU3Hr1G108010.8 , HORVU3Hr1G108010.1 , HORVU3Hr1G108010.3 , HORVU3Hr1G108010.2 , HORVU3Hr1G108010.5 , HORVU3Hr1G108010.4 , HORVU3Hr1G108010.7 , HORVU3Hr1G108010.6 , HORVU3Hr1G108010.10
Wheat TraesCS3B02G545500 , TraesCS6B02G064500 , TraesCS6B02G064500 , TraesCS3D02G492200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G103900 signal peptide peptidase domain containing protein, expressed -
2 Sobic.007G014900 STIP1 homology and U box-containing protein 1, putative, expressed K09561: STUB1, STIP1 homology and U-box containing protein 1
3 Sobic.008G118500 tRNA synthetase, putative, expressed K01867: WARS, tryptophanyl-tRNA synthetase
4 Sobic.004G091200 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
5 Sobic.007G039400 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
6 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
7 Sobic.009G160600 Yip1 domain containing protein, expressed -
8 Sobic.009G258400 adhesion regulating molecule family, putative, expressed -
9 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
10 Sobic.003G128300 NEDD8-activating enzyme E1 catalytic subunit, putative, expressed K10686: UBE1C, ubiquitin-activating enzyme E1 C
11 Sobic.010G176500 expressed protein -
12 Sobic.009G138700 WD repeat-containing protein 55, putative, expressed -
13 Sobic.010G220900 thioredoxin, putative, expressed K03671: thioredoxin 1
14 Sobic.001G005600 CBS domain containing membrane protein, putative, expressed -
15 Sobic.002G075900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed K12670: oligosaccharyltransferase complex subunit beta
16 Sobic.008G053600 alpha-1,4-fucosyltransferase, putative, expressed K14412: FUT13, alpha-1,4-fucosyltransferase
17 Sobic.001G093300 emp24/gp25L/p24 family protein, putative, expressed -
18 Sobic.001G426100 enolase, putative, expressed K01689: ENO, enolase
19 Sobic.005G074500 VHS and GAT domain containing protein, expressed -
20 Sobic.010G264000 expressed protein(PubMedID : 28640841)@expressed protein -


Gene co-expression network
sample Sobic004G013100 Sobic004G013100 Sobic001G103900 Sobic001G103900 Sobic004G013100--Sobic001G103900 Sobic007G014900 Sobic007G014900 Sobic004G013100--Sobic007G014900 Sobic008G118500 Sobic008G118500 Sobic004G013100--Sobic008G118500 Sobic004G091200 Sobic004G091200 Sobic004G013100--Sobic004G091200 Sobic007G039400 Sobic007G039400 Sobic004G013100--Sobic007G039400 Sobic008G103300 Sobic008G103300 Sobic004G013100--Sobic008G103300 Sobic009G160600 Sobic009G160600 Sobic004G013100--Sobic009G160600 Sobic009G258400 Sobic009G258400 Sobic004G013100--Sobic009G258400 Sobic001G114500 Sobic001G114500 Sobic004G013100--Sobic001G114500 Sobic003G312200 Sobic003G312200 Sobic001G103900--Sobic003G312200 Sobic001G103900--Sobic008G103300 Sobic008G055900 Sobic008G055900 Sobic001G103900--Sobic008G055900 Sobic006G034500 Sobic006G034500 Sobic001G103900--Sobic006G034500 Sobic003G046300 Sobic003G046300 Sobic001G103900--Sobic003G046300 Sobic006G044600 Sobic006G044600 Sobic001G103900--Sobic006G044600 Sobic006G055300 Sobic006G055300 Sobic001G103900--Sobic006G055300 Sobic002G300700 Sobic002G300700 Sobic001G103900--Sobic002G300700 Sobic001G091300 Sobic001G091300 Sobic001G103900--Sobic001G091300 Sobic001G085100 Sobic001G085100 Sobic007G014900--Sobic001G085100 Sobic004G356900 Sobic004G356900 Sobic007G014900--Sobic004G356900 Sobic010G205300 Sobic010G205300 Sobic007G014900--Sobic010G205300 Sobic006G225300 Sobic006G225300 Sobic007G014900--Sobic006G225300 Sobic007G167900 Sobic007G167900 Sobic007G014900--Sobic007G167900 Sobic006G183000 Sobic006G183000 Sobic007G014900--Sobic006G183000 Sobic007G014900--Sobic003G312200 Sobic004G194900 Sobic004G194900 Sobic007G014900--Sobic004G194900 Sobic007G188300 Sobic007G188300 Sobic007G014900--Sobic007G188300 Sobic001G178400 Sobic001G178400 Sobic008G118500--Sobic001G178400 Sobic006G087100 Sobic006G087100 Sobic008G118500--Sobic006G087100 Sobic009G102900 Sobic009G102900 Sobic008G118500--Sobic009G102900 Sobic009G002000 Sobic009G002000 Sobic008G118500--Sobic009G002000 Sobic010G220900 Sobic010G220900 Sobic008G118500--Sobic010G220900 Sobic001G469200 Sobic001G469200 Sobic008G118500--Sobic001G469200 Sobic001G291800 Sobic001G291800 Sobic008G118500--Sobic001G291800 Sobic008G118500--Sobic009G258400 Sobic001G346300 Sobic001G346300 Sobic008G118500--Sobic001G346300 Sobic004G091200--Sobic009G258400 Sobic001G005600 Sobic001G005600 Sobic004G091200--Sobic001G005600 Sobic003G005200 Sobic003G005200 Sobic004G091200--Sobic003G005200 Sobic010G129600 Sobic010G129600 Sobic004G091200--Sobic010G129600 Sobic001G473600 Sobic001G473600 Sobic004G091200--Sobic001G473600 Sobic004G091200--Sobic001G114500 Sobic002G105200 Sobic002G105200 Sobic004G091200--Sobic002G105200 Sobic003G201900 Sobic003G201900 Sobic004G091200--Sobic003G201900 Sobic003G038600 Sobic003G038600 Sobic004G091200--Sobic003G038600 Sobic007G039400--Sobic001G291800 Sobic009G138700 Sobic009G138700 Sobic007G039400--Sobic009G138700 Sobic001G259000 Sobic001G259000 Sobic007G039400--Sobic001G259000 Sobic001G145400 Sobic001G145400 Sobic007G039400--Sobic001G145400 Sobic004G340400 Sobic004G340400 Sobic007G039400--Sobic004G340400 Sobic010G007100 Sobic010G007100 Sobic007G039400--Sobic010G007100 Sobic004G353000 Sobic004G353000 Sobic007G039400--Sobic004G353000 Sobic010G176500 Sobic010G176500 Sobic007G039400--Sobic010G176500 Sobic004G033600 Sobic004G033600 Sobic007G039400--Sobic004G033600 Sobic008G103300--Sobic008G055900 Sobic002G371700 Sobic002G371700 Sobic008G103300--Sobic002G371700 Sobic008G103300--Sobic003G046300 Sobic003G132000 Sobic003G132000 Sobic008G103300--Sobic003G132000 Sobic005G074500 Sobic005G074500 Sobic008G103300--Sobic005G074500 Sobic008G103300--Sobic001G114500 Sobic008G103300--Sobic001G145400 Sobic006G200700 Sobic006G200700 Sobic008G103300--Sobic006G200700 Sobic002G295500 Sobic002G295500 Sobic008G103300--Sobic002G295500 Sobic009G160600--Sobic001G005600 Sobic001G161900 Sobic001G161900 Sobic009G160600--Sobic001G161900 Sobic003G382900 Sobic003G382900 Sobic009G160600--Sobic003G382900 Sobic004G323700 Sobic004G323700 Sobic009G160600--Sobic004G323700 Sobic009G160600--Sobic003G005200 Sobic003G150900 Sobic003G150900 Sobic009G160600--Sobic003G150900 Sobic009G160600--Sobic010G129600 Sobic007G056500 Sobic007G056500 Sobic009G160600--Sobic007G056500 Sobic001G042200 Sobic001G042200 Sobic009G160600--Sobic001G042200 Sobic001G168900 Sobic001G168900 Sobic009G258400--Sobic001G168900 Sobic006G120800 Sobic006G120800 Sobic009G258400--Sobic006G120800 Sobic009G258400--Sobic004G091200 Sobic009G258400--Sobic001G114500 Sobic009G036200 Sobic009G036200 Sobic009G258400--Sobic009G036200 Sobic002G077900 Sobic002G077900 Sobic009G258400--Sobic002G077900 Sobic009G258400--Sobic001G291800 Sobic009G258400--Sobic003G132000 Sobic001G507400 Sobic001G507400 Sobic009G258400--Sobic001G507400 Sobic001G114500--Sobic003G132000 Sobic003G121300 Sobic003G121300 Sobic001G114500--Sobic003G121300 Sobic001G114500--Sobic008G103300 Sobic009G164000 Sobic009G164000 Sobic001G114500--Sobic009G164000 Sobic001G114500--Sobic001G473600 Sobic007G084100 Sobic007G084100 Sobic001G114500--Sobic007G084100 Sobic005G160400 Sobic005G160400 Sobic001G114500--Sobic005G160400 Sobic001G114500--Sobic009G258400 Sobic004G156800 Sobic004G156800 Sobic001G114500--Sobic004G156800
Octagon: transcription factors


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